Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT5G01410

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1901918: negative regulation of exoribonuclease activity0.00E+00
2GO:0016553: base conversion or substitution editing0.00E+00
3GO:0033494: ferulate metabolic process0.00E+00
4GO:0090279: regulation of calcium ion import0.00E+00
5GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
6GO:0071474: cellular hyperosmotic response0.00E+00
7GO:0046471: phosphatidylglycerol metabolic process0.00E+00
8GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
9GO:0034337: RNA folding0.00E+00
10GO:0055114: oxidation-reduction process6.07E-10
11GO:0015995: chlorophyll biosynthetic process1.88E-06
12GO:0019252: starch biosynthetic process1.23E-05
13GO:0009658: chloroplast organization4.61E-05
14GO:0009904: chloroplast accumulation movement6.36E-05
15GO:0044550: secondary metabolite biosynthetic process9.72E-05
16GO:0009903: chloroplast avoidance movement1.29E-04
17GO:0016559: peroxisome fission2.16E-04
18GO:0009704: de-etiolation2.16E-04
19GO:0010362: negative regulation of anion channel activity by blue light2.39E-04
20GO:0015969: guanosine tetraphosphate metabolic process2.39E-04
21GO:0046467: membrane lipid biosynthetic process2.39E-04
22GO:1902478: negative regulation of defense response to bacterium, incompatible interaction2.39E-04
23GO:0031426: polycistronic mRNA processing2.39E-04
24GO:0043489: RNA stabilization2.39E-04
25GO:1904966: positive regulation of vitamin E biosynthetic process2.39E-04
26GO:0043953: protein transport by the Tat complex2.39E-04
27GO:0010426: DNA methylation on cytosine within a CHH sequence2.39E-04
28GO:0000481: maturation of 5S rRNA2.39E-04
29GO:1904964: positive regulation of phytol biosynthetic process2.39E-04
30GO:0051775: response to redox state2.39E-04
31GO:0065002: intracellular protein transmembrane transport2.39E-04
32GO:0071277: cellular response to calcium ion2.39E-04
33GO:0043686: co-translational protein modification2.39E-04
34GO:0043087: regulation of GTPase activity2.39E-04
35GO:0071461: cellular response to redox state2.39E-04
36GO:0046167: glycerol-3-phosphate biosynthetic process2.39E-04
37GO:1902458: positive regulation of stomatal opening2.39E-04
38GO:0010027: thylakoid membrane organization4.11E-04
39GO:0030388: fructose 1,6-bisphosphate metabolic process5.29E-04
40GO:0051262: protein tetramerization5.29E-04
41GO:0080005: photosystem stoichiometry adjustment5.29E-04
42GO:1902326: positive regulation of chlorophyll biosynthetic process5.29E-04
43GO:0010541: acropetal auxin transport5.29E-04
44GO:0006650: glycerophospholipid metabolic process5.29E-04
45GO:0010155: regulation of proton transport5.29E-04
46GO:0006729: tetrahydrobiopterin biosynthetic process5.29E-04
47GO:1903426: regulation of reactive oxygen species biosynthetic process5.29E-04
48GO:0005975: carbohydrate metabolic process5.83E-04
49GO:0016024: CDP-diacylglycerol biosynthetic process5.92E-04
50GO:0015979: photosynthesis6.18E-04
51GO:0006094: gluconeogenesis6.71E-04
52GO:0010143: cutin biosynthetic process7.56E-04
53GO:0010207: photosystem II assembly7.56E-04
54GO:0019253: reductive pentose-phosphate cycle7.56E-04
55GO:0009637: response to blue light7.79E-04
56GO:0000913: preprophase band assembly8.60E-04
57GO:0031022: nuclear migration along microfilament8.60E-04
58GO:0006000: fructose metabolic process8.60E-04
59GO:0046168: glycerol-3-phosphate catabolic process8.60E-04
60GO:0034051: negative regulation of plant-type hypersensitive response8.60E-04
