GO Enrichment Analysis of Co-expressed Genes with
AT4G38225
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 2 | GO:0006167: AMP biosynthetic process | 0.00E+00 |
| 3 | GO:0009106: lipoate metabolic process | 0.00E+00 |
| 4 | GO:0033614: chloroplast proton-transporting ATP synthase complex assembly | 0.00E+00 |
| 5 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 6 | GO:0046040: IMP metabolic process | 0.00E+00 |
| 7 | GO:0006429: leucyl-tRNA aminoacylation | 0.00E+00 |
| 8 | GO:0009249: protein lipoylation | 0.00E+00 |
| 9 | GO:1900871: chloroplast mRNA modification | 5.49E-07 |
| 10 | GO:0042793: transcription from plastid promoter | 2.35E-05 |
| 11 | GO:0005980: glycogen catabolic process | 1.02E-04 |
| 12 | GO:0000476: maturation of 4.5S rRNA | 1.02E-04 |
| 13 | GO:0000967: rRNA 5'-end processing | 1.02E-04 |
| 14 | GO:0042547: cell wall modification involved in multidimensional cell growth | 1.02E-04 |
| 15 | GO:0000023: maltose metabolic process | 1.02E-04 |
| 16 | GO:0006419: alanyl-tRNA aminoacylation | 1.02E-04 |
| 17 | GO:0044208: 'de novo' AMP biosynthetic process | 2.40E-04 |
| 18 | GO:0009629: response to gravity | 2.40E-04 |
| 19 | GO:0019388: galactose catabolic process | 2.40E-04 |
| 20 | GO:0007154: cell communication | 2.40E-04 |
| 21 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 2.40E-04 |
| 22 | GO:0001682: tRNA 5'-leader removal | 2.40E-04 |
| 23 | GO:0034470: ncRNA processing | 2.40E-04 |
| 24 | GO:0010198: synergid death | 2.40E-04 |
| 25 | GO:0071732: cellular response to nitric oxide | 2.67E-04 |
| 26 | GO:0090351: seedling development | 2.67E-04 |
| 27 | GO:0009793: embryo development ending in seed dormancy | 3.38E-04 |
| 28 | GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition | 3.99E-04 |
| 29 | GO:0015940: pantothenate biosynthetic process | 3.99E-04 |
| 30 | GO:0005977: glycogen metabolic process | 3.99E-04 |
| 31 | GO:0071369: cellular response to ethylene stimulus | 4.81E-04 |
| 32 | GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity | 5.73E-04 |
| 33 | GO:0006164: purine nucleotide biosynthetic process | 5.73E-04 |
| 34 | GO:0009590: detection of gravity | 5.73E-04 |
| 35 | GO:0043572: plastid fission | 5.73E-04 |
| 36 | GO:0009152: purine ribonucleotide biosynthetic process | 5.73E-04 |
| 37 | GO:0010239: chloroplast mRNA processing | 5.73E-04 |
| 38 | GO:0019252: starch biosynthetic process | 7.51E-04 |
| 39 | GO:0071483: cellular response to blue light | 7.62E-04 |
| 40 | GO:0044205: 'de novo' UMP biosynthetic process | 7.62E-04 |
| 41 | GO:0010021: amylopectin biosynthetic process | 7.62E-04 |
| 42 | GO:0051781: positive regulation of cell division | 7.62E-04 |
| 43 | GO:0071281: cellular response to iron ion | 9.07E-04 |
| 44 | GO:0046907: intracellular transport | 9.62E-04 |
| 45 | GO:0032543: mitochondrial translation | 9.62E-04 |
| 46 | GO:0045038: protein import into chloroplast thylakoid membrane | 9.62E-04 |
| 47 | GO:0009107: lipoate biosynthetic process | 9.62E-04 |
| 48 | GO:1901259: chloroplast rRNA processing | 1.40E-03 |
| 49 | GO:0017148: negative regulation of translation | 1.40E-03 |
| 50 | GO:0030488: tRNA methylation | 1.40E-03 |
| 51 | GO:0019509: L-methionine salvage from methylthioadenosine | 1.40E-03 |
| 52 | GO:0006614: SRP-dependent cotranslational protein targeting to membrane | 1.65E-03 |
| 53 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 1.65E-03 |
| 54 | GO:0006400: tRNA modification | 1.65E-03 |
| 55 | GO:0009658: chloroplast organization | 1.88E-03 |
| 56 | GO:0005978: glycogen biosynthetic process | 1.90E-03 |
| 57 | GO:0006353: DNA-templated transcription, termination | 1.90E-03 |
