GO Enrichment Analysis of Co-expressed Genes with
AT4G35850
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0002949: tRNA threonylcarbamoyladenosine modification | 0.00E+00 |
| 2 | GO:0090627: plant epidermal cell differentiation | 0.00E+00 |
| 3 | GO:0009606: tropism | 0.00E+00 |
| 4 | GO:0000372: Group I intron splicing | 0.00E+00 |
| 5 | GO:0080127: fruit septum development | 0.00E+00 |
| 6 | GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 7 | GO:1900864: mitochondrial RNA modification | 3.86E-06 |
| 8 | GO:2000038: regulation of stomatal complex development | 3.86E-06 |
| 9 | GO:0007389: pattern specification process | 3.35E-05 |
| 10 | GO:0034757: negative regulation of iron ion transport | 6.10E-05 |
| 11 | GO:2000123: positive regulation of stomatal complex development | 1.48E-04 |
| 12 | GO:0010271: regulation of chlorophyll catabolic process | 1.48E-04 |
| 13 | GO:0080117: secondary growth | 2.51E-04 |
| 14 | GO:0010589: leaf proximal/distal pattern formation | 2.51E-04 |
| 15 | GO:0009432: SOS response | 2.51E-04 |
| 16 | GO:0043481: anthocyanin accumulation in tissues in response to UV light | 3.65E-04 |
| 17 | GO:0000730: DNA recombinase assembly | 3.65E-04 |
| 18 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 4.88E-04 |
| 19 | GO:0006479: protein methylation | 4.88E-04 |
| 20 | GO:0010252: auxin homeostasis | 4.99E-04 |
| 21 | GO:0032876: negative regulation of DNA endoreduplication | 6.19E-04 |
| 22 | GO:0030308: negative regulation of cell growth | 6.19E-04 |
| 23 | GO:0010375: stomatal complex patterning | 6.19E-04 |
| 24 | GO:0009616: virus induced gene silencing | 6.19E-04 |
| 25 | GO:0009959: negative gravitropism | 7.57E-04 |
| 26 | GO:0010315: auxin efflux | 7.57E-04 |
| 27 | GO:0009913: epidermal cell differentiation | 7.57E-04 |
| 28 | GO:0048831: regulation of shoot system development | 7.57E-04 |
| 29 | GO:0003006: developmental process involved in reproduction | 7.57E-04 |
| 30 | GO:0048509: regulation of meristem development | 9.01E-04 |
| 31 | GO:2000037: regulation of stomatal complex patterning | 9.01E-04 |
| 32 | GO:0042148: strand invasion | 1.05E-03 |
| 33 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 1.05E-03 |
| 34 | GO:0048766: root hair initiation | 1.21E-03 |
| 35 | GO:0009926: auxin polar transport | 1.22E-03 |
| 36 | GO:0009827: plant-type cell wall modification | 1.38E-03 |
| 37 | GO:0010212: response to ionizing radiation | 1.38E-03 |
| 38 | GO:0001510: RNA methylation | 1.38E-03 |
| 39 | GO:0009657: plastid organization | 1.38E-03 |
| 40 | GO:0010093: specification of floral organ identity | 1.38E-03 |
| 41 | GO:0009245: lipid A biosynthetic process | 1.55E-03 |
| 42 | GO:0048507: meristem development | 1.55E-03 |
| 43 | GO:0000373: Group II intron splicing | 1.55E-03 |
| 44 | GO:1900865: chloroplast RNA modification | 1.73E-03 |
| 45 | GO:0048364: root development | 1.78E-03 |
| 46 | GO:0009909: regulation of flower development | 1.79E-03 |
| 47 | GO:0030422: production of siRNA involved in RNA interference | 1.92E-03 |
| 48 | GO:0048765: root hair cell differentiation | 2.12E-03 |
| 49 | GO:0008361: regulation of cell size | 2.32E-03 |
| 50 | GO:0006312: mitotic recombination | 2.32E-03 |
| 51 | GO:0010582: floral meristem determinacy | 2.32E-03 |
| 52 | GO:0009734: auxin-activated signaling pathway | 2.60E-03 |
| 53 | GO:0048467: gynoecium development | 2.74E-03 |
| 54 | GO:0010020: chloroplast fission | 2.74E-03 |
| 55 | GO:0006270: DNA replication initiation | 2.74E-03 |
| 56 | GO:0009416: response to light stimulus | 3.48E-03 |
| 57 | GO:0040008: regulation of growth | 3.76E-03 |
| 58 | GO:0071215: cellular response to abscisic acid stimulus | 4.40E-03 |
| 59 | GO:0010082: regulation of root meristem growth | 4.40E-03 |
| 60 | GO:0006284: base-excision repair | 4.65E-03 |
| 61 | GO:0070417: cellular response to cold | 4.92E-03 |
| 62 | GO:0042631: cellular response to water deprivation | 5.19E-03 |
| 63 | GO:0042335: cuticle development | 5.19E-03 |
| 64 | GO:0010087: phloem or xylem histogenesis | 5.19E-03 |
| 65 | GO:0010305: leaf vascular tissue pattern formation | 5.46E-03 |
| 66 | GO:0009958: positive gravitropism | 5.46E-03 |
| 67 | GO:0048825: cotyledon development | 6.03E-03 |
| 68 | GO:0080156: mitochondrial mRNA modification | 6.32E-03 |
| 69 | GO:0006970: response to osmotic stress | 6.53E-03 |
