Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G37100

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0002184: cytoplasmic translational termination0.00E+00
2GO:0017038: protein import0.00E+00
3GO:0070681: glutaminyl-tRNAGln biosynthesis via transamidation0.00E+00
4GO:0090279: regulation of calcium ion import0.00E+00
5GO:0090470: shoot organ boundary specification0.00E+00
6GO:0042820: vitamin B6 catabolic process0.00E+00
7GO:0006428: isoleucyl-tRNA aminoacylation0.00E+00
8GO:0042407: cristae formation0.00E+00
9GO:0042821: pyridoxal biosynthetic process0.00E+00
10GO:0015882: L-ascorbic acid transport0.00E+00
11GO:0071474: cellular hyperosmotic response0.00E+00
12GO:0018023: peptidyl-lysine trimethylation0.00E+00
13GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
14GO:0070125: mitochondrial translational elongation0.00E+00
15GO:0015995: chlorophyll biosynthetic process1.20E-13
16GO:0010027: thylakoid membrane organization4.85E-06
17GO:0032544: plastid translation1.60E-05
18GO:0010206: photosystem II repair2.21E-05
19GO:0006783: heme biosynthetic process2.21E-05
20GO:0006782: protoporphyrinogen IX biosynthetic process3.84E-05
21GO:0015979: photosynthesis6.61E-05
22GO:0010207: photosystem II assembly9.00E-05
23GO:0045038: protein import into chloroplast thylakoid membrane1.16E-04
24GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway1.68E-04
25GO:1901259: chloroplast rRNA processing2.28E-04
26GO:0009443: pyridoxal 5'-phosphate salvage3.44E-04
27GO:0009090: homoserine biosynthetic process3.44E-04
28GO:1902478: negative regulation of defense response to bacterium, incompatible interaction3.44E-04
29GO:0031426: polycistronic mRNA processing3.44E-04
30GO:0015671: oxygen transport3.44E-04
31GO:1904966: positive regulation of vitamin E biosynthetic process3.44E-04
32GO:0000481: maturation of 5S rRNA3.44E-04
33GO:1904964: positive regulation of phytol biosynthetic process3.44E-04
34GO:0043686: co-translational protein modification3.44E-04
35GO:1902458: positive regulation of stomatal opening3.44E-04
36GO:0010028: xanthophyll cycle3.44E-04
37GO:0034337: RNA folding3.44E-04
38GO:2000070: regulation of response to water deprivation3.72E-04
39GO:0071482: cellular response to light stimulus4.56E-04
40GO:0006779: porphyrin-containing compound biosynthetic process6.45E-04
41GO:1902326: positive regulation of chlorophyll biosynthetic process7.51E-04
42GO:0006432: phenylalanyl-tRNA aminoacylation7.51E-04
43GO:0018026: peptidyl-lysine monomethylation7.51E-04
44GO:0006423: cysteinyl-tRNA aminoacylation7.51E-04
45GO:0006435: threonyl-tRNA aminoacylation7.51E-04
46GO:1903426: regulation of reactive oxygen species biosynthetic process7.51E-04
47GO:0015804: neutral amino acid transport7.51E-04
48GO:0051262: protein tetramerization7.51E-04
49GO:0009658: chloroplast organization8.64E-04
50GO:0006352: DNA-templated transcription, initiation8.68E-04
51GO:0016024: CDP-diacylglycerol biosynthetic process9.90E-04
52GO:0000913: preprophase band assembly1.21E-03
53GO:0033591: response to L-ascorbic acid1.21E-03
54GO:0031022: nuclear migration along microfilament1.21E-03
55GO:0034051: negative regulation of plant-type hypersensitive response1.21E-03
56GO:0080055: low-affinity nitrate transport1.21E-03
57GO:0051604: protein maturation1.21E-03
58GO:0015940: pantothenate biosynthetic process1.21E-03
59GO:0045493: xylan catabolic process1.21E-03
60GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.21E-03
61GO:0009735: response to cytokinin1.62E-03
62GO:0055114: oxidation-reduction process1.63E-03
63GO:0006633: fatty acid biosynthetic process1.72E-03
64GO:1901000: regulation of response to salt stress1.75E-03
65GO:0010601: positive regulation of auxin biosynthetic process1.75E-03
66GO:0010239: chloroplast mRNA processing1.75E-03