| 58 | GO:0017004: cytochrome complex assembly | 2.17E-03 |
| 59 | GO:0009932: cell tip growth | 2.17E-03 |
| 60 | GO:0071482: cellular response to light stimulus | 2.17E-03 |
| 61 | GO:0006098: pentose-phosphate shunt | 2.45E-03 |
| 62 | GO:0009821: alkaloid biosynthetic process | 2.45E-03 |
| 63 | GO:1900865: chloroplast RNA modification | 2.74E-03 |
| 64 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.74E-03 |
| 65 | GO:0006782: protoporphyrinogen IX biosynthetic process | 3.05E-03 |
| 66 | GO:0006949: syncytium formation | 3.05E-03 |
| 67 | GO:0009089: lysine biosynthetic process via diaminopimelate | 3.36E-03 |
| 68 | GO:0009073: aromatic amino acid family biosynthetic process | 3.36E-03 |
| 69 | GO:0006352: DNA-templated transcription, initiation | 3.36E-03 |
| 70 | GO:0018119: peptidyl-cysteine S-nitrosylation | 3.36E-03 |
| 71 | GO:0005983: starch catabolic process | 3.69E-03 |
| 72 | GO:0006006: glucose metabolic process | 4.02E-03 |
| 73 | GO:0006094: gluconeogenesis | 4.02E-03 |
| 74 | GO:0010020: chloroplast fission | 4.37E-03 |
| 75 | GO:0009266: response to temperature stimulus | 4.37E-03 |
| 76 | GO:0009116: nucleoside metabolic process | 5.46E-03 |
| 77 | GO:0006418: tRNA aminoacylation for protein translation | 5.85E-03 |
| 78 | GO:0048511: rhythmic process | 6.24E-03 |
| 79 | GO:0061077: chaperone-mediated protein folding | 6.24E-03 |
| 80 | GO:0035428: hexose transmembrane transport | 6.64E-03 |
| 81 | GO:0006730: one-carbon metabolic process | 6.64E-03 |
| 82 | GO:0009814: defense response, incompatible interaction | 6.64E-03 |
| 83 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 7.06E-03 |
| 84 | GO:0009409: response to cold | 7.77E-03 |
| 85 | GO:0051028: mRNA transport | 7.91E-03 |
| 86 | GO:0008033: tRNA processing | 8.35E-03 |
| 87 | GO:0046323: glucose import | 8.80E-03 |
| 88 | GO:0005975: carbohydrate metabolic process | 9.24E-03 |
| 89 | GO:0042752: regulation of circadian rhythm | 9.26E-03 |
| 90 | GO:0045893: positive regulation of transcription, DNA-templated | 9.99E-03 |
| 91 | GO:0009828: plant-type cell wall loosening | 1.17E-02 |
| 92 | GO:0071805: potassium ion transmembrane transport | 1.22E-02 |
| 93 | GO:0001666: response to hypoxia | 1.32E-02 |
| 94 | GO:0010027: thylakoid membrane organization | 1.32E-02 |
| 95 | GO:0009627: systemic acquired resistance | 1.43E-02 |
| 96 | GO:0015995: chlorophyll biosynthetic process | 1.48E-02 |
| 97 | GO:0045087: innate immune response | 1.89E-02 |
| 98 | GO:0009853: photorespiration | 1.89E-02 |
| 99 | GO:0006397: mRNA processing | 2.32E-02 |
| 100 | GO:0009664: plant-type cell wall organization | 2.66E-02 |
| 101 | GO:0006364: rRNA processing | 2.80E-02 |
| 102 | GO:0006813: potassium ion transport | 2.80E-02 |
| 103 | GO:0006096: glycolytic process | 3.15E-02 |
| 104 | GO:0048316: seed development | 3.22E-02 |
| 105 | GO:0009624: response to nematode | 3.59E-02 |
| 106 | GO:0009058: biosynthetic process | 4.38E-02 |
| 107 | GO:0009790: embryo development | 4.70E-02 |
| 108 | GO:0006633: fatty acid biosynthetic process | 4.95E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0005363: maltose transmembrane transporter activity | 0.00E+00 |
| 2 | GO:0004643: phosphoribosylaminoimidazolecarboxamide formyltransferase activity | 0.00E+00 |
| 3 | GO:0004561: alpha-N-acetylglucosaminidase activity | 0.00E+00 |
| 4 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 5 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 6 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 7 | GO:0004823: leucine-tRNA ligase activity | 0.00E+00 |
| 8 | GO:0015267: channel activity | 0.00E+00 |