61GO:0010160: formation of animal organ boundary8.60E-04
62GO:0044375: regulation of peroxisome size8.60E-04
63GO:0006636: unsaturated fatty acid biosynthetic process9.38E-04
64GO:0009152: purine ribonucleotide biosynthetic process1.23E-03
65GO:0046653: tetrahydrofolate metabolic process1.23E-03
66GO:0006107: oxaloacetate metabolic process1.23E-03
67GO:0010239: chloroplast mRNA processing1.23E-03
68GO:0033014: tetrapyrrole biosynthetic process1.23E-03
69GO:0043481: anthocyanin accumulation in tissues in response to UV light1.23E-03
70GO:0006072: glycerol-3-phosphate metabolic process1.23E-03
71GO:2001141: regulation of RNA biosynthetic process1.23E-03
72GO:0006020: inositol metabolic process1.23E-03
73GO:2000306: positive regulation of photomorphogenesis1.64E-03
74GO:0010600: regulation of auxin biosynthetic process1.64E-03
75GO:0006021: inositol biosynthetic process1.64E-03
76GO:0006734: NADH metabolic process1.64E-03
77GO:0010021: amylopectin biosynthetic process1.64E-03
78GO:0010182: sugar mediated signaling pathway2.03E-03
79GO:0016123: xanthophyll biosynthetic process2.09E-03
80GO:0006564: L-serine biosynthetic process2.09E-03
81GO:0045038: protein import into chloroplast thylakoid membrane2.09E-03
82GO:0031365: N-terminal protein amino acid modification2.09E-03
83GO:0009107: lipoate biosynthetic process2.09E-03
84GO:0009791: post-embryonic development2.34E-03
85GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.57E-03
86GO:0006655: phosphatidylglycerol biosynthetic process2.57E-03
87GO:0060918: auxin transport2.57E-03
88GO:0045962: positive regulation of development, heterochronic2.57E-03
89GO:0009920: cell plate formation involved in plant-type cell wall biogenesis2.57E-03
90GO:0046855: inositol phosphate dephosphorylation2.57E-03
91GO:0042549: photosystem II stabilization2.57E-03
92GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.09E-03
93GO:1901259: chloroplast rRNA processing3.09E-03
94GO:0009772: photosynthetic electron transport in photosystem II3.64E-03
95GO:1900057: positive regulation of leaf senescence3.64E-03
96GO:0010161: red light signaling pathway3.64E-03
97GO:0007155: cell adhesion4.23E-03
98GO:0010928: regulation of auxin mediated signaling pathway4.23E-03
99GO:0032508: DNA duplex unwinding4.23E-03
100GO:0042255: ribosome assembly4.23E-03
101GO:2000070: regulation of response to water deprivation4.23E-03
102GO:0006353: DNA-templated transcription, termination4.23E-03
103GO:0018298: protein-chromophore linkage4.70E-03
104GO:0009932: cell tip growth4.84E-03
105GO:0006002: fructose 6-phosphate metabolic process4.84E-03
106GO:0071482: cellular response to light stimulus4.84E-03
107GO:0015996: chlorophyll catabolic process4.84E-03
108GO:0007186: G-protein coupled receptor signaling pathway4.84E-03
109GO:0009657: plastid organization4.84E-03
110GO:0007623: circadian rhythm4.85E-03
111GO:0006811: ion transport5.18E-03
112GO:0090333: regulation of stomatal closure5.48E-03
113GO:0006783: heme biosynthetic process5.48E-03
114GO:0048507: meristem development5.48E-03
115GO:0006754: ATP biosynthetic process5.48E-03
116GO:0009638: phototropism6.15E-03
117GO:0006779: porphyrin-containing compound biosynthetic process6.15E-03
118GO:0009098: leucine biosynthetic process6.15E-03
119GO:0034599: cellular response to oxidative stress6.23E-03
120GO:0006535: cysteine biosynthetic process from serine6.85E-03
121GO:0009688: abscisic acid biosynthetic process6.85E-03
122GO:0043069: negative regulation of programmed cell death6.85E-03