67GO:0033014: tetrapyrrole biosynthetic process1.75E-03
68GO:0006424: glutamyl-tRNA aminoacylation1.75E-03
69GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.75E-03
70GO:2001141: regulation of RNA biosynthetic process1.75E-03
71GO:0009067: aspartate family amino acid biosynthetic process1.75E-03
72GO:0010371: regulation of gibberellin biosynthetic process1.75E-03
73GO:0006020: inositol metabolic process1.75E-03
74GO:0009102: biotin biosynthetic process1.75E-03
75GO:0007017: microtubule-based process1.92E-03
76GO:0010073: meristem maintenance1.92E-03
77GO:0048511: rhythmic process2.11E-03
78GO:0009765: photosynthesis, light harvesting2.35E-03
79GO:0006021: inositol biosynthetic process2.35E-03
80GO:0071483: cellular response to blue light2.35E-03
81GO:0010109: regulation of photosynthesis2.35E-03
82GO:0006397: mRNA processing2.69E-03
83GO:0000304: response to singlet oxygen3.00E-03
84GO:0032543: mitochondrial translation3.00E-03
85GO:0006564: L-serine biosynthetic process3.00E-03
86GO:0009904: chloroplast accumulation movement3.00E-03
87GO:0016120: carotene biosynthetic process3.00E-03
88GO:0010236: plastoquinone biosynthetic process3.00E-03
89GO:0031365: N-terminal protein amino acid modification3.00E-03
90GO:0016123: xanthophyll biosynthetic process3.00E-03
91GO:0000470: maturation of LSU-rRNA3.71E-03
92GO:0006655: phosphatidylglycerol biosynthetic process3.71E-03
93GO:0048831: regulation of shoot system development3.71E-03
94GO:0010190: cytochrome b6f complex assembly3.71E-03
95GO:0006014: D-ribose metabolic process3.71E-03
96GO:0046855: inositol phosphate dephosphorylation3.71E-03
97GO:0007018: microtubule-based movement3.71E-03
98GO:0010304: PSII associated light-harvesting complex II catabolic process3.71E-03
99GO:0006508: proteolysis4.44E-03
100GO:0009955: adaxial/abaxial pattern specification4.47E-03
101GO:0009903: chloroplast avoidance movement4.47E-03
102GO:0030488: tRNA methylation4.47E-03
103GO:0009854: oxidative photosynthetic carbon pathway4.47E-03
104GO:0009088: threonine biosynthetic process4.47E-03
105GO:0016032: viral process4.55E-03
106GO:0030163: protein catabolic process4.85E-03
107GO:0048437: floral organ development5.27E-03
108GO:0006614: SRP-dependent cotranslational protein targeting to membrane5.27E-03
109GO:0048564: photosystem I assembly6.13E-03
110GO:0006605: protein targeting6.13E-03
111GO:0032508: DNA duplex unwinding6.13E-03
112GO:0016559: peroxisome fission6.13E-03
113GO:0046686: response to cadmium ion6.59E-03
114GO:0022900: electron transport chain7.03E-03
115GO:0015996: chlorophyll catabolic process7.03E-03
116GO:0007186: G-protein coupled receptor signaling pathway7.03E-03
117GO:0017004: cytochrome complex assembly7.03E-03
118GO:0098656: anion transmembrane transport7.97E-03
119GO:0009821: alkaloid biosynthetic process7.97E-03
120GO:0019432: triglyceride biosynthetic process7.97E-03
121GO:0048507: meristem development7.97E-03
122GO:0018298: protein-chromophore linkage8.05E-03
123GO:0010205: photoinhibition8.96E-03
124GO:0043067: regulation of programmed cell death8.96E-03
125GO:0009086: methionine biosynthetic process8.96E-03
126GO:1900865: chloroplast RNA modification8.96E-03
127GO:0031425: chloroplast RNA processing8.96E-03
128GO:0007568: aging9.32E-03
129GO:0006535: cysteine biosynthetic process from serine1.00E-02
130GO:0045087: innate immune response1.02E-02
131GO:0010228: vegetative to reproductive phase transition of meristem1.02E-02
132GO:0009089: lysine biosynthetic process via diaminopimelate1.11E-02
133GO:0072593: reactive oxygen species metabolic process1.11E-02
134GO:0009773: photosynthetic electron transport in photosystem I1.11E-02
135GO:0008285: negative regulation of cell proliferation1.11E-02
136GO:0000272: polysaccharide catabolic process1.11E-02
