GO Enrichment Analysis of Co-expressed Genes with
AT5G03640
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 2 | GO:0009606: tropism | 0.00E+00 |
| 3 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 4 | GO:0080127: fruit septum development | 0.00E+00 |
| 5 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 6 | GO:0045014: negative regulation of transcription by glucose | 0.00E+00 |
| 7 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 8 | GO:0042793: transcription from plastid promoter | 6.54E-07 |
| 9 | GO:0046620: regulation of organ growth | 2.86E-06 |
| 10 | GO:0009733: response to auxin | 3.36E-06 |
| 11 | GO:0009734: auxin-activated signaling pathway | 4.20E-06 |
| 12 | GO:0009913: epidermal cell differentiation | 6.98E-05 |
| 13 | GO:0009416: response to light stimulus | 7.23E-05 |
| 14 | GO:0006353: DNA-templated transcription, termination | 1.64E-04 |
| 15 | GO:0042255: ribosome assembly | 1.64E-04 |
| 16 | GO:1903866: palisade mesophyll development | 2.00E-04 |
| 17 | GO:0048829: root cap development | 3.48E-04 |
| 18 | GO:1900033: negative regulation of trichome patterning | 4.48E-04 |
| 19 | GO:0080009: mRNA methylation | 4.48E-04 |
| 20 | GO:2000123: positive regulation of stomatal complex development | 4.48E-04 |
| 21 | GO:0010569: regulation of double-strand break repair via homologous recombination | 4.48E-04 |
| 22 | GO:0010588: cotyledon vascular tissue pattern formation | 5.25E-04 |
| 23 | GO:0090391: granum assembly | 7.29E-04 |
| 24 | GO:0009926: auxin polar transport | 7.78E-04 |
| 25 | GO:0080147: root hair cell development | 8.13E-04 |
| 26 | GO:0003333: amino acid transmembrane transport | 9.79E-04 |
| 27 | GO:0016556: mRNA modification | 1.04E-03 |
| 28 | GO:1902290: positive regulation of defense response to oomycetes | 1.04E-03 |
| 29 | GO:0009658: chloroplast organization | 1.16E-03 |
| 30 | GO:2000038: regulation of stomatal complex development | 1.38E-03 |
| 31 | GO:0048629: trichome patterning | 1.38E-03 |
| 32 | GO:0006221: pyrimidine nucleotide biosynthetic process | 1.38E-03 |
| 33 | GO:0010305: leaf vascular tissue pattern formation | 1.58E-03 |
| 34 | GO:0080110: sporopollenin biosynthetic process | 1.76E-03 |
| 35 | GO:0016131: brassinosteroid metabolic process | 1.76E-03 |
| 36 | GO:0048497: maintenance of floral organ identity | 1.76E-03 |
| 37 | GO:0010375: stomatal complex patterning | 1.76E-03 |
| 38 | GO:0048825: cotyledon development | 1.82E-03 |
| 39 | GO:1902456: regulation of stomatal opening | 2.17E-03 |
| 40 | GO:0003006: developmental process involved in reproduction | 2.17E-03 |
| 41 | GO:0009643: photosynthetic acclimation | 2.17E-03 |
| 42 | GO:0016554: cytidine to uridine editing | 2.17E-03 |
| 43 | GO:0010315: auxin efflux | 2.17E-03 |
| 44 | GO:0009828: plant-type cell wall loosening | 2.35E-03 |
| 45 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 2.60E-03 |
| 46 | GO:0010310: regulation of hydrogen peroxide metabolic process | 2.60E-03 |
| 47 | GO:0015937: coenzyme A biosynthetic process | 3.06E-03 |
| 48 | GO:0010103: stomatal complex morphogenesis | 3.06E-03 |
| 49 | GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway | 3.06E-03 |
| 50 | GO:0040008: regulation of growth | 3.30E-03 |
| 51 | GO:0048766: root hair initiation | 3.55E-03 |
| 52 | GO:0019430: removal of superoxide radicals | 4.06E-03 |
| 53 | GO:0032544: plastid translation | 4.06E-03 |
| 54 | GO:0007389: pattern specification process | 4.06E-03 |
| 55 | GO:0007186: G-protein coupled receptor signaling pathway | 4.06E-03 |
| 56 | GO:0006865: amino acid transport | 4.41E-03 |
| 57 | GO:0048589: developmental growth | 4.60E-03 |