123GO:0045036: protein targeting to chloroplast6.85E-03
124GO:0009773: photosynthetic electron transport in photosystem I7.58E-03
125GO:0006352: DNA-templated transcription, initiation7.58E-03
126GO:0018119: peptidyl-cysteine S-nitrosylation7.58E-03
127GO:0016485: protein processing7.58E-03
128GO:0010114: response to red light7.68E-03
129GO:0009744: response to sucrose7.68E-03
130GO:0008361: regulation of cell size8.33E-03
131GO:0006790: sulfur compound metabolic process8.33E-03
132GO:0045037: protein import into chloroplast stroma8.33E-03
133GO:0009767: photosynthetic electron transport chain9.11E-03
134GO:0005986: sucrose biosynthetic process9.11E-03
135GO:0009785: blue light signaling pathway9.11E-03
136GO:0006108: malate metabolic process9.11E-03
137GO:0006006: glucose metabolic process9.11E-03
138GO:0018107: peptidyl-threonine phosphorylation9.11E-03
139GO:0009718: anthocyanin-containing compound biosynthetic process9.11E-03
140GO:0009725: response to hormone9.11E-03
141GO:0034605: cellular response to heat9.92E-03
142GO:0010020: chloroplast fission9.92E-03
143GO:0010540: basipetal auxin transport9.92E-03
144GO:0009266: response to temperature stimulus9.92E-03
145GO:0009416: response to light stimulus1.02E-02
146GO:0007031: peroxisome organization1.07E-02
147GO:0042343: indole glucosinolate metabolic process1.07E-02
148GO:0046854: phosphatidylinositol phosphorylation1.07E-02
149GO:0006096: glycolytic process1.23E-02
150GO:0043086: negative regulation of catalytic activity1.23E-02
151GO:0019344: cysteine biosynthetic process1.25E-02
152GO:0008299: isoprenoid biosynthetic process1.34E-02
153GO:0009768: photosynthesis, light harvesting in photosystem I1.34E-02
154GO:0061077: chaperone-mediated protein folding1.43E-02
155GO:0006306: DNA methylation1.43E-02
156GO:0098542: defense response to other organism1.43E-02
157GO:0006396: RNA processing1.52E-02
158GO:0010017: red or far-red light signaling pathway1.53E-02
159GO:0030433: ubiquitin-dependent ERAD pathway1.53E-02
160GO:0019748: secondary metabolic process1.53E-02
161GO:0006817: phosphate ion transport1.72E-02
162GO:0048443: stamen development1.72E-02
163GO:0019722: calcium-mediated signaling1.72E-02
164GO:0009306: protein secretion1.72E-02
165GO:0009408: response to heat1.82E-02
166GO:0009958: positive gravitropism2.03E-02
167GO:0045489: pectin biosynthetic process2.03E-02
168GO:0009741: response to brassinosteroid2.03E-02
169GO:0015986: ATP synthesis coupled proton transport2.14E-02
170GO:0007018: microtubule-based movement2.14E-02
171GO:0010183: pollen tube guidance2.25E-02
172GO:0008654: phospholipid biosynthetic process2.25E-02
173GO:0006633: fatty acid biosynthetic process2.33E-02
174GO:0000302: response to reactive oxygen species2.36E-02
175GO:0007264: small GTPase mediated signal transduction2.47E-02
176GO:0016032: viral process2.47E-02
177GO:0032502: developmental process2.47E-02
178GO:0009567: double fertilization forming a zygote and endosperm2.71E-02
179GO:0009639: response to red or far red light2.71E-02
180GO:0007267: cell-cell signaling2.83E-02
181GO:0000910: cytokinesis2.95E-02
182GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.19E-02
183GO:0042128: nitrate assimilation3.32E-02
184GO:0009735: response to cytokinin3.34E-02
185GO:0000160: phosphorelay signal transduction system3.84E-02
186GO:0009407: toxin catabolic process3.97E-02
187GO:0010218: response to far red light3.97E-02
188GO:0035556: intracellular signal transduction3.99E-02
