co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT5G02160

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
2	GO:1901401: regulation of tetrapyrrole metabolic process	0.00E+00
3	GO:0015979: photosynthesis	4.35E-21
4	GO:0015995: chlorophyll biosynthetic process	2.69E-17
5	GO:0032544: plastid translation	1.78E-09
6	GO:0009768: photosynthesis, light harvesting in photosystem I	1.71E-07
7	GO:0009735: response to cytokinin	1.93E-07
8	GO:0018298: protein-chromophore linkage	3.84E-07
9	GO:0006412: translation	5.76E-07
10	GO:0009773: photosynthetic electron transport in photosystem I	1.07E-06
11	GO:0030388: fructose 1,6-bisphosphate metabolic process	5.13E-06
12	GO:0010275: NAD(P)H dehydrogenase complex assembly	5.13E-06
13	GO:0009645: response to low light intensity stimulus	7.00E-06
14	GO:0006000: fructose metabolic process	1.82E-05
15	GO:0006783: heme biosynthetic process	2.09E-05
16	GO:0042254: ribosome biogenesis	2.29E-05
17	GO:0019252: starch biosynthetic process	3.39E-05
18	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	4.01E-05
19	GO:0006810: transport	4.39E-05
20	GO:0006094: gluconeogenesis	7.09E-05
21	GO:0010600: regulation of auxin biosynthetic process	7.15E-05
22	GO:0010021: amylopectin biosynthetic process	7.15E-05
23	GO:0010207: photosystem II assembly	8.58E-05
24	GO:0055114: oxidation-reduction process	1.50E-04
25	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.20E-04
26	GO:0010189: vitamin E biosynthetic process	2.20E-04
27	GO:0009854: oxidative photosynthetic carbon pathway	2.20E-04
28	GO:0043953: protein transport by the Tat complex	3.37E-04
29	GO:1904966: positive regulation of vitamin E biosynthetic process	3.37E-04
30	GO:1904964: positive regulation of phytol biosynthetic process	3.37E-04
31	GO:0065002: intracellular protein transmembrane transport	3.37E-04
32	GO:0080093: regulation of photorespiration	3.37E-04
33	GO:0031998: regulation of fatty acid beta-oxidation	3.37E-04
34	GO:0034337: RNA folding	3.37E-04
35	GO:0048564: photosystem I assembly	3.60E-04
36	GO:0010928: regulation of auxin mediated signaling pathway	3.60E-04
37	GO:0006002: fructose 6-phosphate metabolic process	4.41E-04
38	GO:0071482: cellular response to light stimulus	4.41E-04
39	GO:0032259: methylation	5.33E-04
40	GO:0006779: porphyrin-containing compound biosynthetic process	6.25E-04
41	GO:0006782: protoporphyrinogen IX biosynthetic process	7.29E-04
42	GO:1902326: positive regulation of chlorophyll biosynthetic process	7.34E-04
43	GO:0071457: cellular response to ozone	7.34E-04
44	GO:0000256: allantoin catabolic process	7.34E-04
45	GO:0008616: queuosine biosynthetic process	7.34E-04
46	GO:0006729: tetrahydrobiopterin biosynthetic process	7.34E-04
47	GO:0010027: thylakoid membrane organization	7.75E-04
48	GO:0009658: chloroplast organization	8.15E-04
49	GO:0018119: peptidyl-cysteine S-nitrosylation	8.40E-04
50	GO:0009767: photosynthetic electron transport chain	1.08E-03
51	GO:0005986: sucrose biosynthetic process	1.08E-03
52	GO:0090391: granum assembly	1.19E-03
53	GO:0006518: peptide metabolic process	1.19E-03
54	GO:0010136: ureide catabolic process	1.19E-03
55	GO:0044375: regulation of peroxisome size	1.19E-03
56	GO:0005977: glycogen metabolic process	1.19E-03
57	GO:0019253: reductive pentose-phosphate cycle	1.22E-03
58	GO:0010218: response to far red light	1.22E-03
59	GO:0009637: response to blue light	1.45E-03
60	GO:0006241: CTP biosynthetic process	1.71E-03
61	GO:0033014: tetrapyrrole biosynthetic process	1.71E-03
62	GO:0006145: purine nucleobase catabolic process	1.71E-03
63	GO:0006165: nucleoside diphosphate phosphorylation	1.71E-03
64	GO:0010731: protein glutathionylation	1.71E-03
