Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G39270

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0032499: detection of peptidoglycan0.00E+00
2GO:0006182: cGMP biosynthetic process0.00E+00
3GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
4GO:1902001: fatty acid transmembrane transport0.00E+00
5GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
6GO:0046680: response to DDT0.00E+00
7GO:0006983: ER overload response0.00E+00
8GO:0006468: protein phosphorylation6.66E-11
9GO:0007166: cell surface receptor signaling pathway6.08E-07
10GO:0010112: regulation of systemic acquired resistance2.02E-05
11GO:0060548: negative regulation of cell death6.97E-05
12GO:1902065: response to L-glutamate3.32E-04
13GO:0032491: detection of molecule of fungal origin3.32E-04
14GO:0042350: GDP-L-fucose biosynthetic process3.32E-04
15GO:0019567: arabinose biosynthetic process3.32E-04
16GO:0015969: guanosine tetraphosphate metabolic process3.32E-04
17GO:0033306: phytol metabolic process3.32E-04
18GO:0000032: cell wall mannoprotein biosynthetic process3.32E-04
19GO:0051180: vitamin transport3.32E-04
20GO:0006643: membrane lipid metabolic process3.32E-04
21GO:0030974: thiamine pyrophosphate transport3.32E-04
22GO:0035556: intracellular signal transduction5.32E-04
23GO:0042742: defense response to bacterium6.93E-04
24GO:0071668: plant-type cell wall assembly7.24E-04
25GO:0002221: pattern recognition receptor signaling pathway7.24E-04
26GO:0080185: effector dependent induction by symbiont of host immune response7.24E-04
27GO:0080181: lateral root branching7.24E-04
28GO:0055088: lipid homeostasis7.24E-04
29GO:0015908: fatty acid transport7.24E-04
30GO:0044419: interspecies interaction between organisms7.24E-04
31GO:0031349: positive regulation of defense response7.24E-04
32GO:0015893: drug transport7.24E-04
33GO:0051258: protein polymerization7.24E-04
34GO:0060919: auxin influx7.24E-04
35GO:0043066: negative regulation of apoptotic process7.24E-04
36GO:0005976: polysaccharide metabolic process7.24E-04
37GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine7.24E-04
38GO:0018107: peptidyl-threonine phosphorylation1.06E-03
39GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.17E-03
40GO:0033591: response to L-ascorbic acid1.17E-03
41GO:0015695: organic cation transport1.17E-03
42GO:0010498: proteasomal protein catabolic process1.17E-03
43GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.17E-03
44GO:1900055: regulation of leaf senescence1.17E-03
45GO:1900140: regulation of seedling development1.17E-03
46GO:0015031: protein transport1.23E-03
47GO:2000377: regulation of reactive oxygen species metabolic process1.65E-03
48GO:0010116: positive regulation of abscisic acid biosynthetic process1.68E-03
49GO:0046713: borate transport1.68E-03
50GO:0009298: GDP-mannose biosynthetic process1.68E-03
51GO:0072334: UDP-galactose transmembrane transport1.68E-03
52GO:0009226: nucleotide-sugar biosynthetic process1.68E-03
53GO:0015696: ammonium transport1.68E-03
54GO:0048530: fruit morphogenesis1.68E-03
55GO:0071323: cellular response to chitin1.68E-03
56GO:0006470: protein dephosphorylation2.24E-03
57GO:0080142: regulation of salicylic acid biosynthetic process2.26E-03
58GO:0045227: capsule polysaccharide biosynthetic process2.26E-03
59GO:0072488: ammonium transmembrane transport2.26E-03
60GO:0033358: UDP-L-arabinose biosynthetic process2.26E-03
61GO:0022622: root system development2.26E-03
62GO:0071219: cellular response to molecule of bacterial origin2.26E-03
63GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process2.49E-03
64GO:0009229: thiamine diphosphate biosynthetic process2.89E-03
65GO:0034052: positive regulation of plant-type hypersensitive response2.89E-03
66GO:0006014: D-ribose metabolic process3.57E-03
67GO:0010315: auxin efflux3.57E-03
68GO:0009228: thiamine biosynthetic process3.57E-03
69GO:0045491: xylan metabolic process3.57E-03
70GO:0033365: protein localization to organelle3.57E-03
71GO:0009749: response to glucose3.76E-03
72GO:0009737: response to abscisic acid4.21E-03
73GO:0010199: organ boundary specification between lateral organs and the meristem4.30E-03
74GO:0010555: response to mannitol4.30E-03
75GO:2000067: regulation of root morphogenesis4.30E-03
76GO:0009094: L-phenylalanine biosynthetic process4.30E-03
77GO:0031930: mitochondria-nucleus signaling pathway4.30E-03
78GO:0018105: peptidyl-serine phosphorylation4.64E-03
79GO:1902074: response to salt5.07E-03
80GO:0010044: response to aluminum ion5.07E-03
81GO:0046470: phosphatidylcholine metabolic process5.07E-03
