GO Enrichment Analysis of Co-expressed Genes with
AT4G35250
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0046471: phosphatidylglycerol metabolic process | 0.00E+00 |
| 2 | GO:0050732: negative regulation of peptidyl-tyrosine phosphorylation | 0.00E+00 |
| 3 | GO:1901918: negative regulation of exoribonuclease activity | 0.00E+00 |
| 4 | GO:0009645: response to low light intensity stimulus | 1.81E-07 |
| 5 | GO:0015979: photosynthesis | 1.47E-06 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 1.65E-06 |
| 7 | GO:0010600: regulation of auxin biosynthetic process | 5.79E-06 |
| 8 | GO:0009768: photosynthesis, light harvesting in photosystem I | 6.41E-06 |
| 9 | GO:0010189: vitamin E biosynthetic process | 2.12E-05 |
| 10 | GO:0010244: response to low fluence blue light stimulus by blue low-fluence system | 2.12E-05 |
| 11 | GO:0009704: de-etiolation | 3.81E-05 |
| 12 | GO:0010928: regulation of auxin mediated signaling pathway | 3.81E-05 |
| 13 | GO:0018298: protein-chromophore linkage | 6.84E-05 |
| 14 | GO:0010426: DNA methylation on cytosine within a CHH sequence | 7.75E-05 |
| 15 | GO:0071277: cellular response to calcium ion | 7.75E-05 |
| 16 | GO:0048640: negative regulation of developmental growth | 7.75E-05 |
| 17 | GO:0071461: cellular response to redox state | 7.75E-05 |
| 18 | GO:0009773: photosynthetic electron transport in photosystem I | 1.04E-04 |
| 19 | GO:0009644: response to high light intensity | 1.58E-04 |
| 20 | GO:0080005: photosystem stoichiometry adjustment | 1.85E-04 |
| 21 | GO:0006729: tetrahydrobiopterin biosynthetic process | 1.85E-04 |
| 22 | GO:0030388: fructose 1,6-bisphosphate metabolic process | 1.85E-04 |
| 23 | GO:0006000: fructose metabolic process | 3.11E-04 |
| 24 | GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis | 4.49E-04 |
| 25 | GO:2001141: regulation of RNA biosynthetic process | 4.49E-04 |
| 26 | GO:0009765: photosynthesis, light harvesting | 5.98E-04 |
| 27 | GO:0015994: chlorophyll metabolic process | 5.98E-04 |
| 28 | GO:0009107: lipoate biosynthetic process | 7.57E-04 |
| 29 | GO:0042549: photosystem II stabilization | 9.24E-04 |
| 30 | GO:0045926: negative regulation of growth | 1.10E-03 |
| 31 | GO:0050829: defense response to Gram-negative bacterium | 1.29E-03 |
| 32 | GO:1900057: positive regulation of leaf senescence | 1.29E-03 |
| 33 | GO:0010161: red light signaling pathway | 1.29E-03 |
| 34 | GO:0010114: response to red light | 1.65E-03 |
| 35 | GO:0009657: plastid organization | 1.69E-03 |
| 36 | GO:0032544: plastid translation | 1.69E-03 |
| 37 | GO:0006002: fructose 6-phosphate metabolic process | 1.69E-03 |
| 38 | GO:0071482: cellular response to light stimulus | 1.69E-03 |
| 39 | GO:0090333: regulation of stomatal closure | 1.91E-03 |
| 40 | GO:0006783: heme biosynthetic process | 1.91E-03 |
| 41 | GO:0006754: ATP biosynthetic process | 1.91E-03 |
| 42 | GO:0042761: very long-chain fatty acid biosynthetic process | 2.14E-03 |
| 43 | GO:0006779: porphyrin-containing compound biosynthetic process | 2.14E-03 |
| 44 | GO:0009585: red, far-red light phototransduction | 2.21E-03 |
| 45 | GO:0043069: negative regulation of programmed cell death | 2.37E-03 |
| 46 | GO:0006782: protoporphyrinogen IX biosynthetic process | 2.37E-03 |
| 47 | GO:0032259: methylation | 2.38E-03 |
| 48 | GO:0006352: DNA-templated transcription, initiation | 2.61E-03 |
| 49 | GO:0009725: response to hormone | 3.12E-03 |
| 50 | GO:0006094: gluconeogenesis | 3.12E-03 |
