Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G34390

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0098755: maintenance of seed dormancy by absisic acid0.00E+00
2GO:1900367: positive regulation of defense response to insect0.00E+00
3GO:0006983: ER overload response0.00E+00
4GO:0010324: membrane invagination0.00E+00
5GO:0032499: detection of peptidoglycan0.00E+00
6GO:0006182: cGMP biosynthetic process0.00E+00
7GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
8GO:0071327: cellular response to trehalose stimulus0.00E+00
9GO:0006468: protein phosphorylation5.19E-11
10GO:0060548: negative regulation of cell death1.27E-06
11GO:0009626: plant-type hypersensitive response2.40E-06
12GO:0035556: intracellular signal transduction3.29E-06
13GO:0019725: cellular homeostasis8.98E-06
14GO:0031348: negative regulation of defense response2.60E-05
15GO:0010112: regulation of systemic acquired resistance4.19E-05
16GO:0015696: ammonium transport6.67E-05
17GO:0000187: activation of MAPK activity6.67E-05
18GO:0072488: ammonium transmembrane transport1.17E-04
19GO:0080142: regulation of salicylic acid biosynthetic process1.17E-04
20GO:0010200: response to chitin1.50E-04
21GO:0046777: protein autophosphorylation1.63E-04
22GO:0034052: positive regulation of plant-type hypersensitive response1.80E-04
23GO:0010225: response to UV-C1.80E-04
24GO:0007166: cell surface receptor signaling pathway2.14E-04
25GO:0018105: peptidyl-serine phosphorylation3.17E-04
26GO:2000037: regulation of stomatal complex patterning3.43E-04
27GO:0019567: arabinose biosynthetic process4.51E-04
28GO:0015969: guanosine tetraphosphate metabolic process4.51E-04
29GO:0009609: response to symbiotic bacterium4.51E-04
30GO:0010421: hydrogen peroxide-mediated programmed cell death4.51E-04
31GO:0051180: vitamin transport4.51E-04
32GO:0010482: regulation of epidermal cell division4.51E-04
33GO:0015031: protein transport4.51E-04
34GO:0030974: thiamine pyrophosphate transport4.51E-04
35GO:1901183: positive regulation of camalexin biosynthetic process4.51E-04
36GO:0009270: response to humidity4.51E-04
37GO:0006643: membrane lipid metabolic process4.51E-04
38GO:0032469: endoplasmic reticulum calcium ion homeostasis4.51E-04
39GO:1902065: response to L-glutamate4.51E-04
40GO:0032491: detection of molecule of fungal origin4.51E-04
41GO:0010365: positive regulation of ethylene biosynthetic process4.51E-04
42GO:0042350: GDP-L-fucose biosynthetic process4.51E-04
43GO:2000031: regulation of salicylic acid mediated signaling pathway6.72E-04
44GO:0044419: interspecies interaction between organisms9.73E-04
45GO:0000719: photoreactive repair9.73E-04
46GO:0031349: positive regulation of defense response9.73E-04
47GO:0043066: negative regulation of apoptotic process9.73E-04
48GO:0015893: drug transport9.73E-04
49GO:0051258: protein polymerization9.73E-04
50GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.73E-04
51GO:0002221: pattern recognition receptor signaling pathway9.73E-04
52GO:0080151: positive regulation of salicylic acid mediated signaling pathway9.73E-04
53GO:0080185: effector dependent induction by symbiont of host immune response9.73E-04
54GO:0010618: aerenchyma formation9.73E-04
55GO:0080181: lateral root branching9.73E-04
56GO:0006952: defense response1.02E-03
57GO:0006470: protein dephosphorylation1.03E-03
58GO:0001666: response to hypoxia1.33E-03
59GO:0009751: response to salicylic acid1.34E-03
60GO:0009816: defense response to bacterium, incompatible interaction1.43E-03
61GO:0012501: programmed cell death1.45E-03
62GO:0015695: organic cation transport1.58E-03
63GO:0006048: UDP-N-acetylglucosamine biosynthetic process1.58E-03
64GO:0034051: negative regulation of plant-type hypersensitive response1.58E-03
65GO:1900140: regulation of seedling development1.58E-03
66GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.58E-03
67GO:0045793: positive regulation of cell size1.58E-03
68GO:0010186: positive regulation of cellular defense response1.58E-03
