GO Enrichment Analysis of Co-expressed Genes with
AT4G38970
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1905157: positive regulation of photosynthesis | 0.00E+00 |
| 2 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 3 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 4 | GO:2000042: negative regulation of double-strand break repair via homologous recombination | 0.00E+00 |
| 5 | GO:0005996: monosaccharide metabolic process | 0.00E+00 |
| 6 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 7 | GO:0015717: triose phosphate transport | 0.00E+00 |
| 8 | GO:0015670: carbon dioxide transport | 0.00E+00 |
| 9 | GO:0055114: oxidation-reduction process | 2.83E-07 |
| 10 | GO:0015995: chlorophyll biosynthetic process | 8.45E-07 |
| 11 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.77E-06 |
| 12 | GO:0006000: fructose metabolic process | 6.53E-06 |
| 13 | GO:0006094: gluconeogenesis | 2.00E-05 |
| 14 | GO:0019253: reductive pentose-phosphate cycle | 2.45E-05 |
| 15 | GO:0006546: glycine catabolic process | 2.77E-05 |
| 16 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.55E-05 |
| 17 | GO:0009643: photosynthetic acclimation | 6.61E-05 |
| 18 | GO:0009772: photosynthetic electron transport in photosystem II | 1.22E-04 |
| 19 | GO:0009704: de-etiolation | 1.56E-04 |
| 20 | GO:0009658: chloroplast organization | 1.82E-04 |
| 21 | GO:0046167: glycerol-3-phosphate biosynthetic process | 1.93E-04 |
| 22 | GO:0043007: maintenance of rDNA | 1.93E-04 |
| 23 | GO:0015969: guanosine tetraphosphate metabolic process | 1.93E-04 |
| 24 | GO:0051180: vitamin transport | 1.93E-04 |
| 25 | GO:0030974: thiamine pyrophosphate transport | 1.93E-04 |
| 26 | GO:0046467: membrane lipid biosynthetic process | 1.93E-04 |
| 27 | GO:0071277: cellular response to calcium ion | 1.93E-04 |
| 28 | GO:0080051: cutin transport | 1.93E-04 |
| 29 | GO:0071461: cellular response to redox state | 1.93E-04 |
| 30 | GO:0006002: fructose 6-phosphate metabolic process | 1.95E-04 |
| 31 | GO:0006754: ATP biosynthetic process | 2.36E-04 |
| 32 | GO:0080005: photosystem stoichiometry adjustment | 4.33E-04 |
| 33 | GO:0015908: fatty acid transport | 4.33E-04 |
| 34 | GO:0015893: drug transport | 4.33E-04 |
| 35 | GO:0006650: glycerophospholipid metabolic process | 4.33E-04 |
| 36 | GO:0005986: sucrose biosynthetic process | 5.01E-04 |
| 37 | GO:0010143: cutin biosynthetic process | 5.65E-04 |
| 38 | GO:0010207: photosystem II assembly | 5.65E-04 |
| 39 | GO:0006631: fatty acid metabolic process | 6.61E-04 |
| 40 | GO:0006833: water transport | 7.02E-04 |
| 41 | GO:0010025: wax biosynthetic process | 7.02E-04 |
| 42 | GO:0046168: glycerol-3-phosphate catabolic process | 7.06E-04 |
| 43 | GO:0035436: triose phosphate transmembrane transport | 7.06E-04 |
| 44 | GO:0044375: regulation of peroxisome size | 7.06E-04 |
| 45 | GO:0006072: glycerol-3-phosphate metabolic process | 1.01E-03 |
| 46 | GO:0042823: pyridoxal phosphate biosynthetic process | 1.01E-03 |
| 47 | GO:2001141: regulation of RNA biosynthetic process | 1.01E-03 |
| 48 | GO:0019722: calcium-mediated signaling | 1.20E-03 |
| 49 | GO:0010222: stem vascular tissue pattern formation | 1.34E-03 |
| 50 | GO:0015689: molybdate ion transport | 1.34E-03 |
| 51 | GO:0019464: glycine decarboxylation via glycine cleavage system | 1.34E-03 |
| 52 | GO:0045727: positive regulation of translation | 1.34E-03 |
| 53 | GO:0010600: regulation of auxin biosynthetic process | 1.34E-03 |
| 54 | GO:0031122: cytoplasmic microtubule organization | 1.34E-03 |