65	GO:0006228: UTP biosynthetic process	1.71E-03
66	GO:1901332: negative regulation of lateral root development	1.71E-03
67	GO:0006986: response to unfolded protein	1.71E-03
68	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	1.71E-03
69	GO:2001141: regulation of RNA biosynthetic process	1.71E-03
70	GO:0071484: cellular response to light intensity	1.71E-03
71	GO:0051085: chaperone mediated protein folding requiring cofactor	1.71E-03
72	GO:0010114: response to red light	2.01E-03
73	GO:0009644: response to high light intensity	2.22E-03
74	GO:0019748: secondary metabolic process	2.23E-03
75	GO:0009765: photosynthesis, light harvesting	2.30E-03
76	GO:0006109: regulation of carbohydrate metabolic process	2.30E-03
77	GO:0006183: GTP biosynthetic process	2.30E-03
78	GO:0045727: positive regulation of translation	2.30E-03
79	GO:0015994: chlorophyll metabolic process	2.30E-03
80	GO:0006536: glutamate metabolic process	2.30E-03
81	GO:0015976: carbon utilization	2.30E-03
82	GO:0071486: cellular response to high light intensity	2.30E-03
83	GO:0042742: defense response to bacterium	2.34E-03
84	GO:0000304: response to singlet oxygen	2.93E-03
85	GO:0071493: cellular response to UV-B	2.93E-03
86	GO:0009585: red, far-red light phototransduction	2.93E-03
87	GO:0006656: phosphatidylcholine biosynthetic process	2.93E-03
88	GO:0043097: pyrimidine nucleoside salvage	2.93E-03
89	GO:0010236: plastoquinone biosynthetic process	2.93E-03
90	GO:0006097: glyoxylate cycle	2.93E-03
91	GO:0009107: lipoate biosynthetic process	2.93E-03
92	GO:0010190: cytochrome b6f complex assembly	3.63E-03
93	GO:0006206: pyrimidine nucleobase metabolic process	3.63E-03
94	GO:0050665: hydrogen peroxide biosynthetic process	3.63E-03
95	GO:0042549: photosystem II stabilization	3.63E-03
96	GO:1901259: chloroplast rRNA processing	4.37E-03
97	GO:0010196: nonphotochemical quenching	5.15E-03
98	GO:1900057: positive regulation of leaf senescence	5.15E-03
99	GO:0010161: red light signaling pathway	5.15E-03
100	GO:0009772: photosynthetic electron transport in photosystem II	5.15E-03
101	GO:0005978: glycogen biosynthetic process	5.99E-03
102	GO:0009642: response to light intensity	5.99E-03
103	GO:0009704: de-etiolation	5.99E-03
104	GO:0016559: peroxisome fission	5.99E-03
105	GO:0019430: removal of superoxide radicals	6.87E-03
106	GO:0006526: arginine biosynthetic process	6.87E-03
107	GO:0006754: ATP biosynthetic process	7.79E-03
108	GO:0005982: starch metabolic process	8.75E-03
109	GO:0009853: photorespiration	9.89E-03
110	GO:0034599: cellular response to oxidative stress	1.03E-02
111	GO:0019684: photosynthesis, light reaction	1.08E-02
112	GO:0043085: positive regulation of catalytic activity	1.08E-02
113	GO:0006352: DNA-templated transcription, initiation	1.08E-02
114	GO:0009750: response to fructose	1.08E-02
115	GO:0005983: starch catabolic process	1.19E-02
116	GO:0006807: nitrogen compound metabolic process	1.30E-02
117	GO:0006108: malate metabolic process	1.30E-02
118	GO:0009409: response to cold	1.31E-02
119	GO:0009266: response to temperature stimulus	1.42E-02
120	GO:0007031: peroxisome organization	1.54E-02
121	GO:0005975: carbohydrate metabolic process	1.63E-02
122	GO:0006636: unsaturated fatty acid biosynthetic process	1.66E-02
123	GO:0019762: glucosinolate catabolic process	1.66E-02
124	GO:0006364: rRNA processing	1.73E-02
125	GO:0000027: ribosomal large subunit assembly	1.79E-02
126	GO:0061077: chaperone-mediated protein folding	2.05E-02
127	GO:0031408: oxylipin biosynthetic process	2.05E-02
128	GO:0010017: red or far-red light signaling pathway	2.19E-02
129	GO:0016226: iron-sulfur cluster assembly	2.19E-02