69GO:0010229: inflorescence development1.65E-03
70GO:0018107: peptidyl-threonine phosphorylation1.65E-03
71GO:0009266: response to temperature stimulus1.86E-03
72GO:0042742: defense response to bacterium2.10E-03
73GO:0043207: response to external biotic stimulus2.29E-03
74GO:0072334: UDP-galactose transmembrane transport2.29E-03
75GO:0015749: monosaccharide transport2.29E-03
76GO:0030100: regulation of endocytosis2.29E-03
77GO:0072583: clathrin-dependent endocytosis2.29E-03
78GO:0009226: nucleotide-sugar biosynthetic process2.29E-03
79GO:0048530: fruit morphogenesis2.29E-03
80GO:0002679: respiratory burst involved in defense response2.29E-03
81GO:0071323: cellular response to chitin2.29E-03
82GO:0010116: positive regulation of abscisic acid biosynthetic process2.29E-03
83GO:0046713: borate transport2.29E-03
84GO:0045087: innate immune response2.52E-03
85GO:0016192: vesicle-mediated transport2.80E-03
86GO:0033358: UDP-L-arabinose biosynthetic process3.08E-03
87GO:0022622: root system development3.08E-03
88GO:0071219: cellular response to molecule of bacterial origin3.08E-03
89GO:0051567: histone H3-K9 methylation3.08E-03
90GO:2000038: regulation of stomatal complex development3.08E-03
91GO:0045227: capsule polysaccharide biosynthetic process3.08E-03
92GO:0009814: defense response, incompatible interaction3.44E-03
93GO:2000022: regulation of jasmonic acid mediated signaling pathway3.44E-03
94GO:0071456: cellular response to hypoxia3.44E-03
95GO:0051707: response to other organism3.49E-03
96GO:0010150: leaf senescence3.68E-03
97GO:0006886: intracellular protein transport3.71E-03
98GO:0010227: floral organ abscission3.75E-03
99GO:0009697: salicylic acid biosynthetic process3.95E-03
100GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process4.45E-03
101GO:0000165: MAPK cascade4.45E-03
102GO:0007165: signal transduction4.67E-03
103GO:0009617: response to bacterium4.82E-03
104GO:0033365: protein localization to organelle4.89E-03
105GO:0009117: nucleotide metabolic process4.89E-03
106GO:0006574: valine catabolic process4.89E-03
107GO:0006014: D-ribose metabolic process4.89E-03
108GO:0010942: positive regulation of cell death4.89E-03
109GO:0009737: response to abscisic acid4.94E-03
110GO:0009094: L-phenylalanine biosynthetic process5.90E-03
111GO:0031930: mitochondria-nucleus signaling pathway5.90E-03
112GO:0010199: organ boundary specification between lateral organs and the meristem5.90E-03
113GO:0010310: regulation of hydrogen peroxide metabolic process5.90E-03
114GO:1902074: response to salt6.98E-03
115GO:0010044: response to aluminum ion6.98E-03
116GO:0009610: response to symbiotic fungus6.98E-03
117GO:0046470: phosphatidylcholine metabolic process6.98E-03
118GO:0043090: amino acid import6.98E-03
119GO:0071446: cellular response to salicylic acid stimulus6.98E-03
120GO:0009620: response to fungus7.14E-03
121GO:0035265: organ growth8.12E-03
122GO:0009787: regulation of abscisic acid-activated signaling pathway8.12E-03
123GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline8.12E-03
124GO:0009819: drought recovery8.12E-03
125GO:0030162: regulation of proteolysis8.12E-03
126GO:1900150: regulation of defense response to fungus8.12E-03
127GO:0006904: vesicle docking involved in exocytosis8.22E-03
128GO:0009742: brassinosteroid mediated signaling pathway8.64E-03
129GO:0080167: response to karrikin9.95E-03
130GO:0009627: systemic acquired resistance1.03E-02
131GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway1.05E-02
132GO:0006098: pentose-phosphate shunt1.06E-02
133GO:0051865: protein autoubiquitination1.06E-02
134GO:0080144: amino acid homeostasis1.06E-02
135GO:0046916: cellular transition metal ion homeostasis1.06E-02
136GO:0009056: catabolic process1.06E-02
137GO:0046685: response to arsenic-containing substance1.06E-02
138GO:0016049: cell growth1.15E-02
139GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway1.19E-02
140GO:0010449: root meristem growth1.19E-02