| 51 | GO:0009767: photosynthetic electron transport chain | 3.12E-03 |
| 52 | GO:0005986: sucrose biosynthetic process | 3.12E-03 |
| 53 | GO:0019253: reductive pentose-phosphate cycle | 3.38E-03 |
| 54 | GO:0010207: photosystem II assembly | 3.38E-03 |
| 55 | GO:0034605: cellular response to heat | 3.38E-03 |
| 56 | GO:0006636: unsaturated fatty acid biosynthetic process | 3.94E-03 |
| 57 | GO:0009409: response to cold | 4.38E-03 |
| 58 | GO:0051302: regulation of cell division | 4.52E-03 |
| 59 | GO:0006306: DNA methylation | 4.82E-03 |
| 60 | GO:0006633: fatty acid biosynthetic process | 4.89E-03 |
| 61 | GO:0030433: ubiquitin-dependent ERAD pathway | 5.13E-03 |
| 62 | GO:0010017: red or far-red light signaling pathway | 5.13E-03 |
| 63 | GO:0009416: response to light stimulus | 5.19E-03 |
| 64 | GO:0009693: ethylene biosynthetic process | 5.45E-03 |
| 65 | GO:0019722: calcium-mediated signaling | 5.77E-03 |
| 66 | GO:0009561: megagametogenesis | 5.77E-03 |
| 67 | GO:0009306: protein secretion | 5.77E-03 |
| 68 | GO:0006606: protein import into nucleus | 6.44E-03 |
| 69 | GO:0055114: oxidation-reduction process | 6.47E-03 |
| 70 | GO:0009741: response to brassinosteroid | 6.78E-03 |
| 71 | GO:0006814: sodium ion transport | 7.13E-03 |
| 72 | GO:0019252: starch biosynthetic process | 7.49E-03 |
| 73 | GO:0010583: response to cyclopentenone | 8.22E-03 |
| 74 | GO:0009658: chloroplast organization | 8.30E-03 |
| 75 | GO:0042254: ribosome biogenesis | 8.46E-03 |
| 76 | GO:0030163: protein catabolic process | 8.59E-03 |
| 77 | GO:0007267: cell-cell signaling | 9.36E-03 |
| 78 | GO:0010027: thylakoid membrane organization | 1.02E-02 |
| 79 | GO:0009788: negative regulation of abscisic acid-activated signaling pathway | 1.06E-02 |
| 80 | GO:0042128: nitrate assimilation | 1.10E-02 |
| 81 | GO:0010411: xyloglucan metabolic process | 1.14E-02 |
| 82 | GO:0010218: response to far red light | 1.31E-02 |
| 83 | GO:0016051: carbohydrate biosynthetic process | 1.45E-02 |
| 84 | GO:0009637: response to blue light | 1.45E-02 |
| 85 | GO:0006631: fatty acid metabolic process | 1.64E-02 |
| 86 | GO:0009744: response to sucrose | 1.73E-02 |
| 87 | GO:0042546: cell wall biogenesis | 1.78E-02 |
| 88 | GO:0000209: protein polyubiquitination | 1.78E-02 |
| 89 | GO:0006810: transport | 2.07E-02 |
| 90 | GO:0006417: regulation of translation | 2.30E-02 |
| 91 | GO:0043086: negative regulation of catalytic activity | 2.41E-02 |
| 92 | GO:0016569: covalent chromatin modification | 2.64E-02 |
| 93 | GO:0042545: cell wall modification | 2.69E-02 |
| 94 | GO:0009624: response to nematode | 2.75E-02 |
| 95 | GO:0006396: RNA processing | 2.81E-02 |
| 96 | GO:0009742: brassinosteroid mediated signaling pathway | 2.87E-02 |
| 97 | GO:0010150: leaf senescence | 4.06E-02 |
| 98 | GO:0045490: pectin catabolic process | 4.06E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors | 0.00E+00 |
| 2 | GO:0045550: geranylgeranyl reductase activity | 0.00E+00 |
| 3 | GO:0050278: sedoheptulose-bisphosphatase activity | 0.00E+00 |
| 4 | GO:0102345: 3-hydroxy-lignoceroyl-CoA dehydratase activity | 0.00E+00 |
| 5 | GO:0008942: nitrite reductase [NAD(P)H] activity | 0.00E+00 |
| 6 | GO:0050342: tocopherol O-methyltransferase activity | 0.00E+00 |
| 7 | GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity | 0.00E+00 |
| 8 | GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity | 0.00E+00 |