| 55 | GO:0015713: phosphoglycerate transport | 1.34E-03 |
| 56 | GO:0034220: ion transmembrane transport | 1.40E-03 |
| 57 | GO:0044550: secondary metabolite biosynthetic process | 1.69E-03 |
| 58 | GO:0009107: lipoate biosynthetic process | 1.70E-03 |
| 59 | GO:0016123: xanthophyll biosynthetic process | 1.70E-03 |
| 60 | GO:0006465: signal peptide processing | 1.70E-03 |
| 61 | GO:0019252: starch biosynthetic process | 1.73E-03 |
| 62 | GO:0042549: photosystem II stabilization | 2.10E-03 |
| 63 | GO:0007267: cell-cell signaling | 2.38E-03 |
| 64 | GO:0010019: chloroplast-nucleus signaling pathway | 2.52E-03 |
| 65 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.52E-03 |
| 66 | GO:0045926: negative regulation of growth | 2.52E-03 |
| 67 | GO:0000054: ribosomal subunit export from nucleus | 2.52E-03 |
| 68 | GO:0017148: negative regulation of translation | 2.52E-03 |
| 69 | GO:0010189: vitamin E biosynthetic process | 2.52E-03 |
| 70 | GO:0032259: methylation | 2.52E-03 |
| 71 | GO:0009854: oxidative photosynthetic carbon pathway | 2.52E-03 |
| 72 | GO:0006633: fatty acid biosynthetic process | 2.92E-03 |
| 73 | GO:0010161: red light signaling pathway | 2.96E-03 |
| 74 | GO:1900056: negative regulation of leaf senescence | 2.96E-03 |
| 75 | GO:0006400: tRNA modification | 2.96E-03 |
| 76 | GO:0010411: xyloglucan metabolic process | 3.14E-03 |
| 77 | GO:0016559: peroxisome fission | 3.43E-03 |
| 78 | GO:0019827: stem cell population maintenance | 3.43E-03 |
| 79 | GO:0010928: regulation of auxin mediated signaling pathway | 3.43E-03 |
| 80 | GO:0008610: lipid biosynthetic process | 3.43E-03 |
| 81 | GO:0009690: cytokinin metabolic process | 3.43E-03 |
| 82 | GO:2000031: regulation of salicylic acid mediated signaling pathway | 3.93E-03 |
| 83 | GO:0009932: cell tip growth | 3.93E-03 |
| 84 | GO:0071482: cellular response to light stimulus | 3.93E-03 |
| 85 | GO:0009657: plastid organization | 3.93E-03 |
| 86 | GO:0032544: plastid translation | 3.93E-03 |
| 87 | GO:0006098: pentose-phosphate shunt | 4.44E-03 |
| 88 | GO:0009821: alkaloid biosynthetic process | 4.44E-03 |
| 89 | GO:0090305: nucleic acid phosphodiester bond hydrolysis | 4.44E-03 |
| 90 | GO:0090333: regulation of stomatal closure | 4.44E-03 |
| 91 | GO:0010205: photoinhibition | 4.99E-03 |
| 92 | GO:0010380: regulation of chlorophyll biosynthetic process | 4.99E-03 |
| 93 | GO:0042742: defense response to bacterium | 5.32E-03 |
| 94 | GO:0009641: shade avoidance | 5.55E-03 |
| 95 | GO:0019538: protein metabolic process | 5.55E-03 |
| 96 | GO:0009688: abscisic acid biosynthetic process | 5.55E-03 |
| 97 | GO:0043069: negative regulation of programmed cell death | 5.55E-03 |
| 98 | GO:0009744: response to sucrose | 5.66E-03 |
| 99 | GO:0010114: response to red light | 5.66E-03 |
| 100 | GO:0042546: cell wall biogenesis | 5.89E-03 |
| 101 | GO:0009773: photosynthetic electron transport in photosystem I | 6.13E-03 |
| 102 | GO:0043085: positive regulation of catalytic activity | 6.13E-03 |
| 103 | GO:0006415: translational termination | 6.13E-03 |
| 104 | GO:0006352: DNA-templated transcription, initiation | 6.13E-03 |
| 105 | GO:0000272: polysaccharide catabolic process | 6.13E-03 |
| 106 | GO:0018119: peptidyl-cysteine S-nitrosylation | 6.13E-03 |
| 107 | GO:0016485: protein processing | 6.13E-03 |
| 108 | GO:0002213: defense response to insect | 6.73E-03 |
| 109 | GO:0018107: peptidyl-threonine phosphorylation | 7.36E-03 |
| 110 | GO:0009725: response to hormone | 7.36E-03 |
