GO Enrichment Analysis of Co-expressed Genes with
AT5G04130
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031081: nuclear pore distribution | 0.00E+00 |
| 2 | GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | 0.00E+00 |
| 3 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 4 | GO:0042255: ribosome assembly | 3.18E-05 |
| 5 | GO:0006264: mitochondrial DNA replication | 6.91E-05 |
| 6 | GO:0033259: plastid DNA replication | 6.91E-05 |
| 7 | GO:0000972: transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery | 6.91E-05 |
| 8 | GO:0033206: meiotic cytokinesis | 6.91E-05 |
| 9 | GO:0006390: transcription from mitochondrial promoter | 6.91E-05 |
| 10 | GO:0009658: chloroplast organization | 1.13E-04 |
| 11 | GO:1901529: positive regulation of anion channel activity | 1.66E-04 |
| 12 | GO:2000071: regulation of defense response by callose deposition | 1.66E-04 |
| 13 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 2.81E-04 |
| 14 | GO:1904278: positive regulation of wax biosynthetic process | 2.81E-04 |
| 15 | GO:0009152: purine ribonucleotide biosynthetic process | 4.06E-04 |
| 16 | GO:0006808: regulation of nitrogen utilization | 5.42E-04 |
| 17 | GO:0006405: RNA export from nucleus | 6.87E-04 |
| 18 | GO:0016131: brassinosteroid metabolic process | 6.87E-04 |
| 19 | GO:0016558: protein import into peroxisome matrix | 6.87E-04 |
| 20 | GO:0010019: chloroplast-nucleus signaling pathway | 9.99E-04 |
| 21 | GO:0000911: cytokinesis by cell plate formation | 9.99E-04 |
| 22 | GO:2000033: regulation of seed dormancy process | 9.99E-04 |
| 23 | GO:0009867: jasmonic acid mediated signaling pathway | 1.12E-03 |
| 24 | GO:0006401: RNA catabolic process | 1.17E-03 |
| 25 | GO:1900056: negative regulation of leaf senescence | 1.17E-03 |
| 26 | GO:0010098: suspensor development | 1.17E-03 |
| 27 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.34E-03 |
| 28 | GO:0009642: response to light intensity | 1.34E-03 |
| 29 | GO:0006353: DNA-templated transcription, termination | 1.34E-03 |
| 30 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 1.34E-03 |
| 31 | GO:0010233: phloem transport | 1.53E-03 |
| 32 | GO:0009965: leaf morphogenesis | 1.59E-03 |
| 33 | GO:0098656: anion transmembrane transport | 1.73E-03 |
| 34 | GO:0006364: rRNA processing | 1.90E-03 |
| 35 | GO:0006298: mismatch repair | 2.14E-03 |
| 36 | GO:0016441: posttranscriptional gene silencing | 2.14E-03 |
| 37 | GO:0006949: syncytium formation | 2.14E-03 |
| 38 | GO:0006325: chromatin organization | 2.14E-03 |
| 39 | GO:0009682: induced systemic resistance | 2.36E-03 |
| 40 | GO:0006302: double-strand break repair | 3.06E-03 |
| 41 | GO:0006541: glutamine metabolic process | 3.06E-03 |
| 42 | GO:0010020: chloroplast fission | 3.06E-03 |
| 43 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.56E-03 |
| 44 | GO:0000027: ribosomal large subunit assembly | 3.81E-03 |
| 45 | GO:0009863: salicylic acid mediated signaling pathway | 3.81E-03 |
| 46 | GO:0010187: negative regulation of seed germination | 3.81E-03 |
| 47 | GO:2000377: regulation of reactive oxygen species metabolic process | 3.81E-03 |
| 48 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.63E-03 |
| 49 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.91E-03 |
| 50 | GO:0008380: RNA splicing | 5.51E-03 |
| 51 | GO:0010118: stomatal movement | 5.80E-03 |
| 52 | GO:0006606: protein import into nucleus | 5.80E-03 |
| 53 | GO:0008033: tRNA processing | 5.80E-03 |
| 54 | GO:0010501: RNA secondary structure unwinding | 5.80E-03 |
| 55 | GO:0009741: response to brassinosteroid | 6.11E-03 |
| 56 | GO:0010268: brassinosteroid homeostasis | 6.11E-03 |
| 57 | GO:0002229: defense response to oomycetes | 7.07E-03 |
| 58 | GO:0006635: fatty acid beta-oxidation | 7.07E-03 |
| 59 | GO:0032502: developmental process | 7.40E-03 |
| 60 | GO:0010090: trichome morphogenesis | 7.73E-03 |
| 61 | GO:0009793: embryo development ending in seed dormancy | 7.82E-03 |
| 62 | GO:0006464: cellular protein modification process | 8.08E-03 |
| 63 | GO:0009828: plant-type cell wall loosening | 8.08E-03 |
| 64 | GO:0010029: regulation of seed germination | 9.50E-03 |
| 65 | GO:0009627: systemic acquired resistance | 9.87E-03 |
| 66 | GO:0016311: dephosphorylation | 1.06E-02 |
| 67 | GO:0006811: ion transport | 1.18E-02 |
| 68 | GO:0010218: response to far red light | 1.18E-02 |
| 69 | GO:0008283: cell proliferation | 1.56E-02 |