| 58 | GO:0048507: meristem development | 4.60E-03 |
| 59 | GO:1900426: positive regulation of defense response to bacterium | 5.15E-03 |
| 60 | GO:1900865: chloroplast RNA modification | 5.15E-03 |
| 61 | GO:0006535: cysteine biosynthetic process from serine | 5.74E-03 |
| 62 | GO:0006949: syncytium formation | 5.74E-03 |
| 63 | GO:0031627: telomeric loop formation | 5.74E-03 |
| 64 | GO:0009750: response to fructose | 6.34E-03 |
| 65 | GO:0046856: phosphatidylinositol dephosphorylation | 6.34E-03 |
| 66 | GO:0010582: floral meristem determinacy | 6.96E-03 |
| 67 | GO:0010152: pollen maturation | 6.96E-03 |
| 68 | GO:0009664: plant-type cell wall organization | 7.46E-03 |
| 69 | GO:0009691: cytokinin biosynthetic process | 7.61E-03 |
| 70 | GO:0010102: lateral root morphogenesis | 7.61E-03 |
| 71 | GO:0006270: DNA replication initiation | 8.28E-03 |
| 72 | GO:0048467: gynoecium development | 8.28E-03 |
| 73 | GO:0010020: chloroplast fission | 8.28E-03 |
| 74 | GO:0080188: RNA-directed DNA methylation | 8.97E-03 |
| 75 | GO:0048367: shoot system development | 9.79E-03 |
| 76 | GO:2000377: regulation of reactive oxygen species metabolic process | 1.04E-02 |
| 77 | GO:0019344: cysteine biosynthetic process | 1.04E-02 |
| 78 | GO:0006825: copper ion transport | 1.12E-02 |
| 79 | GO:0019953: sexual reproduction | 1.12E-02 |
| 80 | GO:0006874: cellular calcium ion homeostasis | 1.12E-02 |
| 81 | GO:0016042: lipid catabolic process | 1.27E-02 |
| 82 | GO:0010082: regulation of root meristem growth | 1.35E-02 |
| 83 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.35E-02 |
| 84 | GO:0010584: pollen exine formation | 1.43E-02 |
| 85 | GO:0048443: stamen development | 1.43E-02 |
| 86 | GO:0006284: base-excision repair | 1.43E-02 |
| 87 | GO:0009845: seed germination | 1.55E-02 |
| 88 | GO:0080022: primary root development | 1.60E-02 |
| 89 | GO:0008033: tRNA processing | 1.60E-02 |
| 90 | GO:0010087: phloem or xylem histogenesis | 1.60E-02 |
| 91 | GO:0010118: stomatal movement | 1.60E-02 |
| 92 | GO:0009790: embryo development | 1.67E-02 |
| 93 | GO:0009958: positive gravitropism | 1.69E-02 |
| 94 | GO:0009741: response to brassinosteroid | 1.69E-02 |
| 95 | GO:0010268: brassinosteroid homeostasis | 1.69E-02 |
| 96 | GO:0071472: cellular response to salt stress | 1.69E-02 |
| 97 | GO:0007018: microtubule-based movement | 1.78E-02 |
| 98 | GO:0009749: response to glucose | 1.87E-02 |
| 99 | GO:0009851: auxin biosynthetic process | 1.87E-02 |
| 100 | GO:0080156: mitochondrial mRNA modification | 1.97E-02 |
| 101 | GO:0009451: RNA modification | 2.03E-02 |
| 102 | GO:0010583: response to cyclopentenone | 2.06E-02 |
| 103 | GO:0019761: glucosinolate biosynthetic process | 2.06E-02 |
| 104 | GO:0032502: developmental process | 2.06E-02 |
| 105 | GO:0009630: gravitropism | 2.06E-02 |
| 106 | GO:0010252: auxin homeostasis | 2.25E-02 |
| 107 | GO:0007267: cell-cell signaling | 2.35E-02 |
| 108 | GO:0008380: RNA splicing | 2.37E-02 |
| 109 | GO:0010027: thylakoid membrane organization | 2.55E-02 |
| 110 | GO:0009826: unidimensional cell growth | 2.95E-02 |
| 111 | GO:0048481: plant ovule development | 3.09E-02 |
| 112 | GO:0048767: root hair elongation | 3.20E-02 |
| 113 | GO:0045893: positive regulation of transcription, DNA-templated | 3.22E-02 |
| 114 | GO:0006811: ion transport | 3.31E-02 |
| 115 | GO:0016567: protein ubiquitination | 3.87E-02 |
| 116 | GO:0006355: regulation of transcription, DNA-templated | 3.92E-02 |
| 117 | GO:0030001: metal ion transport | 4.01E-02 |
| 118 | GO:0006839: mitochondrial transport | 4.01E-02 |
| 119 | GO:0015979: photosynthesis | 4.33E-02 |