| 111 | GO:0010588: cotyledon vascular tissue pattern formation | 7.36E-03 |
| 112 | GO:0006006: glucose metabolic process | 7.36E-03 |
| 113 | GO:0009585: red, far-red light phototransduction | 7.63E-03 |
| 114 | GO:0010223: secondary shoot formation | 8.01E-03 |
| 115 | GO:0007031: peroxisome organization | 8.67E-03 |
| 116 | GO:0042343: indole glucosinolate metabolic process | 8.67E-03 |
| 117 | GO:0005985: sucrose metabolic process | 8.67E-03 |
| 118 | GO:0015979: photosynthesis | 8.92E-03 |
| 119 | GO:0006096: glycolytic process | 9.03E-03 |
| 120 | GO:0009833: plant-type primary cell wall biogenesis | 9.35E-03 |
| 121 | GO:0019762: glucosinolate catabolic process | 9.35E-03 |
| 122 | GO:0006810: transport | 1.04E-02 |
| 123 | GO:0009695: jasmonic acid biosynthetic process | 1.08E-02 |
| 124 | GO:0098542: defense response to other organism | 1.15E-02 |
| 125 | GO:0061077: chaperone-mediated protein folding | 1.15E-02 |
| 126 | GO:0031408: oxylipin biosynthetic process | 1.15E-02 |
| 127 | GO:0046686: response to cadmium ion | 1.15E-02 |
| 128 | GO:0010017: red or far-red light signaling pathway | 1.23E-02 |
| 129 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.23E-02 |
| 130 | GO:0030433: ubiquitin-dependent ERAD pathway | 1.23E-02 |
| 131 | GO:0009408: response to heat | 1.24E-02 |
| 132 | GO:0006817: phosphate ion transport | 1.39E-02 |
| 133 | GO:0009306: protein secretion | 1.39E-02 |
| 134 | GO:0042631: cellular response to water deprivation | 1.55E-02 |
| 135 | GO:0010182: sugar mediated signaling pathway | 1.63E-02 |
| 136 | GO:0009741: response to brassinosteroid | 1.63E-02 |
| 137 | GO:0006520: cellular amino acid metabolic process | 1.63E-02 |
| 138 | GO:0007059: chromosome segregation | 1.72E-02 |
| 139 | GO:0015986: ATP synthesis coupled proton transport | 1.72E-02 |
| 140 | GO:0006413: translational initiation | 1.76E-02 |
| 141 | GO:0009414: response to water deprivation | 1.80E-02 |
| 142 | GO:0008654: phospholipid biosynthetic process | 1.81E-02 |
| 143 | GO:0071555: cell wall organization | 1.86E-02 |
| 144 | GO:0007623: circadian rhythm | 1.89E-02 |
| 145 | GO:0009737: response to abscisic acid | 1.97E-02 |
| 146 | GO:0032502: developmental process | 1.99E-02 |
| 147 | GO:0007264: small GTPase mediated signal transduction | 1.99E-02 |
| 148 | GO:0010583: response to cyclopentenone | 1.99E-02 |
| 149 | GO:0009735: response to cytokinin | 2.28E-02 |
| 150 | GO:0051607: defense response to virus | 2.37E-02 |
| 151 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 2.57E-02 |
| 152 | GO:0042128: nitrate assimilation | 2.67E-02 |
| 153 | GO:0009409: response to cold | 2.92E-02 |
| 154 | GO:0030244: cellulose biosynthetic process | 2.98E-02 |
| 155 | GO:0045893: positive regulation of transcription, DNA-templated | 3.03E-02 |
| 156 | GO:0000160: phosphorelay signal transduction system | 3.09E-02 |
| 157 | GO:0010311: lateral root formation | 3.09E-02 |
| 158 | GO:0006499: N-terminal protein myristoylation | 3.20E-02 |
| 159 | GO:0007568: aging | 3.31E-02 |
| 160 | GO:0009910: negative regulation of flower development | 3.31E-02 |
| 161 | GO:0055085: transmembrane transport | 3.43E-02 |
| 162 | GO:0005975: carbohydrate metabolic process | 3.45E-02 |
| 163 | GO:0009853: photorespiration | 3.53E-02 |
| 164 | GO:0016051: carbohydrate biosynthetic process | 3.53E-02 |
| 165 | GO:0034599: cellular response to oxidative stress | 3.64E-02 |
| 166 | GO:0006839: mitochondrial transport | 3.87E-02 |
| 167 | GO:0009651: response to salt stress | 4.19E-02 |