137GO:0006415: translational termination1.11E-02
138GO:0009684: indoleacetic acid biosynthetic process1.11E-02
139GO:0008380: RNA splicing1.21E-02
140GO:0006790: sulfur compound metabolic process1.22E-02
141GO:0006631: fatty acid metabolic process1.22E-02
142GO:0045037: protein import into chloroplast stroma1.22E-02
143GO:0015031: protein transport1.24E-02
144GO:0009718: anthocyanin-containing compound biosynthetic process1.33E-02
145GO:0010143: cutin biosynthetic process1.45E-02
146GO:0010020: chloroplast fission1.45E-02
147GO:0009266: response to temperature stimulus1.45E-02
148GO:0019853: L-ascorbic acid biosynthetic process1.58E-02
149GO:0090351: seedling development1.58E-02
150GO:0046854: phosphatidylinositol phosphorylation1.58E-02
151GO:0006412: translation1.66E-02
152GO:0006636: unsaturated fatty acid biosynthetic process1.70E-02
153GO:0006289: nucleotide-excision repair1.83E-02
154GO:0019344: cysteine biosynthetic process1.83E-02
155GO:0008299: isoprenoid biosynthetic process1.96E-02
156GO:0006418: tRNA aminoacylation for protein translation1.96E-02
157GO:0061077: chaperone-mediated protein folding2.10E-02
158GO:0031408: oxylipin biosynthetic process2.10E-02
159GO:0016114: terpenoid biosynthetic process2.10E-02
160GO:0003333: amino acid transmembrane transport2.10E-02
161GO:0010431: seed maturation2.10E-02
162GO:0016226: iron-sulfur cluster assembly2.24E-02
163GO:0035428: hexose transmembrane transport2.24E-02
164GO:0080092: regulation of pollen tube growth2.24E-02
165GO:0019748: secondary metabolic process2.24E-02
166GO:0009416: response to light stimulus2.30E-02
167GO:0010227: floral organ abscission2.38E-02
168GO:0006012: galactose metabolic process2.38E-02
169GO:0016117: carotenoid biosynthetic process2.68E-02
170GO:0051028: mRNA transport2.68E-02
171GO:0010197: polar nucleus fusion2.99E-02
172GO:0010182: sugar mediated signaling pathway2.99E-02
173GO:0046323: glucose import2.99E-02
174GO:0009741: response to brassinosteroid2.99E-02
175GO:0042752: regulation of circadian rhythm3.15E-02
176GO:0009646: response to absence of light3.15E-02
177GO:0009791: post-embryonic development3.31E-02
178GO:0010183: pollen tube guidance3.31E-02
179GO:0019252: starch biosynthetic process3.31E-02
180GO:0009556: microsporogenesis3.31E-02
181GO:0006457: protein folding3.37E-02
182GO:0006629: lipid metabolic process3.58E-02
183GO:0010090: trichome morphogenesis3.81E-02
184GO:0009793: embryo development ending in seed dormancy3.82E-02
185GO:0006413: translational initiation4.09E-02
186GO:0000910: cytokinesis4.33E-02
187GO:0009451: RNA modification4.48E-02
188GO:0016126: sterol biosynthetic process4.51E-02
RankGO TermAdjusted P value
1GO:0061634: alpha-D-xyloside xylohydrolase0.00E+00
2GO:0010349: L-galactose dehydrogenase activity0.00E+00
3GO:0043864: indoleacetamide hydrolase activity0.00E+00
4GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
5GO:0008887: glycerate kinase activity0.00E+00
6GO:0016631: enoyl-[acyl-carrier-protein] reductase activity0.00E+00
7GO:0050515: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity0.00E+00
8GO:0050613: delta14-sterol reductase activity0.00E+00
9GO:0080176: xyloglucan 1,6-alpha-xylosidase activity0.00E+00
10GO:0015229: L-ascorbic acid transporter activity0.00E+00
11GO:0045435: lycopene epsilon cyclase activity0.00E+00
12GO:0004822: isoleucine-tRNA ligase activity0.00E+00
13GO:0004853: uroporphyrinogen decarboxylase activity0.00E+00
14GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
15GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity0.00E+00
16GO:0036033: mediator complex binding0.00E+00
17GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity0.00E+00
18GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
19GO:0005048: signal sequence binding0.00E+00