189GO:0048527: lateral root development4.11E-02
190GO:0010119: regulation of stomatal movement4.11E-02
191GO:0009631: cold acclimation4.11E-02
192GO:0007568: aging4.11E-02
193GO:0006970: response to osmotic stress4.26E-02
194GO:0009853: photorespiration4.39E-02
195GO:0045087: innate immune response4.39E-02
196GO:0016051: carbohydrate biosynthetic process4.39E-02
197GO:0006099: tricarboxylic acid cycle4.53E-02
198GO:0009409: response to cold4.55E-02
199GO:0006631: fatty acid metabolic process4.95E-02
RankGO TermAdjusted P value
1GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
2GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity0.00E+00
3GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
4GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
5GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
6GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
7GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
8GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
9GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
10GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
11GO:0036033: mediator complex binding0.00E+00
12GO:0009011: starch synthase activity2.33E-07
13GO:0016491: oxidoreductase activity2.93E-06
14GO:0010277: chlorophyllide a oxygenase [overall] activity9.64E-06
15GO:0004373: glycogen (starch) synthase activity9.64E-06
16GO:0000293: ferric-chelate reductase activity9.33E-05
17GO:0004366: glycerol-3-phosphate O-acyltransferase activity9.33E-05
18GO:0042802: identical protein binding2.25E-04
19GO:0035671: enone reductase activity2.39E-04
20GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity2.39E-04
21GO:0005227: calcium activated cation channel activity2.39E-04
22GO:0080132: fatty acid alpha-hydroxylase activity2.39E-04
23GO:0004325: ferrochelatase activity2.39E-04
24GO:0008746: NAD(P)+ transhydrogenase activity2.39E-04
25GO:0042586: peptide deformylase activity2.39E-04
26GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity2.39E-04
27GO:0004328: formamidase activity2.39E-04
28GO:0071949: FAD binding3.23E-04
29GO:0004617: phosphoglycerate dehydrogenase activity5.29E-04
30GO:0052832: inositol monophosphate 3-phosphatase activity5.29E-04
31GO:0033201: alpha-1,4-glucan synthase activity5.29E-04
32GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity5.29E-04
33GO:0018708: thiol S-methyltransferase activity5.29E-04
34GO:0008934: inositol monophosphate 1-phosphatase activity5.29E-04
35GO:0052833: inositol monophosphate 4-phosphatase activity5.29E-04
36GO:0008728: GTP diphosphokinase activity5.29E-04
37GO:0003862: 3-isopropylmalate dehydrogenase activity5.29E-04
38GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity5.29E-04
39GO:0048531: beta-1,3-galactosyltransferase activity5.29E-04
40GO:0050017: L-3-cyanoalanine synthase activity5.29E-04
41GO:0080045: quercetin 3'-O-glucosyltransferase activity5.29E-04
42GO:0042389: omega-3 fatty acid desaturase activity5.29E-04
43GO:0009977: proton motive force dependent protein transmembrane transporter activity5.29E-04
44GO:0004565: beta-galactosidase activity6.71E-04
45GO:0050734: hydroxycinnamoyltransferase activity8.60E-04
46GO:0016992: lipoate synthase activity8.60E-04
47GO:0016742: hydroxymethyl-, formyl- and related transferase activity8.60E-04
48GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity8.60E-04
49GO:0070402: NADPH binding8.60E-04
50GO:0008864: formyltetrahydrofolate deformylase activity8.60E-04
51GO:0051537: 2 iron, 2 sulfur cluster binding1.17E-03
