GO Enrichment Analysis of Co-expressed Genes with
AT4G39235
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 2 | GO:0032928: regulation of superoxide anion generation | 0.00E+00 |
| 3 | GO:0000476: maturation of 4.5S rRNA | 4.60E-05 |
| 4 | GO:0000967: rRNA 5'-end processing | 4.60E-05 |
| 5 | GO:0031426: polycistronic mRNA processing | 4.60E-05 |
| 6 | GO:0000481: maturation of 5S rRNA | 4.60E-05 |
| 7 | GO:0043686: co-translational protein modification | 4.60E-05 |
| 8 | GO:1902458: positive regulation of stomatal opening | 4.60E-05 |
| 9 | GO:0034337: RNA folding | 4.60E-05 |
| 10 | GO:0016122: xanthophyll metabolic process | 1.13E-04 |
| 11 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 1.13E-04 |
| 12 | GO:0034470: ncRNA processing | 1.13E-04 |
| 13 | GO:0010589: leaf proximal/distal pattern formation | 1.95E-04 |
| 14 | GO:0051604: protein maturation | 1.95E-04 |
| 15 | GO:0009052: pentose-phosphate shunt, non-oxidative branch | 2.85E-04 |
| 16 | GO:0009152: purine ribonucleotide biosynthetic process | 2.85E-04 |
| 17 | GO:0046653: tetrahydrofolate metabolic process | 2.85E-04 |
| 18 | GO:0010239: chloroplast mRNA processing | 2.85E-04 |
| 19 | GO:0006021: inositol biosynthetic process | 3.84E-04 |
| 20 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 3.84E-04 |
| 21 | GO:0008295: spermidine biosynthetic process | 3.84E-04 |
| 22 | GO:0010027: thylakoid membrane organization | 4.15E-04 |
| 23 | GO:0010117: photoprotection | 4.88E-04 |
| 24 | GO:0010236: plastoquinone biosynthetic process | 4.88E-04 |
| 25 | GO:0045038: protein import into chloroplast thylakoid membrane | 4.88E-04 |
| 26 | GO:0031365: N-terminal protein amino acid modification | 4.88E-04 |
| 27 | GO:0046855: inositol phosphate dephosphorylation | 5.98E-04 |
| 28 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 8.33E-04 |
| 29 | GO:0032508: DNA duplex unwinding | 9.57E-04 |
| 30 | GO:2000070: regulation of response to water deprivation | 9.57E-04 |
| 31 | GO:0015996: chlorophyll catabolic process | 1.09E-03 |
| 32 | GO:0007186: G-protein coupled receptor signaling pathway | 1.09E-03 |
| 33 | GO:0048507: meristem development | 1.22E-03 |
| 34 | GO:0010267: production of ta-siRNAs involved in RNA interference | 1.36E-03 |
| 35 | GO:0006535: cysteine biosynthetic process from serine | 1.51E-03 |
| 36 | GO:0009688: abscisic acid biosynthetic process | 1.51E-03 |
| 37 | GO:0006790: sulfur compound metabolic process | 1.81E-03 |
| 38 | GO:0045037: protein import into chloroplast stroma | 1.81E-03 |
| 39 | GO:0030048: actin filament-based movement | 1.98E-03 |
| 40 | GO:0010207: photosystem II assembly | 2.14E-03 |
| 41 | GO:0009266: response to temperature stimulus | 2.14E-03 |
| 42 | GO:0019853: L-ascorbic acid biosynthetic process | 2.31E-03 |
| 43 | GO:0046854: phosphatidylinositol phosphorylation | 2.31E-03 |
| 44 | GO:0006289: nucleotide-excision repair | 2.67E-03 |
| 45 | GO:0019344: cysteine biosynthetic process | 2.67E-03 |
| 46 | GO:0010073: meristem maintenance | 2.85E-03 |
| 47 | GO:0010017: red or far-red light signaling pathway | 3.23E-03 |
| 48 | GO:0019722: calcium-mediated signaling | 3.63E-03 |
| 49 | GO:0010182: sugar mediated signaling pathway | 4.25E-03 |
| 50 | GO:0010305: leaf vascular tissue pattern formation | 4.25E-03 |
| 51 | GO:0009791: post-embryonic development | 4.68E-03 |
| 52 | GO:0007267: cell-cell signaling | 5.84E-03 |
| 53 | GO:0016126: sterol biosynthetic process | 6.32E-03 |
| 54 | GO:0000160: phosphorelay signal transduction system | 7.87E-03 |
| 55 | GO:0009853: photorespiration | 8.96E-03 |
| 56 | GO:0006396: RNA processing | 1.73E-02 |
| 57 | GO:0009742: brassinosteroid mediated signaling pathway | 1.77E-02 |