20GO:0004076: biotin synthase activity0.00E+00
21GO:0016851: magnesium chelatase activity3.23E-10
22GO:0070402: NADPH binding1.89E-05
23GO:0016987: sigma factor activity7.42E-05
24GO:0001053: plastid sigma factor activity7.42E-05
25GO:0005525: GTP binding1.22E-04
26GO:0004366: glycerol-3-phosphate O-acyltransferase activity1.68E-04
27GO:0004801: sedoheptulose-7-phosphate:D-glyceraldehyde-3-phosphate glyceronetransferase activity3.44E-04
28GO:0005227: calcium activated cation channel activity3.44E-04
29GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.44E-04
30GO:0004856: xylulokinase activity3.44E-04
31GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.44E-04
32GO:0004325: ferrochelatase activity3.44E-04
33GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.44E-04
34GO:0042586: peptide deformylase activity3.44E-04
35GO:0016784: 3-mercaptopyruvate sulfurtransferase activity3.44E-04
36GO:0005344: oxygen transporter activity3.44E-04
37GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.44E-04
38GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity3.44E-04
39GO:0004033: aldo-keto reductase (NADP) activity3.72E-04
40GO:0003924: GTPase activity6.22E-04
41GO:0052832: inositol monophosphate 3-phosphatase activity7.51E-04
42GO:0004817: cysteine-tRNA ligase activity7.51E-04
43GO:0016630: protochlorophyllide reductase activity7.51E-04
44GO:0004829: threonine-tRNA ligase activity7.51E-04
45GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity7.51E-04
46GO:0008934: inositol monophosphate 1-phosphatase activity7.51E-04
47GO:0052833: inositol monophosphate 4-phosphatase activity7.51E-04
48GO:0004826: phenylalanine-tRNA ligase activity7.51E-04
49GO:0004412: homoserine dehydrogenase activity7.51E-04
50GO:0015172: acidic amino acid transmembrane transporter activity7.51E-04
51GO:0050017: L-3-cyanoalanine synthase activity7.51E-04
52GO:0042389: omega-3 fatty acid desaturase activity7.51E-04
53GO:0004617: phosphoglycerate dehydrogenase activity7.51E-04
54GO:0000049: tRNA binding9.90E-04
55GO:0008236: serine-type peptidase activity1.06E-03
56GO:0031072: heat shock protein binding1.12E-03
57GO:0015462: ATPase-coupled protein transmembrane transporter activity1.21E-03
58GO:0005504: fatty acid binding1.21E-03
59GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.21E-03
60GO:0003913: DNA photolyase activity1.21E-03
61GO:0002161: aminoacyl-tRNA editing activity1.21E-03
62GO:0004148: dihydrolipoyl dehydrogenase activity1.21E-03
63GO:0080054: low-affinity nitrate transmembrane transporter activity1.21E-03
64GO:0008266: poly(U) RNA binding1.26E-03
65GO:0016887: ATPase activity1.48E-03
66GO:0004072: aspartate kinase activity1.75E-03
67GO:0015175: neutral amino acid transmembrane transporter activity1.75E-03
68GO:0048027: mRNA 5'-UTR binding1.75E-03
69GO:0004792: thiosulfate sulfurtransferase activity1.75E-03
70GO:0016149: translation release factor activity, codon specific1.75E-03
71GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.75E-03
72GO:0043023: ribosomal large subunit binding1.75E-03
73GO:0004045: aminoacyl-tRNA hydrolase activity2.35E-03
74GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds2.35E-03
75GO:0070628: proteasome binding2.35E-03
76GO:0045430: chalcone isomerase activity2.35E-03
77GO:0009044: xylan 1,4-beta-xylosidase activity2.35E-03
78GO:0043495: protein anchor2.35E-03
79GO:0046556: alpha-L-arabinofuranosidase activity2.35E-03
80GO:0016279: protein-lysine N-methyltransferase activity2.35E-03
81GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.55E-03
82GO:0003959: NADPH dehydrogenase activity3.00E-03
83GO:0016773: phosphotransferase activity, alcohol group as acceptor3.00E-03
84GO:0004040: amidase activity3.00E-03
85GO:0031593: polyubiquitin binding3.71E-03
