co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G39390

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0043620: regulation of DNA-templated transcription in response to stress	0.00E+00
2	GO:0010401: pectic galactan metabolic process	0.00E+00
3	GO:0036503: ERAD pathway	0.00E+00
4	GO:0072722: response to amitrole	0.00E+00
5	GO:0010055: atrichoblast differentiation	0.00E+00
6	GO:0043132: NAD transport	3.02E-06
7	GO:0055074: calcium ion homeostasis	1.09E-05
8	GO:0009814: defense response, incompatible interaction	1.20E-04
9	GO:0009623: response to parasitic fungus	2.55E-04
10	GO:0035352: NAD transmembrane transport	2.55E-04
11	GO:0099132: ATP hydrolysis coupled cation transmembrane transport	2.55E-04
12	GO:0042539: hypotonic salinity response	2.55E-04
13	GO:0032107: regulation of response to nutrient levels	2.55E-04
14	GO:0016337: single organismal cell-cell adhesion	2.55E-04
15	GO:0009868: jasmonic acid and ethylene-dependent systemic resistance, jasmonic acid mediated signaling pathway	2.55E-04
16	GO:0090332: stomatal closure	4.21E-04
17	GO:0009627: systemic acquired resistance	5.36E-04
18	GO:0048569: post-embryonic animal organ development	5.64E-04
19	GO:0052541: plant-type cell wall cellulose metabolic process	5.64E-04
20	GO:0042853: L-alanine catabolic process	5.64E-04
21	GO:0019725: cellular homeostasis	5.64E-04
22	GO:0051252: regulation of RNA metabolic process	5.64E-04
23	GO:0015012: heparan sulfate proteoglycan biosynthetic process	5.64E-04
24	GO:0046939: nucleotide phosphorylation	5.64E-04
25	GO:0080151: positive regulation of salicylic acid mediated signaling pathway	5.64E-04
26	GO:0006024: glycosaminoglycan biosynthetic process	5.64E-04
27	GO:0006788: heme oxidation	9.15E-04
28	GO:0071367: cellular response to brassinosteroid stimulus	9.15E-04
29	GO:0008333: endosome to lysosome transport	9.15E-04
30	GO:0044375: regulation of peroxisome size	9.15E-04
31	GO:0045836: positive regulation of meiotic nuclear division	9.15E-04
32	GO:0010186: positive regulation of cellular defense response	9.15E-04
33	GO:0010272: response to silver ion	9.15E-04
34	GO:0010104: regulation of ethylene-activated signaling pathway	1.31E-03
35	GO:0015858: nucleoside transport	1.31E-03
36	GO:0010731: protein glutathionylation	1.31E-03
37	GO:0032877: positive regulation of DNA endoreduplication	1.31E-03
38	GO:0000187: activation of MAPK activity	1.31E-03
39	GO:0070301: cellular response to hydrogen peroxide	1.31E-03
40	GO:0016998: cell wall macromolecule catabolic process	1.37E-03
41	GO:0071369: cellular response to ethylene stimulus	1.63E-03
42	GO:0007112: male meiosis cytokinesis	1.75E-03
43	GO:1990937: xylan acetylation	1.75E-03
44	GO:0060548: negative regulation of cell death	1.75E-03
45	GO:0033320: UDP-D-xylose biosynthetic process	1.75E-03
46	GO:0048638: regulation of developmental growth	1.75E-03
47	GO:0042147: retrograde transport, endosome to Golgi	1.92E-03
48	GO:0045927: positive regulation of growth	2.23E-03
49	GO:0006656: phosphatidylcholine biosynthetic process	2.23E-03
50	GO:0098719: sodium ion import across plasma membrane	2.23E-03
51	GO:0046283: anthocyanin-containing compound metabolic process	2.23E-03
52	GO:0097428: protein maturation by iron-sulfur cluster transfer	2.23E-03
53	GO:0031365: N-terminal protein amino acid modification	2.23E-03
54	GO:0009435: NAD biosynthetic process	2.23E-03
55	GO:0006665: sphingolipid metabolic process	2.23E-03
56	GO:0016310: phosphorylation	2.33E-03
57	GO:0046686: response to cadmium ion	2.51E-03
58	GO:0010183: pollen tube guidance	2.57E-03
59	GO:0042732: D-xylose metabolic process	2.75E-03
60	GO:0045736: negative regulation of cyclin-dependent protein serine/threonine kinase activity	2.75E-03
