GO Enrichment Analysis of Co-expressed Genes with
AT4G39350
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:1902171: regulation of tocopherol cyclase activity | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0033231: carbohydrate export | 0.00E+00 |
| 5 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 6 | GO:0006573: valine metabolic process | 0.00E+00 |
| 7 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 8 | GO:0009661: chromoplast organization | 0.00E+00 |
| 9 | GO:0009704: de-etiolation | 1.43E-04 |
| 10 | GO:0050821: protein stabilization | 1.43E-04 |
| 11 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.82E-04 |
| 12 | GO:0043007: maintenance of rDNA | 1.82E-04 |
| 13 | GO:0090548: response to nitrate starvation | 1.82E-04 |
| 14 | GO:0019510: S-adenosylhomocysteine catabolic process | 1.82E-04 |
| 15 | GO:1902334: fructose export from vacuole to cytoplasm | 1.82E-04 |
| 16 | GO:0015969: guanosine tetraphosphate metabolic process | 1.82E-04 |
| 17 | GO:0015755: fructose transport | 1.82E-04 |
| 18 | GO:0051180: vitamin transport | 1.82E-04 |
| 19 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 1.82E-04 |
| 20 | GO:0030974: thiamine pyrophosphate transport | 1.82E-04 |
| 21 | GO:0046467: membrane lipid biosynthetic process | 1.82E-04 |
| 22 | GO:1902025: nitrate import | 1.82E-04 |
| 23 | GO:0046900: tetrahydrofolylpolyglutamate metabolic process | 1.82E-04 |
| 24 | GO:0071277: cellular response to calcium ion | 1.82E-04 |
| 25 | GO:0080051: cutin transport | 1.82E-04 |
| 26 | GO:0006551: leucine metabolic process | 1.82E-04 |
| 27 | GO:0042371: vitamin K biosynthetic process | 1.82E-04 |
| 28 | GO:0015908: fatty acid transport | 4.10E-04 |
| 29 | GO:0006898: receptor-mediated endocytosis | 4.10E-04 |
| 30 | GO:0033353: S-adenosylmethionine cycle | 4.10E-04 |
| 31 | GO:0015893: drug transport | 4.10E-04 |
| 32 | GO:0006650: glycerophospholipid metabolic process | 4.10E-04 |
| 33 | GO:0010541: acropetal auxin transport | 4.10E-04 |
| 34 | GO:1904143: positive regulation of carotenoid biosynthetic process | 4.10E-04 |
| 35 | GO:0010207: photosystem II assembly | 5.21E-04 |
| 36 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.48E-04 |
| 37 | GO:0006081: cellular aldehyde metabolic process | 6.69E-04 |
| 38 | GO:0046168: glycerol-3-phosphate catabolic process | 6.69E-04 |
| 39 | GO:0015714: phosphoenolpyruvate transport | 6.69E-04 |
| 40 | GO:0010160: formation of animal organ boundary | 6.69E-04 |
| 41 | GO:0009658: chloroplast organization | 9.50E-04 |
| 42 | GO:0071484: cellular response to light intensity | 9.55E-04 |
| 43 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 9.55E-04 |
| 44 | GO:0006072: glycerol-3-phosphate metabolic process | 9.55E-04 |
| 45 | GO:0042823: pyridoxal phosphate biosynthetic process | 9.55E-04 |
| 46 | GO:0010222: stem vascular tissue pattern formation | 1.27E-03 |
| 47 | GO:0015976: carbon utilization | 1.27E-03 |
| 48 | GO:0015689: molybdate ion transport | 1.27E-03 |
| 49 | GO:0010600: regulation of auxin biosynthetic process | 1.27E-03 |
| 50 | GO:0015713: phosphoglycerate transport | 1.27E-03 |
| 51 | GO:0071483: cellular response to blue light | 1.27E-03 |
| 52 | GO:0009902: chloroplast relocation | 1.27E-03 |
| 53 | GO:0010021: amylopectin biosynthetic process | 1.27E-03 |
| 54 | GO:0019252: starch biosynthetic process | 1.60E-03 |
