GO Enrichment Analysis of Co-expressed Genes with
AT4G39620
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0048263: determination of dorsal identity | 0.00E+00 |
| 2 | GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | 0.00E+00 |
| 3 | GO:0006390: transcription from mitochondrial promoter | 6.26E-05 |
| 4 | GO:0006264: mitochondrial DNA replication | 6.26E-05 |
| 5 | GO:0033259: plastid DNA replication | 6.26E-05 |
| 6 | GO:0000002: mitochondrial genome maintenance | 1.52E-04 |
| 7 | GO:2000071: regulation of defense response by callose deposition | 1.52E-04 |
| 8 | GO:0006281: DNA repair | 2.54E-04 |
| 9 | GO:0009432: SOS response | 2.57E-04 |
| 10 | GO:0015675: nickel cation transport | 2.57E-04 |
| 11 | GO:0000730: DNA recombinase assembly | 3.73E-04 |
| 12 | GO:0009152: purine ribonucleotide biosynthetic process | 3.73E-04 |
| 13 | GO:0009855: determination of bilateral symmetry | 3.73E-04 |
| 14 | GO:0002229: defense response to oomycetes | 4.27E-04 |
| 15 | GO:0016131: brassinosteroid metabolic process | 6.32E-04 |
| 16 | GO:0010014: meristem initiation | 9.20E-04 |
| 17 | GO:0080060: integument development | 9.20E-04 |
| 18 | GO:0010098: suspensor development | 1.07E-03 |
| 19 | GO:0042148: strand invasion | 1.07E-03 |
| 20 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 1.24E-03 |
| 21 | GO:0042255: ribosome assembly | 1.24E-03 |
| 22 | GO:0010212: response to ionizing radiation | 1.41E-03 |
| 23 | GO:0009664: plant-type cell wall organization | 1.57E-03 |
| 24 | GO:1900865: chloroplast RNA modification | 1.77E-03 |
| 25 | GO:0006298: mismatch repair | 1.96E-03 |
| 26 | GO:0006949: syncytium formation | 1.96E-03 |
| 27 | GO:0009682: induced systemic resistance | 2.17E-03 |
| 28 | GO:0006312: mitotic recombination | 2.37E-03 |
| 29 | GO:0010075: regulation of meristem growth | 2.58E-03 |
| 30 | GO:0009887: animal organ morphogenesis | 2.80E-03 |
| 31 | GO:0006302: double-strand break repair | 2.80E-03 |
| 32 | GO:0010073: meristem maintenance | 3.74E-03 |
| 33 | GO:0040008: regulation of growth | 3.88E-03 |
| 34 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 4.24E-03 |
| 35 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 4.50E-03 |
| 36 | GO:0010501: RNA secondary structure unwinding | 5.31E-03 |
| 37 | GO:0010087: phloem or xylem histogenesis | 5.31E-03 |
| 38 | GO:0010118: stomatal movement | 5.31E-03 |
| 39 | GO:0009741: response to brassinosteroid | 5.59E-03 |
| 40 | GO:0010268: brassinosteroid homeostasis | 5.59E-03 |
| 41 | GO:0009658: chloroplast organization | 6.27E-03 |
| 42 | GO:0032502: developmental process | 6.76E-03 |
| 43 | GO:0006464: cellular protein modification process | 7.38E-03 |
| 44 | GO:0009828: plant-type cell wall loosening | 7.38E-03 |
| 45 | GO:0006310: DNA recombination | 7.38E-03 |
| 46 | GO:0009867: jasmonic acid mediated signaling pathway | 1.19E-02 |
| 47 | GO:0030001: metal ion transport | 1.30E-02 |
| 48 | GO:0009926: auxin polar transport | 1.42E-02 |
| 49 | GO:0009965: leaf morphogenesis | 1.54E-02 |
| 50 | GO:0006260: DNA replication | 1.63E-02 |