61	GO:0042176: regulation of protein catabolic process	2.75E-03
62	GO:0060918: auxin transport	2.75E-03
63	GO:0045040: protein import into mitochondrial outer membrane	2.75E-03
64	GO:0006139: nucleobase-containing compound metabolic process	2.75E-03
65	GO:0009117: nucleotide metabolic process	2.75E-03
66	GO:0006891: intra-Golgi vesicle-mediated transport	2.75E-03
67	GO:0010264: myo-inositol hexakisphosphate biosynthetic process	2.75E-03
68	GO:0000911: cytokinesis by cell plate formation	3.30E-03
69	GO:0009861: jasmonic acid and ethylene-dependent systemic resistance	3.30E-03
70	GO:0006914: autophagy	3.33E-03
71	GO:0009567: double fertilization forming a zygote and endosperm	3.33E-03
72	GO:0071446: cellular response to salicylic acid stimulus	3.89E-03
73	GO:0015937: coenzyme A biosynthetic process	3.89E-03
74	GO:0000122: negative regulation of transcription from RNA polymerase II promoter	3.89E-03
75	GO:0009610: response to symbiotic fungus	3.89E-03
76	GO:0007050: cell cycle arrest	3.89E-03
77	GO:0009058: biosynthetic process	3.90E-03
78	GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline	4.52E-03
79	GO:2000070: regulation of response to water deprivation	4.52E-03
80	GO:0006102: isocitrate metabolic process	4.52E-03
81	GO:0022900: electron transport chain	5.18E-03
82	GO:0001558: regulation of cell growth	5.18E-03
83	GO:0010204: defense response signaling pathway, resistance gene-independent	5.18E-03
84	GO:0006972: hyperosmotic response	5.18E-03
85	GO:0015031: protein transport	5.22E-03
86	GO:0009407: toxin catabolic process	5.71E-03
87	GO:0007338: single fertilization	5.86E-03
88	GO:0048268: clathrin coat assembly	6.58E-03
89	GO:0010267: production of ta-siRNAs involved in RNA interference	6.58E-03
90	GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway	6.58E-03
91	GO:0008202: steroid metabolic process	6.58E-03
92	GO:0051453: regulation of intracellular pH	6.58E-03
93	GO:0006099: tricarboxylic acid cycle	6.86E-03
94	GO:0006032: chitin catabolic process	7.33E-03
95	GO:0006839: mitochondrial transport	7.48E-03
96	GO:0000272: polysaccharide catabolic process	8.11E-03
97	GO:0048229: gametophyte development	8.11E-03
98	GO:0051707: response to other organism	8.47E-03
99	GO:0016925: protein sumoylation	8.92E-03
100	GO:0006890: retrograde vesicle-mediated transport, Golgi to ER	8.92E-03
101	GO:0009636: response to toxic substance	9.53E-03
102	GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process	9.75E-03
103	GO:0006626: protein targeting to mitochondrion	9.75E-03
104	GO:0055046: microgametogenesis	9.75E-03
105	GO:0006541: glutamine metabolic process	1.06E-02
106	GO:0042742: defense response to bacterium	1.08E-02
107	GO:0006508: proteolysis	1.09E-02
108	GO:0070588: calcium ion transmembrane transport	1.15E-02
109	GO:0009225: nucleotide-sugar metabolic process	1.15E-02
110	GO:0009555: pollen development	1.19E-02
111	GO:0034976: response to endoplasmic reticulum stress	1.24E-02
112	GO:0007165: signal transduction	1.36E-02
113	GO:0043622: cortical microtubule organization	1.43E-02
114	GO:0051302: regulation of cell division	1.43E-02
115	GO:0051321: meiotic cell cycle	1.53E-02
116	GO:0080092: regulation of pollen tube growth	1.64E-02
117	GO:0006886: intracellular protein transport	1.65E-02
118	GO:0071215: cellular response to abscisic acid stimulus	1.74E-02
119	GO:0010227: floral organ abscission	1.74E-02
120	GO:0034220: ion transmembrane transport	2.07E-02
121	GO:0010051: xylem and phloem pattern formation	2.07E-02
122	GO:0010087: phloem or xylem histogenesis	2.07E-02
123	GO:0006810: transport	2.08E-02
124	GO:0048868: pollen tube development	2.18E-02
125	GO:0048544: recognition of pollen	2.29E-02
126	GO:0006814: sodium ion transport	2.29E-02
127	GO:0040008: regulation of growth	2.70E-02