141GO:1900426: positive regulation of defense response to bacterium1.19E-02
142GO:0009817: defense response to fungus, incompatible interaction1.21E-02
143GO:0008219: cell death1.21E-02
144GO:0043069: negative regulation of programmed cell death1.33E-02
145GO:0006865: amino acid transport1.47E-02
146GO:0019684: photosynthesis, light reaction1.47E-02
147GO:0048229: gametophyte development1.47E-02
148GO:0048765: root hair cell differentiation1.47E-02
149GO:0000038: very long-chain fatty acid metabolic process1.47E-02
150GO:0002213: defense response to insect1.62E-02
151GO:0010105: negative regulation of ethylene-activated signaling pathway1.62E-02
152GO:0006890: retrograde vesicle-mediated transport, Golgi to ER1.62E-02
153GO:0000266: mitochondrial fission1.62E-02
154GO:0016310: phosphorylation1.71E-02
155GO:0006006: glucose metabolic process1.78E-02
156GO:0055046: microgametogenesis1.78E-02
157GO:0006897: endocytosis1.83E-02
158GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.86E-02
159GO:0007034: vacuolar transport1.94E-02
160GO:0000209: protein polyubiquitination2.07E-02
161GO:0042343: indole glucosinolate metabolic process2.10E-02
162GO:0010167: response to nitrate2.10E-02
163GO:0070588: calcium ion transmembrane transport2.10E-02
164GO:0010053: root epidermal cell differentiation2.10E-02
165GO:0009225: nucleotide-sugar metabolic process2.10E-02
166GO:0031347: regulation of defense response2.41E-02
167GO:0009863: salicylic acid mediated signaling pathway2.44E-02
168GO:0080147: root hair cell development2.44E-02
169GO:2000377: regulation of reactive oxygen species metabolic process2.44E-02
170GO:0010026: trichome differentiation2.62E-02
171GO:0051302: regulation of cell division2.62E-02
172GO:0098542: defense response to other organism2.81E-02
173GO:0010431: seed maturation2.81E-02
174GO:0006970: response to osmotic stress3.07E-02
175GO:0009411: response to UV3.18E-02
176GO:0009625: response to insect3.18E-02
177GO:0006012: galactose metabolic process3.18E-02
178GO:0009306: protein secretion3.38E-02
179GO:0006810: transport3.50E-02
180GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.58E-02
181GO:0080022: primary root development3.78E-02
182GO:0009624: response to nematode3.81E-02
183GO:0046323: glucose import3.99E-02
184GO:0009741: response to brassinosteroid3.99E-02
185GO:0009749: response to glucose4.41E-02
186GO:0019252: starch biosynthetic process4.41E-02
187GO:0006979: response to oxidative stress4.57E-02
188GO:0071554: cell wall organization or biogenesis4.63E-02
189GO:0002229: defense response to oomycetes4.63E-02
190GO:0006891: intra-Golgi vesicle-mediated transport4.63E-02
191GO:0007264: small GTPase mediated signal transduction4.85E-02
RankGO TermAdjusted P value
1GO:0004610: phosphoacetylglucosamine mutase activity0.00E+00
2GO:0050220: prostaglandin-E synthase activity0.00E+00
3GO:0005358: high-affinity hydrogen:glucose symporter activity0.00E+00
4GO:2001080: chitosan binding0.00E+00
5GO:0016301: kinase activity5.96E-10
6GO:0004674: protein serine/threonine kinase activity1.66E-08
7GO:0008320: protein transmembrane transporter activity1.85E-07
8GO:0005524: ATP binding2.71E-07
9GO:0004672: protein kinase activity2.71E-06
10GO:0008519: ammonium transmembrane transporter activity2.55E-04
11GO:0033612: receptor serine/threonine kinase binding3.35E-04
12GO:0090422: thiamine pyrophosphate transporter activity4.51E-04
13GO:0015085: calcium ion transmembrane transporter activity4.51E-04
14GO:0015398: high-affinity secondary active ammonium transmembrane transporter activity4.51E-04
15GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.51E-04
16GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.51E-04
17GO:0050577: GDP-L-fucose synthase activity4.51E-04
18GO:0009679: hexose:proton symporter activity4.51E-04
19GO:0032050: clathrin heavy chain binding4.51E-04
20GO:1901149: salicylic acid binding4.51E-04
21GO:0004708: MAP kinase kinase activity5.51E-04
22GO:0004714: transmembrane receptor protein tyrosine kinase activity5.51E-04