| 168 | GO:0000209: protein polyubiquitination | 4.35E-02 |
| 169 | GO:0042538: hyperosmotic salinity response | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 2 | GO:0004768: stearoyl-CoA 9-desaturase activity | 0.00E+00 |
| 3 | GO:0102193: protein-ribulosamine 3-kinase activity | 0.00E+00 |
| 4 | GO:0035798: 2-alkenal reductase (NADP+) activity | 0.00E+00 |
| 5 | GO:0009540: zeaxanthin epoxidase [overall] activity | 0.00E+00 |
| 6 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 7 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 8 | GO:0009673: low-affinity phosphate transmembrane transporter activity | 0.00E+00 |
| 9 | GO:0036361: racemase activity, acting on amino acids and derivatives | 0.00E+00 |
| 10 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 11 | GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity | 0.00E+00 |
| 12 | GO:0033840: NDP-glucose-starch glucosyltransferase activity | 0.00E+00 |
| 13 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 14 | GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives | 0.00E+00 |
| 15 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.77E-06 |
| 16 | GO:0018708: thiol S-methyltransferase activity | 1.77E-06 |
| 17 | GO:0035671: enone reductase activity | 1.93E-04 |
| 18 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 1.93E-04 |
| 19 | GO:0046906: tetrapyrrole binding | 1.93E-04 |
| 20 | GO:0030794: (S)-coclaurine-N-methyltransferase activity | 1.93E-04 |
| 21 | GO:0090422: thiamine pyrophosphate transporter activity | 1.93E-04 |
| 22 | GO:0080132: fatty acid alpha-hydroxylase activity | 1.93E-04 |
| 23 | GO:0008568: microtubule-severing ATPase activity | 1.93E-04 |
| 24 | GO:0016618: hydroxypyruvate reductase activity | 1.93E-04 |
| 25 | GO:0010313: phytochrome binding | 1.93E-04 |
| 26 | GO:0031957: very long-chain fatty acid-CoA ligase activity | 1.93E-04 |
| 27 | GO:0015245: fatty acid transporter activity | 1.93E-04 |
| 28 | GO:0010297: heteropolysaccharide binding | 4.33E-04 |
| 29 | GO:0004047: aminomethyltransferase activity | 4.33E-04 |
| 30 | GO:0043024: ribosomal small subunit binding | 4.33E-04 |
| 31 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 4.33E-04 |
| 32 | GO:0008728: GTP diphosphokinase activity | 4.33E-04 |
| 33 | GO:0004565: beta-galactosidase activity | 5.01E-04 |
| 34 | GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity | 7.06E-04 |
| 35 | GO:0071917: triose-phosphate transmembrane transporter activity | 7.06E-04 |
| 36 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 7.06E-04 |
| 37 | GO:0004373: glycogen (starch) synthase activity | 7.06E-04 |
| 38 | GO:0050734: hydroxycinnamoyltransferase activity | 7.06E-04 |
| 39 | GO:0016992: lipoate synthase activity | 7.06E-04 |
| 40 | GO:0030267: glyoxylate reductase (NADP) activity | 7.06E-04 |
| 41 | GO:0016491: oxidoreductase activity | 7.14E-04 |
| 42 | GO:0051287: NAD binding | 9.29E-04 |
| 43 | GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity | 1.01E-03 |
| 44 | GO:0004375: glycine dehydrogenase (decarboxylating) activity | 1.01E-03 |
| 45 | GO:0048027: mRNA 5'-UTR binding | 1.01E-03 |
| 46 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.01E-03 |
| 47 | GO:0022890: inorganic cation transmembrane transporter activity | 1.01E-03 |
| 48 | GO:0016851: magnesium chelatase activity | 1.01E-03 |
| 49 | GO:0016887: ATPase activity | 1.21E-03 |
| 50 | GO:0001053: plastid sigma factor activity | 1.34E-03 |
| 51 | GO:0016987: sigma factor activity | 1.34E-03 |
| 52 | GO:0009011: starch synthase activity | 1.34E-03 |