| 55 | GO:0009107: lipoate biosynthetic process | 1.61E-03 |
| 56 | GO:0016123: xanthophyll biosynthetic process | 1.61E-03 |
| 57 | GO:0016120: carotene biosynthetic process | 1.61E-03 |
| 58 | GO:0009904: chloroplast accumulation movement | 1.61E-03 |
| 59 | GO:0060918: auxin transport | 1.98E-03 |
| 60 | GO:0006086: acetyl-CoA biosynthetic process from pyruvate | 1.98E-03 |
| 61 | GO:0009643: photosynthetic acclimation | 1.98E-03 |
| 62 | GO:0032259: methylation | 2.22E-03 |
| 63 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.38E-03 |
| 64 | GO:0009082: branched-chain amino acid biosynthetic process | 2.38E-03 |
| 65 | GO:0017148: negative regulation of translation | 2.38E-03 |
| 66 | GO:0009099: valine biosynthetic process | 2.38E-03 |
| 67 | GO:0009903: chloroplast avoidance movement | 2.38E-03 |
| 68 | GO:0009554: megasporogenesis | 2.38E-03 |
| 69 | GO:0010019: chloroplast-nucleus signaling pathway | 2.38E-03 |
| 70 | GO:0010161: red light signaling pathway | 2.80E-03 |
| 71 | GO:1900056: negative regulation of leaf senescence | 2.80E-03 |
| 72 | GO:1900057: positive regulation of leaf senescence | 2.80E-03 |
| 73 | GO:0015995: chlorophyll biosynthetic process | 2.89E-03 |
| 74 | GO:0010411: xyloglucan metabolic process | 2.89E-03 |
| 75 | GO:0055114: oxidation-reduction process | 3.23E-03 |
| 76 | GO:0000105: histidine biosynthetic process | 3.24E-03 |
| 77 | GO:0009231: riboflavin biosynthetic process | 3.24E-03 |
| 78 | GO:0019827: stem cell population maintenance | 3.24E-03 |
| 79 | GO:0010928: regulation of auxin mediated signaling pathway | 3.24E-03 |
| 80 | GO:0010218: response to far red light | 3.53E-03 |
| 81 | GO:0009932: cell tip growth | 3.71E-03 |
| 82 | GO:0009657: plastid organization | 3.71E-03 |
| 83 | GO:0009097: isoleucine biosynthetic process | 3.71E-03 |
| 84 | GO:0009637: response to blue light | 4.05E-03 |
| 85 | GO:0006098: pentose-phosphate shunt | 4.20E-03 |
| 86 | GO:0009821: alkaloid biosynthetic process | 4.20E-03 |
| 87 | GO:0010206: photosystem II repair | 4.20E-03 |
| 88 | GO:0034765: regulation of ion transmembrane transport | 4.20E-03 |
| 89 | GO:0090333: regulation of stomatal closure | 4.20E-03 |
| 90 | GO:0006754: ATP biosynthetic process | 4.20E-03 |
| 91 | GO:0010205: photoinhibition | 4.71E-03 |
| 92 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.71E-03 |
| 93 | GO:0010114: response to red light | 5.21E-03 |
| 94 | GO:0006995: cellular response to nitrogen starvation | 5.24E-03 |
| 95 | GO:0009688: abscisic acid biosynthetic process | 5.24E-03 |
| 96 | GO:0042546: cell wall biogenesis | 5.42E-03 |
| 97 | GO:0009737: response to abscisic acid | 5.48E-03 |
| 98 | GO:0046856: phosphatidylinositol dephosphorylation | 5.79E-03 |
| 99 | GO:0043085: positive regulation of catalytic activity | 5.79E-03 |
| 100 | GO:0009750: response to fructose | 5.79E-03 |
| 101 | GO:0016485: protein processing | 5.79E-03 |
| 102 | GO:0008361: regulation of cell size | 6.35E-03 |
| 103 | GO:0018107: peptidyl-threonine phosphorylation | 6.94E-03 |
| 104 | GO:0009725: response to hormone | 6.94E-03 |
| 105 | GO:0006094: gluconeogenesis | 6.94E-03 |
| 106 | GO:0010588: cotyledon vascular tissue pattern formation | 6.94E-03 |
| 107 | GO:0009585: red, far-red light phototransduction | 7.02E-03 |
| 108 | GO:0006857: oligopeptide transport | 7.51E-03 |
| 109 | GO:0010540: basipetal auxin transport | 7.55E-03 |