128	GO:0030163: protein catabolic process	2.78E-02
129	GO:0071805: potassium ion transmembrane transport	3.03E-02
130	GO:0000910: cytokinesis	3.16E-02
131	GO:0001666: response to hypoxia	3.29E-02
132	GO:0009615: response to virus	3.29E-02
133	GO:0008219: cell death	3.97E-02
134	GO:0009834: plant-type secondary cell wall biogenesis	4.26E-02
135	GO:0048527: lateral root development	4.41E-02
136	GO:0009631: cold acclimation	4.41E-02
137	GO:0010043: response to zinc ion	4.41E-02

Rank	GO Term	Adjusted P value
1	GO:0008734: L-aspartate oxidase activity	0.00E+00
2	GO:0051670: inulinase activity	0.00E+00
3	GO:0051765: inositol tetrakisphosphate kinase activity	0.00E+00
4	GO:0052873: FMN reductase (NADPH) activity	0.00E+00
5	GO:0044610: FMN transmembrane transporter activity	0.00E+00
6	GO:0008752: FMN reductase activity	0.00E+00
7	GO:0018580: nitronate monooxygenase activity	0.00E+00
8	GO:0019205: nucleobase-containing compound kinase activity	0.00E+00
9	GO:0051766: inositol trisphosphate kinase activity	0.00E+00
10	GO:0044318: L-aspartate:fumarate oxidoreductase activity	0.00E+00
11	GO:0051724: NAD transporter activity	3.02E-06
12	GO:0000824: inositol tetrakisphosphate 3-kinase activity	2.55E-04
13	GO:0004105: choline-phosphate cytidylyltransferase activity	2.55E-04
14	GO:0051669: fructan beta-fructosidase activity	2.55E-04
15	GO:0047326: inositol tetrakisphosphate 5-kinase activity	2.55E-04
16	GO:0000823: inositol-1,4,5-trisphosphate 6-kinase activity	2.55E-04
17	GO:0048037: cofactor binding	2.55E-04
18	GO:0004633: phosphopantothenoylcysteine decarboxylase activity	2.55E-04
19	GO:0019786: Atg8-specific protease activity	2.55E-04
20	GO:0015230: FAD transmembrane transporter activity	2.55E-04
21	GO:0031219: levanase activity	2.55E-04
22	GO:2001147: camalexin binding	2.55E-04
23	GO:0008440: inositol-1,4,5-trisphosphate 3-kinase activity	2.55E-04
24	GO:2001227: quercitrin binding	2.55E-04
25	GO:0022857: transmembrane transporter activity	4.04E-04
26	GO:0004568: chitinase activity	4.92E-04
27	GO:0032934: sterol binding	5.64E-04
28	GO:0008805: carbon-monoxide oxygenase activity	5.64E-04
29	GO:0004775: succinate-CoA ligase (ADP-forming) activity	5.64E-04
30	GO:0008428: ribonuclease inhibitor activity	5.64E-04
31	GO:0019779: Atg8 activating enzyme activity	5.64E-04
32	GO:0004338: glucan exo-1,3-beta-glucosidase activity	5.64E-04
33	GO:0004385: guanylate kinase activity	5.64E-04
34	GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity	5.64E-04
35	GO:0004776: succinate-CoA ligase (GDP-forming) activity	5.64E-04
36	GO:0004566: beta-glucuronidase activity	5.64E-04
37	GO:0015228: coenzyme A transmembrane transporter activity	5.64E-04
38	GO:0042409: caffeoyl-CoA O-methyltransferase activity	9.15E-04
39	GO:0003955: NAD(P)H dehydrogenase (quinone) activity	9.15E-04
40	GO:0004190: aspartic-type endopeptidase activity	9.26E-04
41	GO:0004867: serine-type endopeptidase inhibitor activity	9.26E-04
42	GO:0019201: nucleotide kinase activity	1.31E-03
43	GO:0035529: NADH pyrophosphatase activity	1.31E-03
44	GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity	1.31E-03
45	GO:0004449: isocitrate dehydrogenase (NAD+) activity	1.31E-03
46	GO:0052725: inositol-1,3,4-trisphosphate 6-kinase activity	1.31E-03
47	GO:0035251: UDP-glucosyltransferase activity	1.37E-03
48	GO:0019776: Atg8 ligase activity	1.75E-03
49	GO:0004392: heme oxygenase (decyclizing) activity	1.75E-03
50	GO:0004301: epoxide hydrolase activity	1.75E-03
51	GO:0008948: oxaloacetate decarboxylase activity	2.23E-03
52	GO:0080122: AMP transmembrane transporter activity	2.23E-03
53	GO:0031386: protein tag	2.23E-03
54	GO:0047631: ADP-ribose diphosphatase activity	2.23E-03
55	GO:0010181: FMN binding	2.40E-03
