Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G05250

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0015979: photosynthesis7.06E-12
2GO:0009768: photosynthesis, light harvesting in photosystem I2.40E-08
3GO:0009773: photosynthetic electron transport in photosystem I6.07E-07
4GO:0090391: granum assembly6.57E-07
5GO:0018298: protein-chromophore linkage6.97E-07
6GO:0010218: response to far red light8.72E-07
7GO:0009637: response to blue light1.19E-06
8GO:0010114: response to red light2.10E-06
9GO:0010196: nonphotochemical quenching1.59E-05
10GO:0032544: plastid translation2.72E-05
11GO:0009735: response to cytokinin4.39E-05
12GO:0080093: regulation of photorespiration5.34E-05
13GO:0031998: regulation of fatty acid beta-oxidation5.34E-05
14GO:0042254: ribosome biogenesis6.29E-05
15GO:0006810: transport7.50E-05
16GO:0019253: reductive pentose-phosphate cycle9.37E-05
17GO:0008616: queuosine biosynthetic process1.30E-04
18GO:0010275: NAD(P)H dehydrogenase complex assembly1.30E-04
19GO:0006518: peptide metabolic process2.22E-04
20GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis3.25E-04
21GO:0006546: glycine catabolic process4.35E-04
22GO:0019464: glycine decarboxylation via glycine cleavage system4.35E-04
23GO:0009765: photosynthesis, light harvesting4.35E-04
24GO:0006097: glyoxylate cycle5.52E-04
25GO:0006656: phosphatidylcholine biosynthetic process5.52E-04
26GO:0043097: pyrimidine nucleoside salvage5.52E-04
27GO:0050665: hydrogen peroxide biosynthetic process6.76E-04
28GO:0006206: pyrimidine nucleobase metabolic process6.76E-04
29GO:0009854: oxidative photosynthetic carbon pathway8.05E-04
30GO:0009645: response to low light intensity stimulus9.40E-04
31GO:0045454: cell redox homeostasis1.04E-03
32GO:0009642: response to light intensity1.08E-03
33GO:0006412: translation1.14E-03
34GO:0010206: photosystem II repair1.38E-03
35GO:0006783: heme biosynthetic process1.38E-03
36GO:0009245: lipid A biosynthetic process1.38E-03
37GO:0006779: porphyrin-containing compound biosynthetic process1.54E-03
38GO:0006782: protoporphyrinogen IX biosynthetic process1.71E-03
39GO:0043085: positive regulation of catalytic activity1.88E-03
40GO:0018119: peptidyl-cysteine S-nitrosylation1.88E-03
41GO:0009698: phenylpropanoid metabolic process1.88E-03
42GO:0006108: malate metabolic process2.25E-03
43GO:0006006: glucose metabolic process2.25E-03
44GO:0009767: photosynthetic electron transport chain2.25E-03
45GO:0010207: photosystem II assembly2.43E-03
46GO:0000413: protein peptidyl-prolyl isomerization4.60E-03
47GO:0042335: cuticle development4.60E-03
48GO:0006662: glycerol ether metabolic process4.84E-03
49GO:0010027: thylakoid membrane organization7.22E-03
50GO:0009627: systemic acquired resistance7.79E-03
51GO:0006950: response to stress8.09E-03
52GO:0015995: chlorophyll biosynthetic process8.09E-03
53GO:0016311: dephosphorylation8.38E-03
54GO:0007568: aging9.61E-03
55GO:0034599: cellular response to oxidative stress1.06E-02
56GO:0006099: tricarboxylic acid cycle1.06E-02
57GO:0009644: response to high light intensity1.30E-02
58GO:0006812: cation transport1.44E-02
59GO:0009416: response to light stimulus1.66E-02
60GO:0006096: glycolytic process1.70E-02
61GO:0009058: biosynthetic process2.37E-02
62GO:0006633: fatty acid biosynthetic process2.68E-02
63GO:0042742: defense response to bacterium3.36E-02
64GO:0006979: response to oxidative stress3.38E-02
65GO:0055114: oxidation-reduction process3.51E-02
66GO:0009658: chloroplast organization3.91E-02
67GO:0009409: response to cold4.53E-02
68GO:0080167: response to karrikin4.56E-02
RankGO TermAdjusted P value
1GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
2GO:0008974: phosphoribulokinase activity0.00E+00
3GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
4GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
5GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
6GO:0031409: pigment binding1.47E-08
7GO:0016168: chlorophyll binding4.32E-07
8GO:0000234: phosphoethanolamine N-methyltransferase activity1.30E-04
9GO:0008883: glutamyl-tRNA reductase activity1.30E-04
10GO:0008479: queuine tRNA-ribosyltransferase activity1.30E-04
11GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.30E-04
12GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.30E-04
13GO:0003735: structural constituent of ribosome1.54E-04
14GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.22E-04
15GO:0019843: rRNA binding2.41E-04
16GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.25E-04
17GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.25E-04
18GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.25E-04
19GO:0004375: glycine dehydrogenase (decarboxylating) activity3.25E-04
20GO:0048038: quinone binding3.48E-04
21GO:0008891: glycolate oxidase activity4.35E-04
22GO:0031177: phosphopantetheine binding6.76E-04
23GO:0016615: malate dehydrogenase activity6.76E-04
24GO:0004849: uridine kinase activity8.05E-04
25GO:0000035: acyl binding8.05E-04
26GO:0030060: L-malate dehydrogenase activity8.05E-04
27GO:0003993: acid phosphatase activity8.46E-04
28GO:0050661: NADP binding9.18E-04
29GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.08E-03
30GO:0051537: 2 iron, 2 sulfur cluster binding1.11E-03
31GO:0009055: electron carrier activity1.48E-03
32GO:0008047: enzyme activator activity1.71E-03
33GO:0015035: protein disulfide oxidoreductase activity1.99E-03
34GO:0043424: protein histidine kinase binding3.24E-03
35GO:0047134: protein-disulfide reductase activity4.36E-03
36GO:0004791: thioredoxin-disulfide reductase activity5.09E-03
37GO:0010181: FMN binding5.09E-03
38GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor6.12E-03
39GO:0004222: metalloendopeptidase activity9.30E-03
40GO:0016491: oxidoreductase activity9.64E-03
41GO:0004185: serine-type carboxypeptidase activity1.23E-02
42GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.37E-02
43GO:0051287: NAD binding1.40E-02
44GO:0004252: serine-type endopeptidase activity2.46E-02
45GO:0015297: antiporter activity2.77E-02
46GO:0042802: identical protein binding3.40E-02
47GO:0046872: metal ion binding4.84E-02
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Gene type



Gene DE type