130	GO:0009693: ethylene biosynthetic process	2.33E-02
131	GO:0009411: response to UV	2.33E-02
132	GO:0009625: response to insect	2.33E-02
133	GO:0009561: megagametogenesis	2.47E-02
134	GO:0045454: cell redox homeostasis	2.65E-02
135	GO:0042631: cellular response to water deprivation	2.77E-02
136	GO:0000413: protein peptidyl-prolyl isomerization	2.77E-02
137	GO:0006606: protein import into nucleus	2.77E-02
138	GO:0006520: cellular amino acid metabolic process	2.92E-02
139	GO:0071472: cellular response to salt stress	2.92E-02
140	GO:0006662: glycerol ether metabolic process	2.92E-02
141	GO:0015986: ATP synthesis coupled proton transport	3.07E-02
142	GO:0000302: response to reactive oxygen species	3.39E-02
143	GO:0006633: fatty acid biosynthetic process	3.86E-02
144	GO:0009567: double fertilization forming a zygote and endosperm	3.88E-02
145	GO:0042128: nitrate assimilation	4.76E-02
146	GO:0006950: response to stress	4.94E-02

Rank	GO Term	Adjusted P value
1	GO:0033728: divinyl chlorophyllide a 8-vinyl-reductase activity	0.00E+00
2	GO:0090711: FMN hydrolase activity	0.00E+00
3	GO:0071522: ureidoglycine aminohydrolase activity	0.00E+00
4	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
5	GO:0045550: geranylgeranyl reductase activity	0.00E+00
6	GO:0051744: 3,8-divinyl protochlorophyllide a 8-vinyl reductase activity	0.00E+00
7	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
8	GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors	0.00E+00
9	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
10	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
11	GO:0008974: phosphoribulokinase activity	0.00E+00
12	GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity	0.00E+00
13	GO:0008465: glycerate dehydrogenase activity	0.00E+00
14	GO:0046408: chlorophyll synthetase activity	0.00E+00
15	GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity	0.00E+00
16	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
17	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
18	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
19	GO:0019843: rRNA binding	3.59E-13
20	GO:0003735: structural constituent of ribosome	4.41E-10
21	GO:0031409: pigment binding	9.43E-08
22	GO:0016168: chlorophyll binding	1.94E-07
23	GO:0016851: magnesium chelatase activity	2.00E-07
24	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	5.13E-06
25	GO:0016630: protochlorophyllide reductase activity	5.13E-06
26	GO:0048038: quinone binding	3.88E-05
27	GO:0031072: heat shock protein binding	7.09E-05
28	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	7.15E-05
29	GO:0008266: poly(U) RNA binding	8.58E-05
30	GO:0005528: FK506 binding	1.41E-04
31	GO:0016776: phosphotransferase activity, phosphate group as acceptor	3.37E-04
32	GO:0004325: ferrochelatase activity	3.37E-04
33	GO:0004853: uroporphyrinogen decarboxylase activity	3.37E-04
34	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	3.37E-04
35	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	3.37E-04
36	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	3.37E-04
37	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.84E-04
38	GO:0030234: enzyme regulator activity	7.29E-04
39	GO:0008479: queuine tRNA-ribosyltransferase activity	7.34E-04
40	GO:0018708: thiol S-methyltransferase activity	7.34E-04
41	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	7.34E-04
42	GO:0003844: 1,4-alpha-glucan branching enzyme activity	7.34E-04
43	GO:0019156: isoamylase activity	7.34E-04
44	GO:0000234: phosphoethanolamine N-methyltransferase activity	7.34E-04
45	GO:0008883: glutamyl-tRNA reductase activity	7.34E-04
46	GO:0047746: chlorophyllase activity	7.34E-04
