Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39460

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0031054: pre-miRNA processing0.00E+00
2GO:0051290: protein heterotetramerization0.00E+00
3GO:1901671: positive regulation of superoxide dismutase activity0.00E+00
4GO:0010028: xanthophyll cycle4.83E-06
5GO:0016122: xanthophyll metabolic process1.33E-05
6GO:0006568: tryptophan metabolic process1.33E-05
7GO:0010589: leaf proximal/distal pattern formation2.46E-05
8GO:0051604: protein maturation2.46E-05
9GO:0043572: plastid fission3.83E-05
10GO:0006986: response to unfolded protein3.83E-05
11GO:0051085: chaperone mediated protein folding requiring cofactor3.83E-05
12GO:0009902: chloroplast relocation5.40E-05
13GO:0035279: mRNA cleavage involved in gene silencing by miRNA5.40E-05
14GO:0015994: chlorophyll metabolic process5.40E-05
15GO:0045962: positive regulation of development, heterochronic9.04E-05
16GO:0035196: production of miRNAs involved in gene silencing by miRNA1.32E-04
17GO:0006098: pentose-phosphate shunt2.02E-04
18GO:0010267: production of ta-siRNAs involved in RNA interference2.27E-04
19GO:0010020: chloroplast fission3.61E-04
20GO:0007017: microtubule-based process4.78E-04
21GO:0010305: leaf vascular tissue pattern formation7.00E-04
22GO:1901657: glycosyl compound metabolic process8.71E-04
23GO:0010027: thylakoid membrane organization1.01E-03
24GO:0009788: negative regulation of abscisic acid-activated signaling pathway1.05E-03
25GO:0009637: response to blue light1.40E-03
26GO:0006631: fatty acid metabolic process1.57E-03
27GO:0009965: leaf morphogenesis1.79E-03
28GO:0006633: fatty acid biosynthetic process3.47E-03
29GO:0009658: chloroplast organization4.99E-03
30GO:0007049: cell cycle5.38E-03
31GO:0009408: response to heat7.58E-03
32GO:0009735: response to cytokinin1.06E-02
33GO:0030154: cell differentiation1.99E-02
34GO:0009733: response to auxin2.03E-02
35GO:0009409: response to cold2.32E-02
36GO:0005975: carbohydrate metabolic process2.52E-02
37GO:0046686: response to cadmium ion2.57E-02
38GO:0009737: response to abscisic acid3.21E-02
39GO:0006508: proteolysis4.17E-02
RankGO TermAdjusted P value
1GO:0046422: violaxanthin de-epoxidase activity0.00E+00
2GO:0004425: indole-3-glycerol-phosphate synthase activity4.83E-06
3GO:0035198: miRNA binding3.83E-05
4GO:0003725: double-stranded RNA binding3.33E-04
5GO:0051087: chaperone binding4.78E-04
6GO:0005515: protein binding8.71E-04
7GO:0102483: scopolin beta-glucosidase activity1.13E-03
8GO:0008236: serine-type peptidase activity1.16E-03
9GO:0008422: beta-glucosidase activity1.49E-03
10GO:0043621: protein self-association1.75E-03
11GO:0005198: structural molecule activity1.79E-03
12GO:0051082: unfolded protein binding2.56E-03
13GO:0042802: identical protein binding4.36E-03
14GO:0008233: peptidase activity5.72E-03
15GO:0003924: GTPase activity7.58E-03
16GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.38E-02
17GO:0005507: copper ion binding1.46E-02
18GO:0005516: calmodulin binding1.51E-02
19GO:0005525: GTP binding1.61E-02
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Gene type



Gene DE type