| 70 | GO:0009630: gravitropism | 6.61E-03 |
| 71 | GO:0010090: trichome morphogenesis | 6.91E-03 |
| 72 | GO:0009639: response to red or far red light | 7.21E-03 |
| 73 | GO:0006310: DNA recombination | 7.21E-03 |
| 74 | GO:0007267: cell-cell signaling | 7.52E-03 |
| 75 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 7.78E-03 |
| 76 | GO:0009414: response to water deprivation | 8.26E-03 |
| 77 | GO:0010029: regulation of seed germination | 8.48E-03 |
| 78 | GO:0006974: cellular response to DNA damage stimulus | 8.81E-03 |
| 79 | GO:0048767: root hair elongation | 1.02E-02 |
| 80 | GO:0000160: phosphorelay signal transduction system | 1.02E-02 |
| 81 | GO:0006281: DNA repair | 1.11E-02 |
| 82 | GO:0006397: mRNA processing | 1.16E-02 |
| 83 | GO:0009636: response to toxic substance | 1.51E-02 |
| 84 | GO:0006260: DNA replication | 1.59E-02 |
| 85 | GO:0009736: cytokinin-activated signaling pathway | 1.71E-02 |
| 86 | GO:0016569: covalent chromatin modification | 2.11E-02 |
| 87 | GO:0006396: RNA processing | 2.25E-02 |
| 88 | GO:0045893: positive regulation of transcription, DNA-templated | 2.27E-02 |
| 89 | GO:0055085: transmembrane transport | 2.51E-02 |
| 90 | GO:0006457: protein folding | 2.56E-02 |
| 91 | GO:0016310: phosphorylation | 2.65E-02 |
| 92 | GO:0009058: biosynthetic process | 2.68E-02 |
| 93 | GO:0009845: seed germination | 2.73E-02 |
| 94 | GO:0009790: embryo development | 2.88E-02 |
| 95 | GO:0006633: fatty acid biosynthetic process | 3.04E-02 |
| 96 | GO:0009651: response to salt stress | 3.90E-02 |
| 97 | GO:0009658: chloroplast organization | 4.43E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 2 | GO:0061711: N(6)-L-threonylcarbamoyladenine synthase | 0.00E+00 |
| 3 | GO:0009672: auxin:proton symporter activity | 5.14E-05 |
| 4 | GO:0004016: adenylate cyclase activity | 6.10E-05 |
| 5 | GO:0016274: protein-arginine N-methyltransferase activity | 6.10E-05 |
| 6 | GO:0003697: single-stranded DNA binding | 6.10E-05 |
| 7 | GO:0010329: auxin efflux transmembrane transporter activity | 9.94E-05 |
| 8 | GO:0009884: cytokinin receptor activity | 1.48E-04 |
| 9 | GO:0005034: osmosensor activity | 2.51E-04 |
| 10 | GO:0008725: DNA-3-methyladenine glycosylase activity | 6.19E-04 |
| 11 | GO:0003688: DNA replication origin binding | 7.57E-04 |
| 12 | GO:0031177: phosphopantetheine binding | 7.57E-04 |
| 13 | GO:0000035: acyl binding | 9.01E-04 |
| 14 | GO:0019900: kinase binding | 9.01E-04 |
| 15 | GO:0000150: recombinase activity | 1.05E-03 |
| 16 | GO:0000400: four-way junction DNA binding | 1.21E-03 |
| 17 | GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process | 1.21E-03 |
| 18 | GO:0004520: endodeoxyribonuclease activity | 1.21E-03 |
| 19 | GO:0008173: RNA methyltransferase activity | 1.38E-03 |
| 20 | GO:0003690: double-stranded DNA binding | 1.68E-03 |
| 21 | GO:0004673: protein histidine kinase activity | 1.92E-03 |
| 22 | GO:0008171: O-methyltransferase activity | 1.92E-03 |
| 23 | GO:0003725: double-stranded RNA binding | 2.52E-03 |
| 24 | GO:0031072: heat shock protein binding | 2.52E-03 |
| 25 | GO:0000155: phosphorelay sensor kinase activity | 2.52E-03 |
| 26 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 3.25E-03 |
| 27 | GO:0003723: RNA binding | 3.61E-03 |
| 28 | GO:0043424: protein histidine kinase binding | 3.65E-03 |
| 29 | GO:0008094: DNA-dependent ATPase activity | 3.89E-03 |
| 30 | GO:0043565: sequence-specific DNA binding | 5.75E-03 |
| 31 | GO:0008168: methyltransferase activity | 5.84E-03 |
| 32 | GO:0019901: protein kinase binding | 6.03E-03 |
| 33 | GO:0004871: signal transducer activity | 9.43E-03 |
| 34 | GO:0004222: metalloendopeptidase activity | 1.05E-02 |
| 35 | GO:0043621: protein self-association | 1.47E-02 |
| 36 | GO:0008289: lipid binding | 1.55E-02 |
| 37 | GO:0016298: lipase activity | 1.76E-02 |
| 38 | GO:0004650: polygalacturonase activity | 2.06E-02 |
| 39 | GO:0016874: ligase activity | 2.11E-02 |
| 40 | GO:0003779: actin binding | 2.15E-02 |
| 41 | GO:0051082: unfolded protein binding | 2.20E-02 |
| 42 | GO:0016829: lyase activity | 2.73E-02 |
| 43 | GO:0042802: identical protein binding | 3.85E-02 |
| 44 | GO:0003677: DNA binding | 3.97E-02 |
| 45 | GO:0005215: transporter activity | 4.41E-02 |
| 46 | GO:0016788: hydrolase activity, acting on ester bonds | 4.49E-02 |