| 9 | GO:0030504: inorganic diphosphate transmembrane transporter activity | 0.00E+00 |
| 10 | GO:0046406: magnesium protoporphyrin IX methyltransferase activity | 0.00E+00 |
| 11 | GO:0102344: 3-hydroxy-behenoyl-CoA dehydratase activity | 0.00E+00 |
| 12 | GO:0031409: pigment binding | 4.46E-06 |
| 13 | GO:0016168: chlorophyll binding | 4.94E-05 |
| 14 | GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | 7.75E-05 |
| 15 | GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity | 7.75E-05 |
| 16 | GO:0080132: fatty acid alpha-hydroxylase activity | 7.75E-05 |
| 17 | GO:0080023: 3R-hydroxyacyl-CoA dehydratase activity | 7.75E-05 |
| 18 | GO:0031072: heat shock protein binding | 1.40E-04 |
| 19 | GO:0018708: thiol S-methyltransferase activity | 1.85E-04 |
| 20 | GO:0008883: glutamyl-tRNA reductase activity | 1.85E-04 |
| 21 | GO:0047746: chlorophyllase activity | 1.85E-04 |
| 22 | GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity | 1.85E-04 |
| 23 | GO:0010277: chlorophyllide a oxygenase [overall] activity | 3.11E-04 |
| 24 | GO:0016992: lipoate synthase activity | 3.11E-04 |
| 25 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 4.49E-04 |
| 26 | GO:0001053: plastid sigma factor activity | 5.98E-04 |
| 27 | GO:0016987: sigma factor activity | 5.98E-04 |
| 28 | GO:0042578: phosphoric ester hydrolase activity | 9.24E-04 |
| 29 | GO:0016491: oxidoreductase activity | 9.40E-04 |
| 30 | GO:0003886: DNA (cytosine-5-)-methyltransferase activity | 1.10E-03 |
| 31 | GO:0051537: 2 iron, 2 sulfur cluster binding | 1.78E-03 |
| 32 | GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism | 1.91E-03 |
| 33 | GO:0030234: enzyme regulator activity | 2.37E-03 |
| 34 | GO:0005315: inorganic phosphate transmembrane transporter activity | 3.12E-03 |
| 35 | GO:0051082: unfolded protein binding | 3.12E-03 |
| 36 | GO:0004725: protein tyrosine phosphatase activity | 3.94E-03 |
| 37 | GO:0008565: protein transporter activity | 4.66E-03 |
| 38 | GO:0046910: pectinesterase inhibitor activity | 5.01E-03 |
| 39 | GO:0003727: single-stranded RNA binding | 5.77E-03 |
| 40 | GO:0008514: organic anion transmembrane transporter activity | 5.77E-03 |
| 41 | GO:0008080: N-acetyltransferase activity | 6.78E-03 |
| 42 | GO:0042802: identical protein binding | 6.82E-03 |
| 43 | GO:0004872: receptor activity | 7.49E-03 |
| 44 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 7.85E-03 |
| 45 | GO:0048038: quinone binding | 7.85E-03 |
| 46 | GO:0005515: protein binding | 8.51E-03 |
| 47 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 1.14E-02 |
| 48 | GO:0050661: NADP binding | 1.59E-02 |
| 49 | GO:0043621: protein self-association | 1.83E-02 |
| 50 | GO:0015293: symporter activity | 1.88E-02 |
| 51 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.14E-02 |
| 52 | GO:0003690: double-stranded DNA binding | 2.19E-02 |
| 53 | GO:0031625: ubiquitin protein ligase binding | 2.30E-02 |
| 54 | GO:0045330: aspartyl esterase activity | 2.30E-02 |
| 55 | GO:0030599: pectinesterase activity | 2.64E-02 |
| 56 | GO:0003735: structural constituent of ribosome | 3.02E-02 |
| 57 | GO:0019843: rRNA binding | 3.23E-02 |
| 58 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 3.29E-02 |
| 59 | GO:0030170: pyridoxal phosphate binding | 3.48E-02 |
| 60 | GO:0004252: serine-type endopeptidase activity | 3.48E-02 |
| 61 | GO:0015144: carbohydrate transmembrane transporter activity | 3.67E-02 |
| 62 | GO:0005351: sugar:proton symporter activity | 3.99E-02 |