| 110 | GO:0034605: cellular response to heat | 7.55E-03 |
| 111 | GO:0006541: glutamine metabolic process | 7.55E-03 |
| 112 | GO:0007015: actin filament organization | 7.55E-03 |
| 113 | GO:0006096: glycolytic process | 8.30E-03 |
| 114 | GO:0043086: negative regulation of catalytic activity | 8.30E-03 |
| 115 | GO:0019762: glucosinolate catabolic process | 8.82E-03 |
| 116 | GO:0010025: wax biosynthetic process | 8.82E-03 |
| 117 | GO:0051017: actin filament bundle assembly | 9.48E-03 |
| 118 | GO:0009768: photosynthesis, light harvesting in photosystem I | 1.02E-02 |
| 119 | GO:0006396: RNA processing | 1.03E-02 |
| 120 | GO:0006468: protein phosphorylation | 1.08E-02 |
| 121 | GO:0051260: protein homooligomerization | 1.09E-02 |
| 122 | GO:0006306: DNA methylation | 1.09E-02 |
| 123 | GO:0031408: oxylipin biosynthetic process | 1.09E-02 |
| 124 | GO:0009408: response to heat | 1.11E-02 |
| 125 | GO:0030245: cellulose catabolic process | 1.16E-02 |
| 126 | GO:0010017: red or far-red light signaling pathway | 1.16E-02 |
| 127 | GO:0006730: one-carbon metabolic process | 1.16E-02 |
| 128 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.16E-02 |
| 129 | GO:0048443: stamen development | 1.31E-02 |
| 130 | GO:0006817: phosphate ion transport | 1.31E-02 |
| 131 | GO:0019722: calcium-mediated signaling | 1.31E-02 |
| 132 | GO:0009306: protein secretion | 1.31E-02 |
| 133 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.38E-02 |
| 134 | GO:0070417: cellular response to cold | 1.38E-02 |
| 135 | GO:0042391: regulation of membrane potential | 1.46E-02 |
| 136 | GO:0009958: positive gravitropism | 1.54E-02 |
| 137 | GO:0010197: polar nucleus fusion | 1.54E-02 |
| 138 | GO:0010182: sugar mediated signaling pathway | 1.54E-02 |
| 139 | GO:0048868: pollen tube development | 1.54E-02 |
| 140 | GO:0007059: chromosome segregation | 1.62E-02 |
| 141 | GO:0009646: response to absence of light | 1.62E-02 |
| 142 | GO:0008654: phospholipid biosynthetic process | 1.70E-02 |
| 143 | GO:0007623: circadian rhythm | 1.74E-02 |
| 144 | GO:0007264: small GTPase mediated signal transduction | 1.87E-02 |
| 145 | GO:0010583: response to cyclopentenone | 1.87E-02 |
| 146 | GO:0007166: cell surface receptor signaling pathway | 1.99E-02 |
| 147 | GO:0009639: response to red or far red light | 2.05E-02 |
| 148 | GO:0071805: potassium ion transmembrane transport | 2.14E-02 |
| 149 | GO:0007267: cell-cell signaling | 2.14E-02 |
| 150 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.42E-02 |
| 151 | GO:0018298: protein-chromophore linkage | 2.81E-02 |
| 152 | GO:0006970: response to osmotic stress | 2.89E-02 |
| 153 | GO:0000160: phosphorelay signal transduction system | 2.91E-02 |
| 154 | GO:0006499: N-terminal protein myristoylation | 3.01E-02 |
| 155 | GO:0009910: negative regulation of flower development | 3.11E-02 |
| 156 | GO:0048527: lateral root development | 3.11E-02 |
| 157 | GO:0034599: cellular response to oxidative stress | 3.43E-02 |
| 158 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.44E-02 |
| 159 | GO:0044550: secondary metabolite biosynthetic process | 3.62E-02 |
| 160 | GO:0006839: mitochondrial transport | 3.65E-02 |
| 161 | GO:0009926: auxin polar transport | 3.98E-02 |
| 162 | GO:0009744: response to sucrose | 3.98E-02 |
| 163 | GO:0045454: cell redox homeostasis | 3.98E-02 |
| 164 | GO:0009640: photomorphogenesis | 3.98E-02 |