| 120 | GO:0009744: response to sucrose | 4.37E-02 |
| 121 | GO:0045892: negative regulation of transcription, DNA-templated | 4.61E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 2 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 3 | GO:0052381: tRNA dimethylallyltransferase activity | 2.00E-04 |
| 4 | GO:0008395: steroid hydroxylase activity | 2.00E-04 |
| 5 | GO:0004016: adenylate cyclase activity | 2.00E-04 |
| 6 | GO:0004632: phosphopantothenate--cysteine ligase activity | 2.00E-04 |
| 7 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 2.00E-04 |
| 8 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 4.48E-04 |
| 9 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 4.48E-04 |
| 10 | GO:0004519: endonuclease activity | 7.16E-04 |
| 11 | GO:0009041: uridylate kinase activity | 1.04E-03 |
| 12 | GO:0003727: single-stranded RNA binding | 1.26E-03 |
| 13 | GO:0004930: G-protein coupled receptor activity | 1.38E-03 |
| 14 | GO:0010011: auxin binding | 1.38E-03 |
| 15 | GO:0010328: auxin influx transmembrane transporter activity | 1.38E-03 |
| 16 | GO:0008725: DNA-3-methyladenine glycosylase activity | 1.76E-03 |
| 17 | GO:0019901: protein kinase binding | 1.82E-03 |
| 18 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 2.17E-03 |
| 19 | GO:0003688: DNA replication origin binding | 2.17E-03 |
| 20 | GO:0004784: superoxide dismutase activity | 2.17E-03 |
| 21 | GO:0019843: rRNA binding | 2.33E-03 |
| 22 | GO:0003723: RNA binding | 2.38E-03 |
| 23 | GO:0004124: cysteine synthase activity | 2.60E-03 |
| 24 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.74E-03 |
| 25 | GO:0003677: DNA binding | 4.21E-03 |
| 26 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 4.59E-03 |
| 27 | GO:0009672: auxin:proton symporter activity | 5.15E-03 |
| 28 | GO:0016788: hydrolase activity, acting on ester bonds | 6.24E-03 |
| 29 | GO:0003691: double-stranded telomeric DNA binding | 6.34E-03 |
| 30 | GO:0043621: protein self-association | 6.43E-03 |
| 31 | GO:0015293: symporter activity | 6.68E-03 |
| 32 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.96E-03 |
| 33 | GO:0003725: double-stranded RNA binding | 7.61E-03 |
| 34 | GO:0010329: auxin efflux transmembrane transporter activity | 7.61E-03 |
| 35 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 8.28E-03 |
| 36 | GO:0003690: double-stranded DNA binding | 8.29E-03 |
| 37 | GO:0015171: amino acid transmembrane transporter activity | 8.87E-03 |
| 38 | GO:0005217: intracellular ligand-gated ion channel activity | 8.97E-03 |
| 39 | GO:0004970: ionotropic glutamate receptor activity | 8.97E-03 |
| 40 | GO:0052689: carboxylic ester hydrolase activity | 9.11E-03 |
| 41 | GO:0004871: signal transducer activity | 1.07E-02 |
| 42 | GO:0030570: pectate lyase activity | 1.35E-02 |
| 43 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.47E-02 |
| 44 | GO:0001085: RNA polymerase II transcription factor binding | 1.69E-02 |
| 45 | GO:0050662: coenzyme binding | 1.78E-02 |
| 46 | GO:0008289: lipid binding | 2.00E-02 |
| 47 | GO:0004518: nuclease activity | 2.06E-02 |
| 48 | GO:0005200: structural constituent of cytoskeleton | 2.35E-02 |
| 49 | GO:0051213: dioxygenase activity | 2.55E-02 |
| 50 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 3.31E-02 |
| 51 | GO:0004222: metalloendopeptidase activity | 3.31E-02 |
| 52 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.42E-02 |
| 53 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.65E-02 |
| 54 | GO:0043565: sequence-specific DNA binding | 3.75E-02 |
| 55 | GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting | 4.54E-02 |