| 51 | GO:0031347: regulation of defense response | 1.63E-02 |
| 52 | GO:0009846: pollen germination | 1.67E-02 |
| 53 | GO:0006364: rRNA processing | 1.75E-02 |
| 54 | GO:0010224: response to UV-B | 1.80E-02 |
| 55 | GO:0006096: glycolytic process | 1.98E-02 |
| 56 | GO:0009620: response to fungus | 2.11E-02 |
| 57 | GO:0007165: signal transduction | 2.25E-02 |
| 58 | GO:0009058: biosynthetic process | 2.75E-02 |
| 59 | GO:0009845: seed germination | 2.80E-02 |
| 60 | GO:0006633: fatty acid biosynthetic process | 3.11E-02 |
| 61 | GO:0009451: RNA modification | 3.38E-02 |
| 62 | GO:0008380: RNA splicing | 3.77E-02 |
| 63 | GO:0009826: unidimensional cell growth | 4.42E-02 |
| 64 | GO:0006970: response to osmotic stress | 4.78E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004479: methionyl-tRNA formyltransferase activity | 0.00E+00 |
| 2 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 3 | GO:0008395: steroid hydroxylase activity | 6.26E-05 |
| 4 | GO:0015099: nickel cation transmembrane transporter activity | 1.52E-04 |
| 5 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 2.57E-04 |
| 6 | GO:0008864: formyltetrahydrofolate deformylase activity | 2.57E-04 |
| 7 | GO:0008409: 5'-3' exonuclease activity | 4.99E-04 |
| 8 | GO:0003697: single-stranded DNA binding | 9.88E-04 |
| 9 | GO:0000150: recombinase activity | 1.07E-03 |
| 10 | GO:0004520: endodeoxyribonuclease activity | 1.24E-03 |
| 11 | GO:0000400: four-way junction DNA binding | 1.24E-03 |
| 12 | GO:0003690: double-stranded DNA binding | 1.73E-03 |
| 13 | GO:0030955: potassium ion binding | 1.77E-03 |
| 14 | GO:0004743: pyruvate kinase activity | 1.77E-03 |
| 15 | GO:0008026: ATP-dependent helicase activity | 2.51E-03 |
| 16 | GO:0009982: pseudouridine synthase activity | 2.58E-03 |
| 17 | GO:0008266: poly(U) RNA binding | 2.80E-03 |
| 18 | GO:0003887: DNA-directed DNA polymerase activity | 3.26E-03 |
| 19 | GO:0008094: DNA-dependent ATPase activity | 3.98E-03 |
| 20 | GO:0008408: 3'-5' exonuclease activity | 3.98E-03 |
| 21 | GO:0003727: single-stranded RNA binding | 4.76E-03 |
| 22 | GO:0004518: nuclease activity | 6.76E-03 |
| 23 | GO:0003684: damaged DNA binding | 7.38E-03 |
| 24 | GO:0003677: DNA binding | 8.18E-03 |
| 25 | GO:0004004: ATP-dependent RNA helicase activity | 9.36E-03 |
| 26 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 9.70E-03 |
| 27 | GO:0005096: GTPase activator activity | 1.04E-02 |
| 28 | GO:0003993: acid phosphatase activity | 1.23E-02 |
| 29 | GO:0004712: protein serine/threonine/tyrosine kinase activity | 1.26E-02 |
| 30 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.75E-02 |
| 31 | GO:0016874: ligase activity | 2.16E-02 |
| 32 | GO:0003779: actin binding | 2.21E-02 |
| 33 | GO:0019843: rRNA binding | 2.65E-02 |
| 34 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 2.70E-02 |
| 35 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 3.95E-02 |
| 36 | GO:0008168: methyltransferase activity | 4.42E-02 |
| 37 | GO:0000287: magnesium ion binding | 4.48E-02 |
| 38 | GO:0003824: catalytic activity | 4.53E-02 |
| 39 | GO:0004601: peroxidase activity | 4.54E-02 |