82GO:0046777: protein autophosphorylation5.47E-03
83GO:0009787: regulation of abscisic acid-activated signaling pathway5.89E-03
84GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline5.89E-03
85GO:0009819: drought recovery5.89E-03
86GO:0030162: regulation of proteolysis5.89E-03
87GO:0043068: positive regulation of programmed cell death5.89E-03
88GO:0009816: defense response to bacterium, incompatible interaction6.16E-03
89GO:0009808: lignin metabolic process6.76E-03
90GO:0010208: pollen wall assembly6.76E-03
91GO:0007186: G-protein coupled receptor signaling pathway6.76E-03
92GO:0006952: defense response7.27E-03
93GO:0008219: cell death7.61E-03
94GO:0009817: defense response to fungus, incompatible interaction7.61E-03
95GO:0019432: triglyceride biosynthetic process7.67E-03
96GO:0080144: amino acid homeostasis7.67E-03
97GO:0046916: cellular transition metal ion homeostasis7.67E-03
98GO:0010449: root meristem growth8.61E-03
99GO:0007568: aging8.81E-03
100GO:0010150: leaf senescence8.97E-03
101GO:0043069: negative regulation of programmed cell death9.61E-03
102GO:0045087: innate immune response9.66E-03
103GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.04E-02
104GO:0009750: response to fructose1.06E-02
105GO:0000038: very long-chain fatty acid metabolic process1.06E-02
106GO:0019684: photosynthesis, light reaction1.06E-02
107GO:0007165: signal transduction1.09E-02
108GO:0009617: response to bacterium1.12E-02
109GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.17E-02
110GO:0000266: mitochondrial fission1.17E-02
111GO:0009744: response to sucrose1.25E-02
112GO:0006006: glucose metabolic process1.28E-02
113GO:0055046: microgametogenesis1.28E-02
114GO:0006829: zinc II ion transport1.28E-02
115GO:0000209: protein polyubiquitination1.30E-02
116GO:0010540: basipetal auxin transport1.40E-02
117GO:0007034: vacuolar transport1.40E-02
118GO:0010053: root epidermal cell differentiation1.51E-02
119GO:0009225: nucleotide-sugar metabolic process1.51E-02
120GO:0010167: response to nitrate1.51E-02
121GO:0019853: L-ascorbic acid biosynthetic process1.51E-02
122GO:0006970: response to osmotic stress1.72E-02
123GO:0080147: root hair cell development1.76E-02
124GO:0051302: regulation of cell division1.89E-02
125GO:0010431: seed maturation2.02E-02
126GO:0006979: response to oxidative stress2.12E-02
127GO:0010200: response to chitin2.14E-02
128GO:0031348: negative regulation of defense response2.15E-02
129GO:2000022: regulation of jasmonic acid mediated signaling pathway2.15E-02
130GO:0016192: vesicle-mediated transport2.19E-02
131GO:0006012: galactose metabolic process2.29E-02
132GO:0009306: protein secretion2.43E-02
133GO:0010584: pollen exine formation2.43E-02
134GO:0045492: xylan biosynthetic process2.43E-02
135GO:0006284: base-excision repair2.43E-02
136GO:0009561: megagametogenesis2.43E-02
137GO:0009742: brassinosteroid mediated signaling pathway2.55E-02
138GO:0006886: intracellular protein transport2.68E-02
139GO:0080022: primary root development2.72E-02
140GO:0000413: protein peptidyl-prolyl isomerization2.72E-02
141GO:0042391: regulation of membrane potential2.72E-02
142GO:0009646: response to absence of light3.02E-02
143GO:0032259: methylation3.17E-02
144GO:0019252: starch biosynthetic process3.18E-02
145GO:0002229: defense response to oomycetes3.33E-02
146GO:0006891: intra-Golgi vesicle-mediated transport3.33E-02
147GO:0009630: gravitropism3.49E-02
148GO:0007264: small GTPase mediated signal transduction3.49E-02
149GO:0006633: fatty acid biosynthetic process3.78E-02
150GO:0006464: cellular protein modification process3.82E-02
151GO:0016310: phosphorylation3.83E-02
152GO:0006810: transport3.97E-02
153GO:0010286: heat acclimation3.99E-02
154GO:0006904: vesicle docking involved in exocytosis3.99E-02
155GO:0010029: regulation of seed germination4.51E-02
156GO:0009627: systemic acquired resistance4.68E-02
157GO:0006950: response to stress4.86E-02
RankGO TermAdjusted P value
1GO:2001080: chitosan binding0.00E+00
2GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
3GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
4GO:0050220: prostaglandin-E synthase activity0.00E+00
5GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
6GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
7GO:0050334: thiaminase activity0.00E+00
8GO:0016301: kinase activity1.24E-09
9GO:0004674: protein serine/threonine kinase activity1.00E-08
10GO:0005524: ATP binding1.26E-06
11GO:0004675: transmembrane receptor protein serine/threonine kinase activity3.96E-06
12GO:0004672: protein kinase activity4.00E-05