| 53 | GO:0015098: molybdate ion transmembrane transporter activity | 1.34E-03 |
| 54 | GO:0015120: phosphoglycerate transmembrane transporter activity | 1.34E-03 |
| 55 | GO:0005506: iron ion binding | 1.41E-03 |
| 56 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 1.70E-03 |
| 57 | GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | 1.70E-03 |
| 58 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 1.85E-03 |
| 59 | GO:0004518: nuclease activity | 1.98E-03 |
| 60 | GO:0004332: fructose-bisphosphate aldolase activity | 2.10E-03 |
| 61 | GO:0042578: phosphoric ester hydrolase activity | 2.10E-03 |
| 62 | GO:0102391: decanoate--CoA ligase activity | 2.52E-03 |
| 63 | GO:0015250: water channel activity | 2.67E-03 |
| 64 | GO:0004467: long-chain fatty acid-CoA ligase activity | 2.96E-03 |
| 65 | GO:0019899: enzyme binding | 2.96E-03 |
| 66 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.14E-03 |
| 67 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 3.93E-03 |
| 68 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 4.44E-03 |
| 69 | GO:0071949: FAD binding | 4.44E-03 |
| 70 | GO:0042626: ATPase activity, coupled to transmembrane movement of substances | 4.46E-03 |
| 71 | GO:0016844: strictosidine synthase activity | 4.99E-03 |
| 72 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 4.99E-03 |
| 73 | GO:0008168: methyltransferase activity | 5.46E-03 |
| 74 | GO:0030234: enzyme regulator activity | 5.55E-03 |
| 75 | GO:0051537: 2 iron, 2 sulfur cluster binding | 6.12E-03 |
| 76 | GO:0015386: potassium:proton antiporter activity | 6.13E-03 |
| 77 | GO:0005215: transporter activity | 6.34E-03 |
| 78 | GO:0031072: heat shock protein binding | 7.36E-03 |
| 79 | GO:0005315: inorganic phosphate transmembrane transporter activity | 7.36E-03 |
| 80 | GO:0052689: carboxylic ester hydrolase activity | 8.56E-03 |
| 81 | GO:0004871: signal transducer activity | 1.01E-02 |
| 82 | GO:0005528: FK506 binding | 1.01E-02 |
| 83 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.05E-02 |
| 84 | GO:0015079: potassium ion transmembrane transporter activity | 1.08E-02 |
| 85 | GO:0016760: cellulose synthase (UDP-forming) activity | 1.31E-02 |
| 86 | GO:0003727: single-stranded RNA binding | 1.39E-02 |
| 87 | GO:0008080: N-acetyltransferase activity | 1.63E-02 |
| 88 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 1.63E-02 |
| 89 | GO:0015299: solute:proton antiporter activity | 1.72E-02 |
| 90 | GO:0050662: coenzyme binding | 1.72E-02 |
| 91 | GO:0004872: receptor activity | 1.81E-02 |
| 92 | GO:0000156: phosphorelay response regulator activity | 2.08E-02 |
| 93 | GO:0016759: cellulose synthase activity | 2.18E-02 |
| 94 | GO:0008483: transaminase activity | 2.27E-02 |
| 95 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 2.27E-02 |
| 96 | GO:0042802: identical protein binding | 2.40E-02 |
| 97 | GO:0008757: S-adenosylmethionine-dependent methyltransferase activity | 2.88E-02 |
| 98 | GO:0005524: ATP binding | 3.22E-02 |
| 99 | GO:0004672: protein kinase activity | 3.29E-02 |
| 100 | GO:0050661: NADP binding | 3.87E-02 |
| 101 | GO:0051539: 4 iron, 4 sulfur cluster binding | 3.87E-02 |
| 102 | GO:0005507: copper ion binding | 3.96E-02 |
| 103 | GO:0019825: oxygen binding | 3.96E-02 |
| 104 | GO:0043621: protein self-association | 4.47E-02 |
| 105 | GO:0042803: protein homodimerization activity | 4.53E-02 |
| 106 | GO:0015293: symporter activity | 4.59E-02 |
| 107 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 4.71E-02 |