GO Enrichment Analysis of Co-expressed Genes with
AT4G35230
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0006511: ubiquitin-dependent protein catabolic process | 1.10E-06 |
| 2 | GO:0046283: anthocyanin-containing compound metabolic process | 6.50E-06 |
| 3 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 6.50E-06 |
| 4 | GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly | 1.00E-05 |
| 5 | GO:0006772: thiamine metabolic process | 6.10E-05 |
| 6 | GO:0010540: basipetal auxin transport | 1.14E-04 |
| 7 | GO:0051258: protein polymerization | 1.48E-04 |
| 8 | GO:0015865: purine nucleotide transport | 1.48E-04 |
| 9 | GO:0018345: protein palmitoylation | 1.48E-04 |
| 10 | GO:2000072: regulation of defense response to fungus, incompatible interaction | 1.48E-04 |
| 11 | GO:0030433: ubiquitin-dependent ERAD pathway | 2.21E-04 |
| 12 | GO:0010498: proteasomal protein catabolic process | 2.51E-04 |
| 13 | GO:0055074: calcium ion homeostasis | 2.51E-04 |
| 14 | GO:0018342: protein prenylation | 2.51E-04 |
| 15 | GO:0009963: positive regulation of flavonoid biosynthetic process | 3.65E-04 |
| 16 | GO:0010255: glucose mediated signaling pathway | 3.65E-04 |
| 17 | GO:0046902: regulation of mitochondrial membrane permeability | 3.65E-04 |
| 18 | GO:0030163: protein catabolic process | 4.70E-04 |
| 19 | GO:0009823: cytokinin catabolic process | 6.19E-04 |
| 20 | GO:0009229: thiamine diphosphate biosynthetic process | 6.19E-04 |
| 21 | GO:0042176: regulation of protein catabolic process | 7.57E-04 |
| 22 | GO:0045040: protein import into mitochondrial outer membrane | 7.57E-04 |
| 23 | GO:0006694: steroid biosynthetic process | 9.01E-04 |
| 24 | GO:0071333: cellular response to glucose stimulus | 9.01E-04 |
| 25 | GO:0007186: G-protein coupled receptor signaling pathway | 1.38E-03 |
| 26 | GO:0048574: long-day photoperiodism, flowering | 1.38E-03 |
| 27 | GO:0010204: defense response signaling pathway, resistance gene-independent | 1.38E-03 |
| 28 | GO:0046685: response to arsenic-containing substance | 1.55E-03 |
| 29 | GO:0043085: positive regulation of catalytic activity | 2.12E-03 |
| 30 | GO:0010223: secondary shoot formation | 2.74E-03 |
| 31 | GO:0009934: regulation of meristem structural organization | 2.74E-03 |
| 32 | GO:0048768: root hair cell tip growth | 2.74E-03 |
| 33 | GO:0000162: tryptophan biosynthetic process | 3.18E-03 |
| 34 | GO:0010187: negative regulation of seed germination | 3.42E-03 |
| 35 | GO:0080147: root hair cell development | 3.42E-03 |
| 36 | GO:0015992: proton transport | 3.89E-03 |
| 37 | GO:0009625: response to insect | 4.40E-03 |
| 38 | GO:0016117: carotenoid biosynthetic process | 4.92E-03 |
| 39 | GO:0006885: regulation of pH | 5.46E-03 |
| 40 | GO:0006662: glycerol ether metabolic process | 5.46E-03 |
| 41 | GO:0006623: protein targeting to vacuole | 6.03E-03 |
| 42 | GO:1901657: glycosyl compound metabolic process | 6.91E-03 |
| 43 | GO:0010252: auxin homeostasis | 7.21E-03 |
| 44 | GO:0006914: autophagy | 7.21E-03 |
| 45 | GO:0016126: sterol biosynthetic process | 8.16E-03 |
| 46 | GO:0044550: secondary metabolite biosynthetic process | 8.18E-03 |
| 47 | GO:0045454: cell redox homeostasis | 9.00E-03 |
| 48 | GO:0010411: xyloglucan metabolic process | 9.14E-03 |
| 49 | GO:0016311: dephosphorylation | 9.47E-03 |
| 50 | GO:0048767: root hair elongation | 1.02E-02 |
| 51 | GO:0009407: toxin catabolic process | 1.05E-02 |
| 52 | GO:0048527: lateral root development | 1.09E-02 |
| 53 | GO:0009867: jasmonic acid mediated signaling pathway | 1.16E-02 |
| 54 | GO:0045087: innate immune response | 1.16E-02 |
| 55 | GO:0034599: cellular response to oxidative stress | 1.20E-02 |
| 56 | GO:0006839: mitochondrial transport | 1.27E-02 |
| 57 | GO:0006887: exocytosis | 1.31E-02 |
| 58 | GO:0009926: auxin polar transport | 1.39E-02 |
| 59 | GO:0042546: cell wall biogenesis | 1.43E-02 |
| 60 | GO:0009636: response to toxic substance | 1.51E-02 |
| 61 | GO:0009734: auxin-activated signaling pathway | 1.57E-02 |
| 62 | GO:0000165: MAPK cascade | 1.59E-02 |
| 63 | GO:0006812: cation transport | 1.63E-02 |
| 64 | GO:0009809: lignin biosynthetic process | 1.71E-02 |
| 65 | GO:0009585: red, far-red light phototransduction | 1.71E-02 |
| 66 | GO:0006813: potassium ion transport | 1.71E-02 |
| 67 | GO:0051603: proteolysis involved in cellular protein catabolic process | 1.76E-02 |
| 68 | GO:0009555: pollen development | 1.98E-02 |
| 69 | GO:0055114: oxidation-reduction process | 1.99E-02 |
| 70 | GO:0009626: plant-type hypersensitive response | 2.02E-02 |