13GO:0033612: receptor serine/threonine kinase binding1.80E-04
14GO:0008320: protein transmembrane transporter activity2.80E-04
15GO:0015245: fatty acid transporter activity3.32E-04
16GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity3.32E-04
17GO:0050577: GDP-L-fucose synthase activity3.32E-04
18GO:1901149: salicylic acid binding3.32E-04
19GO:0090422: thiamine pyrophosphate transporter activity3.32E-04
20GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity3.32E-04
21GO:0004476: mannose-6-phosphate isomerase activity3.32E-04
22GO:0019707: protein-cysteine S-acyltransferase activity3.32E-04
23GO:0004714: transmembrane receptor protein tyrosine kinase activity3.52E-04
24GO:0008728: GTP diphosphokinase activity7.24E-04
25GO:0030775: glucuronoxylan 4-O-methyltransferase activity7.24E-04
26GO:0015036: disulfide oxidoreductase activity7.24E-04
27GO:0043531: ADP binding9.20E-04
28GO:0004383: guanylate cyclase activity1.17E-03
29GO:0001664: G-protein coupled receptor binding1.17E-03
30GO:0031683: G-protein beta/gamma-subunit complex binding1.17E-03
31GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity1.68E-03
32GO:0004871: signal transducer activity1.70E-03
33GO:0019706: protein-cysteine S-palmitoyltransferase activity2.00E-03
34GO:0050373: UDP-arabinose 4-epimerase activity2.26E-03
35GO:0047769: arogenate dehydratase activity2.26E-03
36GO:0004664: prephenate dehydratase activity2.26E-03
37GO:0010328: auxin influx transmembrane transporter activity2.26E-03
38GO:0019199: transmembrane receptor protein kinase activity2.26E-03
39GO:0008725: DNA-3-methyladenine glycosylase activity2.89E-03
40GO:0005459: UDP-galactose transmembrane transporter activity2.89E-03
41GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.89E-03
42GO:0008519: ammonium transmembrane transporter activity3.57E-03
43GO:0004709: MAP kinase kinase kinase activity3.57E-03
44GO:0004656: procollagen-proline 4-dioxygenase activity4.30E-03
45GO:0019900: kinase binding4.30E-03
46GO:0102391: decanoate--CoA ligase activity4.30E-03
47GO:0004747: ribokinase activity4.30E-03
48GO:0003978: UDP-glucose 4-epimerase activity4.30E-03
49GO:0004144: diacylglycerol O-acyltransferase activity4.30E-03
50GO:0004467: long-chain fatty acid-CoA ligase activity5.07E-03
51GO:0008865: fructokinase activity5.89E-03
52GO:0008375: acetylglucosaminyltransferase activity6.51E-03
53GO:0004630: phospholipase D activity6.76E-03
54GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity6.76E-03
55GO:0008565: protein transporter activity7.48E-03
56GO:0008138: protein tyrosine/serine/threonine phosphatase activity7.67E-03
57GO:0008171: O-methyltransferase activity9.61E-03
58GO:0004713: protein tyrosine kinase activity9.61E-03
59GO:0008559: xenobiotic-transporting ATPase activity1.06E-02
60GO:0004712: protein serine/threonine/tyrosine kinase activity1.06E-02
61GO:0015198: oligopeptide transporter activity1.17E-02
62GO:0031072: heat shock protein binding1.28E-02
63GO:0010329: auxin efflux transmembrane transporter activity1.28E-02
64GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism1.28E-02
65GO:0030552: cAMP binding1.51E-02
66GO:0030553: cGMP binding1.51E-02
67GO:0008061: chitin binding1.51E-02
68GO:0004725: protein tyrosine phosphatase activity1.63E-02
69GO:0031418: L-ascorbic acid binding1.76E-02
70GO:0003954: NADH dehydrogenase activity1.76E-02
71GO:0005509: calcium ion binding1.83E-02
72GO:0031625: ubiquitin protein ligase binding1.87E-02
73GO:0005216: ion channel activity1.89E-02
74GO:0008324: cation transmembrane transporter activity1.89E-02
75GO:0061630: ubiquitin protein ligase activity2.19E-02
76GO:0003824: catalytic activity2.45E-02
77GO:0005249: voltage-gated potassium channel activity2.72E-02
78GO:0030551: cyclic nucleotide binding2.72E-02
79GO:0046873: metal ion transmembrane transporter activity2.87E-02
80GO:0004722: protein serine/threonine phosphatase activity2.89E-02
81GO:0016853: isomerase activity3.02E-02
82GO:0050662: coenzyme binding3.02E-02
83GO:0019901: protein kinase binding3.18E-02
84GO:0004197: cysteine-type endopeptidase activity3.49E-02
85GO:0015144: carbohydrate transmembrane transporter activity3.60E-02
86GO:0005516: calmodulin binding3.86E-02
87GO:0005351: sugar:proton symporter activity4.05E-02
88GO:0016597: amino acid binding4.16E-02
89GO:0009931: calcium-dependent protein serine/threonine kinase activity4.68E-02
90GO:0004683: calmodulin-dependent protein kinase activity4.86E-02
91GO:0030247: polysaccharide binding4.86E-02
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Gene type



Gene DE type