| 58 | GO:0009058: biosynthetic process | 2.07E-02 |
| 59 | GO:0006413: translational initiation | 2.38E-02 |
| 60 | GO:0007623: circadian rhythm | 2.50E-02 |
| 61 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 2.71E-02 |
| 62 | GO:0007166: cell surface receptor signaling pathway | 2.75E-02 |
| 63 | GO:0010468: regulation of gene expression | 2.84E-02 |
| 64 | GO:0015031: protein transport | 3.52E-02 |
| 65 | GO:0009409: response to cold | 3.75E-02 |
| 66 | GO:0080167: response to karrikin | 3.98E-02 |
| 67 | GO:0016192: vesicle-mediated transport | 4.13E-02 |
| 68 | GO:0046777: protein autophosphorylation | 4.18E-02 |
| 69 | GO:0015979: photosynthesis | 4.37E-02 |
| 70 | GO:0045892: negative regulation of transcription, DNA-templated | 4.57E-02 |
| 71 | GO:0006886: intracellular protein transport | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 2 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 3 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 4.60E-05 |
| 4 | GO:0042586: peptide deformylase activity | 4.60E-05 |
| 5 | GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity | 1.13E-04 |
| 6 | GO:0050017: L-3-cyanoalanine synthase activity | 1.13E-04 |
| 7 | GO:0004766: spermidine synthase activity | 1.13E-04 |
| 8 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.13E-04 |
| 9 | GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity | 1.13E-04 |
| 10 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.13E-04 |
| 11 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.13E-04 |
| 12 | GO:0004751: ribose-5-phosphate isomerase activity | 1.95E-04 |
| 13 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.95E-04 |
| 14 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.95E-04 |
| 15 | GO:0035198: miRNA binding | 2.85E-04 |
| 16 | GO:0048027: mRNA 5'-UTR binding | 2.85E-04 |
| 17 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 2.85E-04 |
| 18 | GO:0070628: proteasome binding | 3.84E-04 |
| 19 | GO:0031593: polyubiquitin binding | 5.98E-04 |
| 20 | GO:0004124: cysteine synthase activity | 7.13E-04 |
| 21 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 7.13E-04 |
| 22 | GO:0009927: histidine phosphotransfer kinase activity | 7.13E-04 |
| 23 | GO:0004525: ribonuclease III activity | 9.57E-04 |
| 24 | GO:0003725: double-stranded RNA binding | 1.98E-03 |
| 25 | GO:0003774: motor activity | 2.14E-03 |
| 26 | GO:0043130: ubiquitin binding | 2.67E-03 |
| 27 | GO:0051087: chaperone binding | 2.85E-03 |
| 28 | GO:0008080: N-acetyltransferase activity | 4.25E-03 |
| 29 | GO:0000156: phosphorelay response regulator activity | 5.37E-03 |
| 30 | GO:0003684: damaged DNA binding | 5.60E-03 |
| 31 | GO:0042803: protein homodimerization activity | 6.53E-03 |
| 32 | GO:0008236: serine-type peptidase activity | 7.34E-03 |
| 33 | GO:0016491: oxidoreductase activity | 7.54E-03 |
| 34 | GO:0005198: structural molecule activity | 1.16E-02 |
| 35 | GO:0016298: lipase activity | 1.35E-02 |
| 36 | GO:0030170: pyridoxal phosphate binding | 2.14E-02 |
| 37 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.38E-02 |
| 38 | GO:0005515: protein binding | 2.67E-02 |
| 39 | GO:0003743: translation initiation factor activity | 2.80E-02 |
| 40 | GO:0008168: methyltransferase activity | 3.32E-02 |
| 41 | GO:0046982: protein heterodimerization activity | 3.37E-02 |
| 42 | GO:0004601: peroxidase activity | 3.42E-02 |
| 43 | GO:0016788: hydrolase activity, acting on ester bonds | 3.46E-02 |
| 44 | GO:0008233: peptidase activity | 3.93E-02 |
| 45 | GO:0052689: carboxylic ester hydrolase activity | 4.27E-02 |
| 46 | GO:0004871: signal transducer activity | 4.68E-02 |