| 71 | GO:0009553: embryo sac development | 2.15E-02 |
| 72 | GO:0006396: RNA processing | 2.25E-02 |
| 73 | GO:0009793: embryo development ending in seed dormancy | 2.46E-02 |
| 74 | GO:0055085: transmembrane transport | 2.51E-02 |
| 75 | GO:0009845: seed germination | 2.73E-02 |
| 76 | GO:0009451: RNA modification | 3.30E-02 |
| 77 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.52E-02 |
| 78 | GO:0006470: protein dephosphorylation | 3.57E-02 |
| 79 | GO:0007166: cell surface receptor signaling pathway | 3.57E-02 |
| 80 | GO:0009617: response to bacterium | 3.68E-02 |
| 81 | GO:0071555: cell wall organization | 4.00E-02 |
| 82 | GO:0045944: positive regulation of transcription from RNA polymerase II promoter | 4.20E-02 |
| 83 | GO:0009733: response to auxin | 4.48E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0052684: L-serine hydro-lyase (adding indole, L-tryptophan-forming) activity | 0.00E+00 |
| 2 | GO:0004298: threonine-type endopeptidase activity | 4.52E-08 |
| 3 | GO:0036402: proteasome-activating ATPase activity | 1.00E-05 |
| 4 | GO:0004788: thiamine diphosphokinase activity | 6.10E-05 |
| 5 | GO:0008233: peptidase activity | 1.20E-04 |
| 6 | GO:0017025: TBP-class protein binding | 1.30E-04 |
| 7 | GO:0047012: sterol-4-alpha-carboxylate 3-dehydrogenase (decarboxylating) activity | 1.48E-04 |
| 8 | GO:0004540: ribonuclease activity | 2.01E-04 |
| 9 | GO:0003854: 3-beta-hydroxy-delta5-steroid dehydrogenase activity | 2.51E-04 |
| 10 | GO:0004557: alpha-galactosidase activity | 2.51E-04 |
| 11 | GO:0052692: raffinose alpha-galactosidase activity | 2.51E-04 |
| 12 | GO:0004324: ferredoxin-NADP+ reductase activity | 2.51E-04 |
| 13 | GO:0010279: indole-3-acetic acid amido synthetase activity | 4.88E-04 |
| 14 | GO:0004834: tryptophan synthase activity | 4.88E-04 |
| 15 | GO:0005471: ATP:ADP antiporter activity | 6.19E-04 |
| 16 | GO:0019139: cytokinin dehydrogenase activity | 6.19E-04 |
| 17 | GO:0031593: polyubiquitin binding | 7.57E-04 |
| 18 | GO:0030234: enzyme regulator activity | 1.92E-03 |
| 19 | GO:0008047: enzyme activator activity | 1.92E-03 |
| 20 | GO:0008794: arsenate reductase (glutaredoxin) activity | 2.12E-03 |
| 21 | GO:0008327: methyl-CpG binding | 2.12E-03 |
| 22 | GO:0045551: cinnamyl-alcohol dehydrogenase activity | 2.32E-03 |
| 23 | GO:0015035: protein disulfide oxidoreductase activity | 2.36E-03 |
| 24 | GO:0004022: alcohol dehydrogenase (NAD) activity | 2.52E-03 |
| 25 | GO:0008131: primary amine oxidase activity | 2.74E-03 |
| 26 | GO:0004535: poly(A)-specific ribonuclease activity | 2.74E-03 |
| 27 | GO:0004725: protein tyrosine phosphatase activity | 3.18E-03 |
| 28 | GO:0043130: ubiquitin binding | 3.42E-03 |
| 29 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 3.89E-03 |
| 30 | GO:0047134: protein-disulfide reductase activity | 4.92E-03 |
| 31 | GO:0005451: monovalent cation:proton antiporter activity | 5.19E-03 |
| 32 | GO:0005507: copper ion binding | 5.45E-03 |
| 33 | GO:0019825: oxygen binding | 5.45E-03 |
| 34 | GO:0015299: solute:proton antiporter activity | 5.74E-03 |
| 35 | GO:0004791: thioredoxin-disulfide reductase activity | 5.74E-03 |
| 36 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 6.32E-03 |
| 37 | GO:0015385: sodium:proton antiporter activity | 6.91E-03 |
| 38 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 6.91E-03 |
| 39 | GO:0016791: phosphatase activity | 7.21E-03 |
| 40 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 9.14E-03 |
| 41 | GO:0102483: scopolin beta-glucosidase activity | 9.14E-03 |
| 42 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 9.73E-03 |
| 43 | GO:0005096: GTPase activator activity | 1.02E-02 |
| 44 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.09E-02 |
| 45 | GO:0050897: cobalt ion binding | 1.09E-02 |
| 46 | GO:0008422: beta-glucosidase activity | 1.23E-02 |
| 47 | GO:0004364: glutathione transferase activity | 1.35E-02 |
| 48 | GO:0005198: structural molecule activity | 1.51E-02 |
| 49 | GO:0016887: ATPase activity | 1.73E-02 |
| 50 | GO:0016874: ligase activity | 2.11E-02 |
| 51 | GO:0003779: actin binding | 2.15E-02 |
| 52 | GO:0051082: unfolded protein binding | 2.20E-02 |
| 53 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.61E-02 |
| 54 | GO:0030170: pyridoxal phosphate binding | 2.78E-02 |
| 55 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 2.83E-02 |
| 56 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.09E-02 |
| 57 | GO:0043531: ADP binding | 4.73E-02 |
| 58 | GO:0050660: flavin adenine dinucleotide binding | 4.91E-02 |