| 165 | GO:0000209: protein polyubiquitination | 4.09E-02 |
| 166 | GO:0016042: lipid catabolic process | 4.76E-02 |
| 167 | GO:0006813: potassium ion transport | 4.92E-02 |
| 168 | GO:0009736: cytokinin-activated signaling pathway | 4.92E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0015284: fructose uniporter activity | 0.00E+00 |
| 2 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 3 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 4 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 5 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 0.00E+00 |
| 6 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 7 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 9 | GO:0008807: carboxyvinyl-carboxyphosphonate phosphorylmutase activity | 0.00E+00 |
| 10 | GO:0008935: 1,4-dihydroxy-2-naphthoyl-CoA synthase activity | 0.00E+00 |
| 11 | GO:0018708: thiol S-methyltransferase activity | 1.59E-06 |
| 12 | GO:0004373: glycogen (starch) synthase activity | 5.87E-06 |
| 13 | GO:0009011: starch synthase activity | 2.51E-05 |
| 14 | GO:0035671: enone reductase activity | 1.82E-04 |
| 15 | GO:0046906: tetrapyrrole binding | 1.82E-04 |
| 16 | GO:0090422: thiamine pyrophosphate transporter activity | 1.82E-04 |
| 17 | GO:0004013: adenosylhomocysteinase activity | 1.82E-04 |
| 18 | GO:0015121: phosphoenolpyruvate:phosphate antiporter activity | 1.82E-04 |
| 19 | GO:0010313: phytochrome binding | 1.82E-04 |
| 20 | GO:0003984: acetolactate synthase activity | 1.82E-04 |
| 21 | GO:0008242: omega peptidase activity | 1.82E-04 |
| 22 | GO:0015245: fatty acid transporter activity | 1.82E-04 |
| 23 | GO:0003879: ATP phosphoribosyltransferase activity | 1.82E-04 |
| 24 | GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity | 4.10E-04 |
| 25 | GO:0033201: alpha-1,4-glucan synthase activity | 4.10E-04 |
| 26 | GO:0004802: transketolase activity | 4.10E-04 |
| 27 | GO:0005353: fructose transmembrane transporter activity | 4.10E-04 |
| 28 | GO:0034722: gamma-glutamyl-peptidase activity | 4.10E-04 |
| 29 | GO:0008728: GTP diphosphokinase activity | 4.10E-04 |
| 30 | GO:0004565: beta-galactosidase activity | 4.63E-04 |
| 31 | GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity | 6.69E-04 |
| 32 | GO:0008430: selenium binding | 6.69E-04 |
| 33 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 6.69E-04 |
| 34 | GO:0016992: lipoate synthase activity | 6.69E-04 |
| 35 | GO:0003935: GTP cyclohydrolase II activity | 6.69E-04 |
| 36 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 6.69E-04 |
| 37 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 7.07E-04 |
| 38 | GO:0004672: protein kinase activity | 7.53E-04 |
| 39 | GO:0008168: methyltransferase activity | 8.97E-04 |
| 40 | GO:0048027: mRNA 5'-UTR binding | 9.55E-04 |
| 41 | GO:0004445: inositol-polyphosphate 5-phosphatase activity | 9.55E-04 |
| 42 | GO:0022890: inorganic cation transmembrane transporter activity | 9.55E-04 |
| 43 | GO:0004739: pyruvate dehydrogenase (acetyl-transferring) activity | 1.27E-03 |
| 44 | GO:0080032: methyl jasmonate esterase activity | 1.27E-03 |
| 45 | GO:0015098: molybdate ion transmembrane transporter activity | 1.27E-03 |
| 46 | GO:0042277: peptide binding | 1.27E-03 |
| 47 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.27E-03 |
| 48 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.61E-03 |
| 49 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.71E-03 |