47	GO:0042389: omega-3 fatty acid desaturase activity	7.34E-04
48	GO:0009977: proton motive force dependent protein transmembrane transporter activity	7.34E-04
49	GO:0008168: methyltransferase activity	7.63E-04
50	GO:0051082: unfolded protein binding	8.28E-04
51	GO:0043169: cation binding	1.19E-03
52	GO:0016992: lipoate synthase activity	1.19E-03
53	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.19E-03
54	GO:0016491: oxidoreductase activity	1.41E-03
55	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.71E-03
56	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	1.71E-03
57	GO:0004550: nucleoside diphosphate kinase activity	1.71E-03
58	GO:0008097: 5S rRNA binding	1.71E-03
59	GO:0004351: glutamate decarboxylase activity	1.71E-03
60	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	1.71E-03
61	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	1.71E-03
62	GO:0008453: alanine-glyoxylate transaminase activity	2.30E-03
63	GO:0016987: sigma factor activity	2.30E-03
64	GO:0009011: starch synthase activity	2.30E-03
65	GO:0004607: phosphatidylcholine-sterol O-acyltransferase activity	2.30E-03
66	GO:0043495: protein anchor	2.30E-03
67	GO:0008891: glycolate oxidase activity	2.30E-03
68	GO:0001053: plastid sigma factor activity	2.30E-03
69	GO:0042802: identical protein binding	2.73E-03
70	GO:0008374: O-acyltransferase activity	2.93E-03
71	GO:0003959: NADPH dehydrogenase activity	2.93E-03
72	GO:0004332: fructose-bisphosphate aldolase activity	3.63E-03
73	GO:0004130: cytochrome-c peroxidase activity	3.63E-03
74	GO:0004784: superoxide dismutase activity	3.63E-03
75	GO:0004556: alpha-amylase activity	3.63E-03
76	GO:0042578: phosphoric ester hydrolase activity	3.63E-03
77	GO:0016615: malate dehydrogenase activity	3.63E-03
78	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	4.37E-03
79	GO:0004849: uridine kinase activity	4.37E-03
80	GO:0030060: L-malate dehydrogenase activity	4.37E-03
81	GO:0051920: peroxiredoxin activity	4.37E-03
82	GO:0005515: protein binding	4.85E-03
83	GO:0019899: enzyme binding	5.15E-03
84	GO:0004033: aldo-keto reductase (NADP) activity	5.99E-03
85	GO:0016209: antioxidant activity	5.99E-03
86	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.87E-03
87	GO:0071949: FAD binding	7.79E-03
88	GO:0004222: metalloendopeptidase activity	8.59E-03
89	GO:0008047: enzyme activator activity	9.76E-03
90	GO:0003746: translation elongation factor activity	9.89E-03
91	GO:0009055: electron carrier activity	1.03E-02
92	GO:0004185: serine-type carboxypeptidase activity	1.28E-02
93	GO:0004565: beta-galactosidase activity	1.30E-02
94	GO:0004089: carbonate dehydratase activity	1.30E-02
95	GO:0051537: 2 iron, 2 sulfur cluster binding	1.38E-02
96	GO:0051287: NAD binding	1.55E-02
97	GO:0004601: peroxidase activity	1.61E-02
98	GO:0051536: iron-sulfur cluster binding	1.79E-02
99	GO:0004857: enzyme inhibitor activity	1.79E-02
100	GO:0043424: protein histidine kinase binding	1.92E-02
101	GO:0051087: chaperone binding	1.92E-02
102	GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups	2.11E-02
103	GO:0022891: substrate-specific transmembrane transporter activity	2.33E-02
104	GO:0047134: protein-disulfide reductase activity	2.62E-02
105	GO:0046933: proton-transporting ATP synthase activity, rotational mechanism	2.92E-02
106	GO:0010181: FMN binding	3.07E-02
107	GO:0050662: coenzyme binding	3.07E-02
108	GO:0004791: thioredoxin-disulfide reductase activity	3.07E-02
109	GO:0016787: hydrolase activity	3.12E-02
110	GO:0046872: metal ion binding	3.37E-02
111	GO:0005507: copper ion binding	3.68E-02
112	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	3.72E-02
113	GO:0004721: phosphoprotein phosphatase activity	4.94E-02