86GO:0004629: phospholipase C activity3.71E-03
87GO:0102229: amylopectin maltohydrolase activity3.71E-03
88GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity3.71E-03
89GO:0005524: ATP binding4.06E-03
90GO:0003723: RNA binding4.27E-03
91GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity4.47E-03
92GO:0004435: phosphatidylinositol phospholipase C activity4.47E-03
93GO:0004747: ribokinase activity4.47E-03
94GO:0016161: beta-amylase activity4.47E-03
95GO:0004723: calcium-dependent protein serine/threonine phosphatase activity4.47E-03
96GO:0005261: cation channel activity4.47E-03
97GO:0009927: histidine phosphotransfer kinase activity4.47E-03
98GO:0004124: cysteine synthase activity4.47E-03
99GO:0009881: photoreceptor activity5.27E-03
100GO:0019899: enzyme binding5.27E-03
101GO:0005200: structural constituent of cytoskeleton5.49E-03
102GO:0016597: amino acid binding5.82E-03
103GO:0003729: mRNA binding5.98E-03
104GO:0008312: 7S RNA binding6.13E-03
105GO:0043022: ribosome binding6.13E-03
106GO:0008865: fructokinase activity6.13E-03
107GO:0019843: rRNA binding6.39E-03
108GO:0008173: RNA methyltransferase activity7.03E-03
109GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water7.03E-03
110GO:0003747: translation release factor activity7.97E-03
111GO:0004222: metalloendopeptidase activity8.89E-03
112GO:0004743: pyruvate kinase activity8.96E-03
113GO:0030955: potassium ion binding8.96E-03
114GO:0016844: strictosidine synthase activity8.96E-03
115GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity8.96E-03
116GO:0008017: microtubule binding1.02E-02
117GO:0003746: translation elongation factor activity1.02E-02
118GO:0005089: Rho guanyl-nucleotide exchange factor activity1.11E-02
119GO:0008559: xenobiotic-transporting ATPase activity1.11E-02
120GO:0047372: acylglycerol lipase activity1.11E-02
121GO:0004185: serine-type carboxypeptidase activity1.32E-02
122GO:0016491: oxidoreductase activity1.33E-02
123GO:0005315: inorganic phosphate transmembrane transporter activity1.33E-02
124GO:0051537: 2 iron, 2 sulfur cluster binding1.43E-02
125GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.45E-02
126GO:0003899: DNA-directed 5'-3' RNA polymerase activity1.79E-02
127GO:0043130: ubiquitin binding1.83E-02
128GO:0005528: FK506 binding1.83E-02
129GO:0051536: iron-sulfur cluster binding1.83E-02
130GO:0051087: chaperone binding1.96E-02
131GO:0003777: microtubule motor activity1.98E-02
132GO:0004176: ATP-dependent peptidase activity2.10E-02
133GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups2.18E-02
134GO:0030570: pectate lyase activity2.38E-02
135GO:0022891: substrate-specific transmembrane transporter activity2.38E-02
136GO:0003756: protein disulfide isomerase activity2.53E-02
137GO:0008514: organic anion transmembrane transporter activity2.53E-02
138GO:0051082: unfolded protein binding2.55E-02
139GO:0004812: aminoacyl-tRNA ligase activity2.68E-02
140GO:0003735: structural constituent of ribosome2.90E-02
141GO:0008080: N-acetyltransferase activity2.99E-02
142GO:0016740: transferase activity3.09E-02
143GO:0005355: glucose transmembrane transporter activity3.15E-02
144GO:0016853: isomerase activity3.15E-02
145GO:0048038: quinone binding3.47E-02
146GO:0004252: serine-type endopeptidase activity3.54E-02
147GO:0030170: pyridoxal phosphate binding3.54E-02
148GO:0015144: carbohydrate transmembrane transporter activity3.81E-02
149GO:0005507: copper ion binding3.86E-02
150GO:0003684: damaged DNA binding3.98E-02
151GO:0016791: phosphatase activity3.98E-02
152GO:0008483: transaminase activity4.15E-02
153GO:0008237: metallopeptidase activity4.15E-02
154GO:0005351: sugar:proton symporter activity4.29E-02
155GO:0016168: chlorophyll binding4.69E-02
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Gene type



Gene DE type