| 70 | GO:0031347: regulation of defense response | 1.78E-02 |
| 71 | GO:0006260: DNA replication | 1.78E-02 |
| 72 | GO:0009664: plant-type cell wall organization | 1.83E-02 |
| 73 | GO:0042538: hyperosmotic salinity response | 1.83E-02 |
| 74 | GO:0006096: glycolytic process | 2.17E-02 |
| 75 | GO:0048367: shoot system development | 2.22E-02 |
| 76 | GO:0009620: response to fungus | 2.32E-02 |
| 77 | GO:0009740: gibberellic acid mediated signaling pathway | 2.37E-02 |
| 78 | GO:0006396: RNA processing | 2.52E-02 |
| 79 | GO:0007165: signal transduction | 2.65E-02 |
| 80 | GO:0009737: response to abscisic acid | 2.72E-02 |
| 81 | GO:0009058: biosynthetic process | 3.01E-02 |
| 82 | GO:0040008: regulation of growth | 3.53E-02 |
| 83 | GO:0009739: response to gibberellin | 3.95E-02 |
| 84 | GO:0006470: protein dephosphorylation | 4.01E-02 |
| 85 | GO:0010468: regulation of gene expression | 4.14E-02 |
| 86 | GO:0042742: defense response to bacterium | 4.69E-02 |
| 87 | GO:0009651: response to salt stress | 4.76E-02 |
| 88 | GO:0009826: unidimensional cell growth | 4.84E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 2 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 3 | GO:0004479: methionyl-tRNA formyltransferase activity | 0.00E+00 |
| 4 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 5 | GO:0003922: GMP synthase (glutamine-hydrolyzing) activity | 0.00E+00 |
| 6 | GO:0016901: oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor | 6.91E-05 |
| 7 | GO:0008395: steroid hydroxylase activity | 6.91E-05 |
| 8 | GO:0000175: 3'-5'-exoribonuclease activity | 1.19E-04 |
| 9 | GO:0042389: omega-3 fatty acid desaturase activity | 1.66E-04 |
| 10 | GO:0004809: tRNA (guanine-N2-)-methyltransferase activity | 1.66E-04 |
| 11 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.81E-04 |
| 12 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.81E-04 |
| 13 | GO:0070181: small ribosomal subunit rRNA binding | 2.81E-04 |
| 14 | GO:0003727: single-stranded RNA binding | 3.11E-04 |
| 15 | GO:0008097: 5S rRNA binding | 4.06E-04 |
| 16 | GO:0003723: RNA binding | 4.40E-04 |
| 17 | GO:0008409: 5'-3' exonuclease activity | 5.42E-04 |
| 18 | GO:0000293: ferric-chelate reductase activity | 8.40E-04 |
| 19 | GO:0016462: pyrophosphatase activity | 8.40E-04 |
| 20 | GO:0017056: structural constituent of nuclear pore | 1.34E-03 |
| 21 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 1.53E-03 |
| 22 | GO:0000989: transcription factor activity, transcription factor binding | 1.73E-03 |
| 23 | GO:0030955: potassium ion binding | 1.93E-03 |
| 24 | GO:0004743: pyruvate kinase activity | 1.93E-03 |
| 25 | GO:0005487: nucleocytoplasmic transporter activity | 1.93E-03 |
| 26 | GO:0009982: pseudouridine synthase activity | 2.82E-03 |
| 27 | GO:0005315: inorganic phosphate transmembrane transporter activity | 2.82E-03 |
| 28 | GO:0008026: ATP-dependent helicase activity | 2.85E-03 |
| 29 | GO:0008266: poly(U) RNA binding | 3.06E-03 |
| 30 | GO:0019843: rRNA binding | 3.36E-03 |
| 31 | GO:0003887: DNA-directed DNA polymerase activity | 3.56E-03 |
| 32 | GO:0008408: 3'-5' exonuclease activity | 4.35E-03 |
| 33 | GO:0004540: ribonuclease activity | 4.35E-03 |
| 34 | GO:0008514: organic anion transmembrane transporter activity | 5.20E-03 |
| 35 | GO:0004527: exonuclease activity | 6.11E-03 |
| 36 | GO:0048038: quinone binding | 7.07E-03 |
| 37 | GO:0003684: damaged DNA binding | 8.08E-03 |
| 38 | GO:0016791: phosphatase activity | 8.08E-03 |
| 39 | GO:0004004: ATP-dependent RNA helicase activity | 1.02E-02 |
| 40 | GO:0004722: protein serine/threonine phosphatase activity | 1.16E-02 |
| 41 | GO:0003993: acid phosphatase activity | 1.34E-02 |
| 42 | GO:0046983: protein dimerization activity | 1.51E-02 |
| 43 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.92E-02 |
| 44 | GO:0003690: double-stranded DNA binding | 1.97E-02 |
| 45 | GO:0004650: polygalacturonase activity | 2.32E-02 |
| 46 | GO:0016874: ligase activity | 2.37E-02 |
| 47 | GO:0003735: structural constituent of ribosome | 2.50E-02 |
| 48 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.96E-02 |
| 49 | GO:0016829: lyase activity | 3.07E-02 |
| 50 | GO:0015144: carbohydrate transmembrane transporter activity | 3.30E-02 |
| 51 | GO:0005351: sugar:proton symporter activity | 3.59E-02 |
| 52 | GO:0008168: methyltransferase activity | 4.84E-02 |
| 53 | GO:0000287: magnesium ion binding | 4.91E-02 |
| 54 | GO:0004601: peroxidase activity | 4.97E-02 |