56	GO:1990538: xylan O-acetyltransferase activity	2.75E-03
57	GO:0004861: cyclin-dependent protein serine/threonine kinase inhibitor activity	2.75E-03
58	GO:0031593: polyubiquitin binding	2.75E-03
59	GO:0000210: NAD+ diphosphatase activity	2.75E-03
60	GO:0048040: UDP-glucuronate decarboxylase activity	2.75E-03
61	GO:0004017: adenylate kinase activity	3.30E-03
62	GO:0005347: ATP transmembrane transporter activity	3.30E-03
63	GO:0004656: procollagen-proline 4-dioxygenase activity	3.30E-03
64	GO:0051020: GTPase binding	3.30E-03
65	GO:0015217: ADP transmembrane transporter activity	3.30E-03
66	GO:0070403: NAD+ binding	3.30E-03
67	GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity	3.54E-03
68	GO:0008235: metalloexopeptidase activity	3.89E-03
69	GO:0102425: myricetin 3-O-glucosyltransferase activity	3.89E-03
70	GO:0102360: daphnetin 3-O-glucosyltransferase activity	3.89E-03
71	GO:0008121: ubiquinol-cytochrome-c reductase activity	3.89E-03
72	GO:0008320: protein transmembrane transporter activity	3.89E-03
73	GO:0043295: glutathione binding	3.89E-03
74	GO:0047893: flavonol 3-O-glucosyltransferase activity	4.52E-03
75	GO:0005544: calcium-dependent phospholipid binding	4.52E-03
76	GO:0004525: ribonuclease III activity	4.52E-03
77	GO:0004708: MAP kinase kinase activity	4.52E-03
78	GO:0030247: polysaccharide binding	4.68E-03
79	GO:0008142: oxysterol binding	5.18E-03
80	GO:0031490: chromatin DNA binding	6.58E-03
81	GO:0030234: enzyme regulator activity	7.33E-03
82	GO:0008171: O-methyltransferase activity	7.33E-03
83	GO:0005545: 1-phosphatidylinositol binding	7.33E-03
84	GO:0015386: potassium:proton antiporter activity	8.11E-03
85	GO:0004177: aminopeptidase activity	8.11E-03
86	GO:0008559: xenobiotic-transporting ATPase activity	8.11E-03
87	GO:0004364: glutathione transferase activity	8.13E-03
88	GO:0005388: calcium-transporting ATPase activity	9.75E-03
89	GO:0004565: beta-galactosidase activity	9.75E-03
90	GO:0031624: ubiquitin conjugating enzyme binding	1.06E-02
91	GO:0004175: endopeptidase activity	1.06E-02
92	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.06E-02
93	GO:0016301: kinase activity	1.09E-02
94	GO:0008061: chitin binding	1.15E-02
95	GO:0043130: ubiquitin binding	1.34E-02
96	GO:0001046: core promoter sequence-specific DNA binding	1.34E-02
97	GO:0031418: L-ascorbic acid binding	1.34E-02
98	GO:0004707: MAP kinase activity	1.53E-02
99	GO:0004298: threonine-type endopeptidase activity	1.53E-02
100	GO:0008408: 3'-5' exonuclease activity	1.53E-02
101	GO:0046872: metal ion binding	1.55E-02
102	GO:0051082: unfolded protein binding	1.63E-02
103	GO:0008810: cellulase activity	1.74E-02
104	GO:0003756: protein disulfide isomerase activity	1.85E-02
105	GO:0030246: carbohydrate binding	1.85E-02
106	GO:0005102: receptor binding	1.95E-02
107	GO:0047134: protein-disulfide reductase activity	1.95E-02
108	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	2.10E-02
109	GO:0001085: RNA polymerase II transcription factor binding	2.18E-02
110	GO:0004527: exonuclease activity	2.18E-02
111	GO:0030276: clathrin binding	2.18E-02
112	GO:0004791: thioredoxin-disulfide reductase activity	2.29E-02
113	GO:0016853: isomerase activity	2.29E-02
114	GO:0008565: protein transporter activity	2.45E-02
115	GO:0005524: ATP binding	2.63E-02
116	GO:0015297: antiporter activity	2.70E-02
117	GO:0015385: sodium:proton antiporter activity	2.78E-02
118	GO:0015250: water channel activity	3.29E-02
119	GO:0051213: dioxygenase activity	3.29E-02
120	GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity	3.97E-02
121	GO:0005096: GTPase activator activity	4.12E-02
122	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	4.41E-02
123	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	4.70E-02