52GO:0048027: mRNA 5'-UTR binding1.23E-03
53GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.23E-03
54GO:0016851: magnesium chelatase activity1.23E-03
55GO:0009882: blue light photoreceptor activity1.23E-03
56GO:0051287: NAD binding1.35E-03
57GO:0003727: single-stranded RNA binding1.61E-03
58GO:0016987: sigma factor activity1.64E-03
59GO:0043495: protein anchor1.64E-03
60GO:0001053: plastid sigma factor activity1.64E-03
61GO:0005525: GTP binding1.77E-03
62GO:0080046: quercetin 4'-O-glucosyltransferase activity2.57E-03
63GO:0004332: fructose-bisphosphate aldolase activity2.57E-03
64GO:0004130: cytochrome-c peroxidase activity2.57E-03
65GO:0035673: oligopeptide transmembrane transporter activity2.57E-03
66GO:0042578: phosphoric ester hydrolase activity2.57E-03
67GO:0016615: malate dehydrogenase activity2.57E-03
68GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.57E-03
69GO:0005506: iron ion binding2.60E-03
70GO:0004124: cysteine synthase activity3.09E-03
71GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.09E-03
72GO:0030060: L-malate dehydrogenase activity3.09E-03
73GO:0005261: cation channel activity3.09E-03
74GO:0003886: DNA (cytosine-5-)-methyltransferase activity3.09E-03
75GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen3.50E-03
76GO:0019899: enzyme binding3.64E-03
77GO:0016168: chlorophyll binding3.81E-03
78GO:0008135: translation factor activity, RNA binding4.84E-03
79GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water4.84E-03
80GO:0003729: mRNA binding5.86E-03
81GO:0003746: translation elongation factor activity5.96E-03
82GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity6.15E-03
83GO:0030234: enzyme regulator activity6.85E-03
84GO:0016887: ATPase activity8.33E-03
85GO:0015198: oligopeptide transporter activity8.33E-03
86GO:0003755: peptidyl-prolyl cis-trans isomerase activity8.97E-03
87GO:0010329: auxin efflux transmembrane transporter activity9.11E-03
88GO:0005315: inorganic phosphate transmembrane transporter activity9.11E-03
89GO:0000155: phosphorelay sensor kinase activity9.11E-03
90GO:0042973: glucan endo-1,3-beta-D-glucosidase activity9.92E-03
91GO:0008266: poly(U) RNA binding9.92E-03
92GO:0005515: protein binding1.06E-02
93GO:0003690: double-stranded DNA binding1.07E-02
94GO:0031409: pigment binding1.16E-02
95GO:0005528: FK506 binding1.25E-02
96GO:0022891: substrate-specific transmembrane transporter activity1.62E-02
97GO:0019825: oxygen binding1.74E-02
98GO:0003924: GTPase activity1.82E-02
99GO:0019843: rRNA binding1.86E-02
100GO:0020037: heme binding1.99E-02
101GO:0046933: proton-transporting ATP synthase activity, rotational mechanism2.03E-02
102GO:0030170: pyridoxal phosphate binding2.06E-02
103GO:0016853: isomerase activity2.14E-02
104GO:0010181: FMN binding2.14E-02
105GO:0004872: receptor activity2.25E-02
106GO:0046910: pectinesterase inhibitor activity2.39E-02
107GO:0008017: microtubule binding2.68E-02
108GO:0016791: phosphatase activity2.71E-02
109GO:0016722: oxidoreductase activity, oxidizing metal ions2.83E-02
110GO:0016597: amino acid binding2.95E-02
111GO:0016787: hydrolase activity3.33E-02
112GO:0005096: GTPase activator activity3.84E-02
113GO:0004222: metalloendopeptidase activity3.97E-02
114GO:0030145: manganese ion binding4.11E-02
115GO:0016614: oxidoreductase activity, acting on CH-OH group of donors4.11E-02
116GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.39E-02
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Gene type



Gene DE type