| 50 | GO:0080030: methyl indole-3-acetate esterase activity | 1.98E-03 |
| 51 | GO:0004332: fructose-bisphosphate aldolase activity | 1.98E-03 |
| 52 | GO:0035673: oligopeptide transmembrane transporter activity | 1.98E-03 |
| 53 | GO:0004029: aldehyde dehydrogenase (NAD) activity | 1.98E-03 |
| 54 | GO:0034485: phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity | 1.98E-03 |
| 55 | GO:0005242: inward rectifier potassium channel activity | 2.38E-03 |
| 56 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 2.38E-03 |
| 57 | GO:0019899: enzyme binding | 2.80E-03 |
| 58 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 2.89E-03 |
| 59 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.71E-03 |
| 60 | GO:0042802: identical protein binding | 4.01E-03 |
| 61 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.20E-03 |
| 62 | GO:0071949: FAD binding | 4.20E-03 |
| 63 | GO:0016844: strictosidine synthase activity | 4.71E-03 |
| 64 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.71E-03 |
| 65 | GO:0015386: potassium:proton antiporter activity | 5.79E-03 |
| 66 | GO:0051287: NAD binding | 6.31E-03 |
| 67 | GO:0015198: oligopeptide transporter activity | 6.35E-03 |
| 68 | GO:0004439: phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity | 6.35E-03 |
| 69 | GO:0004089: carbonate dehydratase activity | 6.94E-03 |
| 70 | GO:0031072: heat shock protein binding | 6.94E-03 |
| 71 | GO:0010329: auxin efflux transmembrane transporter activity | 6.94E-03 |
| 72 | GO:0005315: inorganic phosphate transmembrane transporter activity | 6.94E-03 |
| 73 | GO:0051119: sugar transmembrane transporter activity | 8.18E-03 |
| 74 | GO:0031409: pigment binding | 8.82E-03 |
| 75 | GO:0015079: potassium ion transmembrane transporter activity | 1.02E-02 |
| 76 | GO:0008810: cellulase activity | 1.23E-02 |
| 77 | GO:0003727: single-stranded RNA binding | 1.31E-02 |
| 78 | GO:0005524: ATP binding | 1.32E-02 |
| 79 | GO:0005249: voltage-gated potassium channel activity | 1.46E-02 |
| 80 | GO:0030551: cyclic nucleotide binding | 1.46E-02 |
| 81 | GO:0008080: N-acetyltransferase activity | 1.54E-02 |
| 82 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 1.62E-02 |
| 83 | GO:0015299: solute:proton antiporter activity | 1.62E-02 |
| 84 | GO:0046910: pectinesterase inhibitor activity | 1.62E-02 |
| 85 | GO:0004872: receptor activity | 1.70E-02 |
| 86 | GO:0004518: nuclease activity | 1.87E-02 |
| 87 | GO:0005215: transporter activity | 1.91E-02 |
| 88 | GO:0000156: phosphorelay response regulator activity | 1.96E-02 |
| 89 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.14E-02 |
| 90 | GO:0016597: amino acid binding | 2.23E-02 |
| 91 | GO:0016168: chlorophyll binding | 2.42E-02 |
| 92 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.71E-02 |
| 93 | GO:0016788: hydrolase activity, acting on ester bonds | 2.74E-02 |
| 94 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 3.25E-02 |
| 95 | GO:0005507: copper ion binding | 3.57E-02 |
| 96 | GO:0052689: carboxylic ester hydrolase activity | 3.68E-02 |
| 97 | GO:0004871: signal transducer activity | 4.17E-02 |
| 98 | GO:0042803: protein homodimerization activity | 4.17E-02 |
| 99 | GO:0051537: 2 iron, 2 sulfur cluster binding | 4.21E-02 |
| 100 | GO:0043621: protein self-association | 4.21E-02 |
| 101 | GO:0005525: GTP binding | 4.26E-02 |
| 102 | GO:0015293: symporter activity | 4.32E-02 |