23GO:0004675: transmembrane receptor protein serine/threonine kinase activity7.18E-04
24GO:0015036: disulfide oxidoreductase activity9.73E-04
25GO:0008728: GTP diphosphokinase activity9.73E-04
26GO:0004385: guanylate kinase activity9.73E-04
27GO:0004713: protein tyrosine kinase activity1.10E-03
28GO:0009931: calcium-dependent protein serine/threonine kinase activity1.53E-03
29GO:0004383: guanylate cyclase activity1.58E-03
30GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.58E-03
31GO:0004683: calmodulin-dependent protein kinase activity1.63E-03
32GO:0005509: calcium ion binding1.72E-03
33GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity2.29E-03
34GO:0019199: transmembrane receptor protein kinase activity3.08E-03
35GO:0050373: UDP-arabinose 4-epimerase activity3.08E-03
36GO:0047769: arogenate dehydratase activity3.08E-03
37GO:0004664: prephenate dehydratase activity3.08E-03
38GO:0005459: UDP-galactose transmembrane transporter activity3.95E-03
39GO:0015145: monosaccharide transmembrane transporter activity3.95E-03
40GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.95E-03
41GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.95E-03
42GO:0004709: MAP kinase kinase kinase activity4.89E-03
43GO:0102391: decanoate--CoA ligase activity5.90E-03
44GO:0004747: ribokinase activity5.90E-03
45GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.90E-03
46GO:0003978: UDP-glucose 4-epimerase activity5.90E-03
47GO:0004656: procollagen-proline 4-dioxygenase activity5.90E-03
48GO:0019900: kinase binding5.90E-03
49GO:0016740: transferase activity6.39E-03
50GO:0102360: daphnetin 3-O-glucosyltransferase activity6.98E-03
51GO:0004467: long-chain fatty acid-CoA ligase activity6.98E-03
52GO:0102425: myricetin 3-O-glucosyltransferase activity6.98E-03
53GO:0047893: flavonol 3-O-glucosyltransferase activity8.12E-03
54GO:0005544: calcium-dependent phospholipid binding8.12E-03
55GO:0008865: fructokinase activity8.12E-03
56GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity8.22E-03
57GO:0043531: ADP binding8.25E-03
58GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity9.33E-03
59GO:0004630: phospholipase D activity9.33E-03
60GO:0005516: calmodulin binding9.62E-03
61GO:0008375: acetylglucosaminyltransferase activity1.03E-02
62GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.06E-02
63GO:0004806: triglyceride lipase activity1.09E-02
64GO:0008171: O-methyltransferase activity1.33E-02
65GO:0008565: protein transporter activity1.34E-02
66GO:0004871: signal transducer activity1.40E-02
67GO:0005543: phospholipid binding1.47E-02
68GO:0004722: protein serine/threonine phosphatase activity1.50E-02
69GO:0015198: oligopeptide transporter activity1.62E-02
70GO:0004712: protein serine/threonine/tyrosine kinase activity1.68E-02
71GO:0005388: calcium-transporting ATPase activity1.78E-02
72GO:0031072: heat shock protein binding1.78E-02
73GO:0005262: calcium channel activity1.78E-02
74GO:0008061: chitin binding2.10E-02
75GO:0005198: structural molecule activity2.23E-02
76GO:0004725: protein tyrosine phosphatase activity2.27E-02
77GO:0051287: NAD binding2.41E-02
78GO:0031418: L-ascorbic acid binding2.44E-02
79GO:0003954: NADH dehydrogenase activity2.44E-02
80GO:0035251: UDP-glucosyltransferase activity2.81E-02
81GO:0004707: MAP kinase activity2.81E-02
82GO:0019706: protein-cysteine S-palmitoyltransferase activity2.81E-02
83GO:0005515: protein binding2.82E-02
84GO:0015171: amino acid transmembrane transporter activity2.97E-02
85GO:0031625: ubiquitin protein ligase binding2.97E-02
86GO:0004842: ubiquitin-protein transferase activity3.13E-02
87GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.27E-02
88GO:0061630: ubiquitin protein ligase activity3.89E-02
89GO:0050662: coenzyme binding4.20E-02
90GO:0016853: isomerase activity4.20E-02
91GO:0004197: cysteine-type endopeptidase activity4.85E-02
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Gene type



Gene DE type