| 9 | GO:0033819: lipoyl(octanoyl) transferase activity | 0.00E+00 |
| 10 | GO:0005048: signal sequence binding | 0.00E+00 |
| 11 | GO:0004019: adenylosuccinate synthase activity | 0.00E+00 |
| 12 | GO:0003937: IMP cyclohydrolase activity | 0.00E+00 |
| 13 | GO:0008237: metallopeptidase activity | 6.72E-05 |
| 14 | GO:0004813: alanine-tRNA ligase activity | 1.02E-04 |
| 15 | GO:0004645: phosphorylase activity | 1.02E-04 |
| 16 | GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity | 1.02E-04 |
| 17 | GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity | 1.02E-04 |
| 18 | GO:0008184: glycogen phosphorylase activity | 1.02E-04 |
| 19 | GO:0005525: GTP binding | 1.50E-04 |
| 20 | GO:0004614: phosphoglucomutase activity | 2.40E-04 |
| 21 | GO:0019156: isoamylase activity | 2.40E-04 |
| 22 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 2.40E-04 |
| 23 | GO:0017118: lipoyltransferase activity | 2.40E-04 |
| 24 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 2.40E-04 |
| 25 | GO:0016415: octanoyltransferase activity | 2.40E-04 |
| 26 | GO:0005528: FK506 binding | 3.32E-04 |
| 27 | GO:0002161: aminoacyl-tRNA editing activity | 3.99E-04 |
| 28 | GO:0070402: NADPH binding | 3.99E-04 |
| 29 | GO:0004176: ATP-dependent peptidase activity | 4.03E-04 |
| 30 | GO:0043023: ribosomal large subunit binding | 5.73E-04 |
| 31 | GO:0016987: sigma factor activity | 7.62E-04 |
| 32 | GO:0001053: plastid sigma factor activity | 7.62E-04 |
| 33 | GO:0004045: aminoacyl-tRNA hydrolase activity | 7.62E-04 |
| 34 | GO:0045300: acyl-[acyl-carrier-protein] desaturase activity | 9.62E-04 |
| 35 | GO:0004556: alpha-amylase activity | 1.17E-03 |
| 36 | GO:0004332: fructose-bisphosphate aldolase activity | 1.17E-03 |
| 37 | GO:0004526: ribonuclease P activity | 1.17E-03 |
| 38 | GO:0004222: metalloendopeptidase activity | 1.62E-03 |
| 39 | GO:0000287: magnesium ion binding | 1.84E-03 |
| 40 | GO:0005337: nucleoside transmembrane transporter activity | 1.90E-03 |
| 41 | GO:0008312: 7S RNA binding | 1.90E-03 |
| 42 | GO:0016844: strictosidine synthase activity | 2.74E-03 |
| 43 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 2.77E-03 |
| 44 | GO:0000049: tRNA binding | 3.69E-03 |
| 45 | GO:0003924: GTPase activity | 4.05E-03 |
| 46 | GO:0008266: poly(U) RNA binding | 4.37E-03 |
| 47 | GO:0051536: iron-sulfur cluster binding | 5.46E-03 |
| 48 | GO:0015079: potassium ion transmembrane transporter activity | 5.85E-03 |
| 49 | GO:0030170: pyridoxal phosphate binding | 6.28E-03 |
| 50 | GO:0016887: ATPase activity | 7.05E-03 |
| 51 | GO:0030570: pectate lyase activity | 7.06E-03 |
| 52 | GO:0022891: substrate-specific transmembrane transporter activity | 7.06E-03 |
| 53 | GO:0004812: aminoacyl-tRNA ligase activity | 7.91E-03 |
| 54 | GO:0005355: glucose transmembrane transporter activity | 9.26E-03 |
| 55 | GO:0016853: isomerase activity | 9.26E-03 |
| 56 | GO:0008483: transaminase activity | 1.22E-02 |
| 57 | GO:0016597: amino acid binding | 1.27E-02 |
| 58 | GO:0030145: manganese ion binding | 1.77E-02 |
| 59 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 1.89E-02 |
| 60 | GO:0003746: translation elongation factor activity | 1.89E-02 |
| 61 | GO:0043621: protein self-association | 2.39E-02 |
| 62 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.80E-02 |
| 63 | GO:0045735: nutrient reservoir activity | 3.15E-02 |
| 64 | GO:0008026: ATP-dependent helicase activity | 3.75E-02 |
| 65 | GO:0003723: RNA binding | 3.91E-02 |
| 66 | GO:0019843: rRNA binding | 4.22E-02 |
| 67 | GO:0016829: lyase activity | 4.46E-02 |
| 68 | GO:0015144: carbohydrate transmembrane transporter activity | 4.79E-02 |