Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G33925

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
2GO:2001253: regulation of histone H3-K36 trimethylation0.00E+00
3GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
4GO:0046865: terpenoid transport0.00E+00
5GO:0002084: protein depalmitoylation0.00E+00
6GO:0010793: regulation of mRNA export from nucleus0.00E+00
7GO:0034756: regulation of iron ion transport0.00E+00
8GO:0051252: regulation of RNA metabolic process3.18E-06
9GO:0006517: protein deglycosylation1.15E-05
10GO:1900056: negative regulation of leaf senescence1.96E-04
11GO:0031123: RNA 3'-end processing2.63E-04
12GO:0009700: indole phytoalexin biosynthetic process2.63E-04
13GO:0010230: alternative respiration2.63E-04
14GO:0042868: antisense RNA metabolic process2.63E-04
15GO:0002143: tRNA wobble position uridine thiolation2.63E-04
16GO:0098789: pre-mRNA cleavage required for polyadenylation2.63E-04
17GO:0010120: camalexin biosynthetic process3.06E-04
18GO:0006996: organelle organization5.78E-04
19GO:0009156: ribonucleoside monophosphate biosynthetic process5.78E-04
20GO:0035335: peptidyl-tyrosine dephosphorylation5.78E-04
21GO:0015709: thiosulfate transport5.78E-04
22GO:0071422: succinate transmembrane transport5.78E-04
23GO:0050684: regulation of mRNA processing5.78E-04
24GO:0042853: L-alanine catabolic process5.78E-04
25GO:0043066: negative regulation of apoptotic process5.78E-04
26GO:0008535: respiratory chain complex IV assembly5.78E-04
27GO:0045836: positive regulation of meiotic nuclear division9.39E-04
28GO:0015783: GDP-fucose transport9.39E-04
29GO:0015692: lead ion transport9.39E-04
30GO:0060968: regulation of gene silencing9.39E-04
31GO:0080168: abscisic acid transport9.39E-04
32GO:0032784: regulation of DNA-templated transcription, elongation9.39E-04
33GO:0061158: 3'-UTR-mediated mRNA destabilization9.39E-04
34GO:0017006: protein-tetrapyrrole linkage9.39E-04
35GO:0010053: root epidermal cell differentiation9.62E-04
36GO:0006515: misfolded or incompletely synthesized protein catabolic process1.34E-03
37GO:0055089: fatty acid homeostasis1.34E-03
38GO:0015729: oxaloacetate transport1.34E-03
39GO:0009584: detection of visible light1.34E-03
40GO:0006516: glycoprotein catabolic process1.34E-03
41GO:0002679: respiratory burst involved in defense response1.34E-03
42GO:0010731: protein glutathionylation1.34E-03
43GO:0030433: ubiquitin-dependent ERAD pathway1.56E-03
44GO:0071369: cellular response to ethylene stimulus1.70E-03
45GO:0009165: nucleotide biosynthetic process1.79E-03
46GO:0010363: regulation of plant-type hypersensitive response1.79E-03
47GO:0010188: response to microbial phytotoxin1.79E-03
48GO:0000380: alternative mRNA splicing, via spliceosome2.29E-03
49GO:0045927: positive regulation of growth2.29E-03
50GO:0071423: malate transmembrane transport2.29E-03
51GO:0006544: glycine metabolic process2.29E-03
52GO:0006623: protein targeting to vacuole2.68E-03
53GO:0006561: proline biosynthetic process2.82E-03
54GO:0006563: L-serine metabolic process2.82E-03
55GO:0006777: Mo-molybdopterin cofactor biosynthetic process2.82E-03
56GO:0035435: phosphate ion transmembrane transport2.82E-03
57GO:0010193: response to ozone2.87E-03
58GO:0010189: vitamin E biosynthetic process3.40E-03
59GO:0051607: defense response to virus3.90E-03
60GO:0080186: developmental vegetative growth4.00E-03
61GO:2000014: regulation of endosperm development4.00E-03
62GO:0008272: sulfate transport4.00E-03
63GO:0009627: systemic acquired resistance4.61E-03
64GO:0050821: protein stabilization4.65E-03
65GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.65E-03
66GO:0009819: drought recovery4.65E-03
67GO:0006491: N-glycan processing4.65E-03
68GO:1900150: regulation of defense response to fungus4.65E-03
69GO:0030968: endoplasmic reticulum unfolded protein response5.32E-03
70GO:0006002: fructose 6-phosphate metabolic process5.32E-03
71GO:0009817: defense response to fungus, incompatible interaction5.39E-03
72GO:0010150: leaf senescence5.78E-03
73GO:0009407: toxin catabolic process5.95E-03
74GO:0010112: regulation of systemic acquired resistance6.03E-03
75GO:0048589: developmental growth6.03E-03
76GO:0015780: nucleotide-sugar transport6.03E-03
77GO:0008202: steroid metabolic process6.77E-03
78GO:0090332: stomatal closure6.77E-03
79GO:0035999: tetrahydrofolate interconversion6.77E-03
80GO:0048268: clathrin coat assembly6.77E-03
81GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.77E-03
82GO:0006952: defense response7.07E-03
83GO:0043069: negative regulation of programmed cell death7.54E-03
84GO:0009089: lysine biosynthetic process via diaminopimelate8.35E-03
85GO:0051707: response to other organism8.82E-03
86GO:0016925: protein sumoylation9.17E-03
87GO:0006890: retrograde vesicle-mediated transport, Golgi to ER9.17E-03
88GO:0006790: sulfur compound metabolic process9.17E-03
89GO:0000209: protein polyubiquitination9.18E-03
90GO:0009636: response to toxic substance9.92E-03
91GO:2000028: regulation of photoperiodism, flowering1.00E-02
92GO:0009718: anthocyanin-containing compound biosynthetic process1.00E-02
93GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process1.00E-02
94GO:0006626: protein targeting to mitochondrion1.00E-02
95GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.07E-02
96GO:0007034: vacuolar transport1.09E-02
97GO:0046854: phosphatidylinositol phosphorylation1.18E-02
98GO:0042343: indole glucosinolate metabolic process1.18E-02
99GO:0007030: Golgi organization1.18E-02
100GO:0010039: response to iron ion1.18E-02
101GO:0071732: cellular response to nitric oxide1.18E-02
102GO:0009809: lignin biosynthetic process1.19E-02
103GO:0006636: unsaturated fatty acid biosynthetic process1.28E-02
104GO:0006289: nucleotide-excision repair1.38E-02
105GO:0005992: trehalose biosynthetic process1.38E-02
106GO:0009116: nucleoside metabolic process1.38E-02
107GO:0009626: plant-type hypersensitive response1.50E-02
108GO:0098542: defense response to other organism1.58E-02
109GO:0006334: nucleosome assembly1.58E-02
110GO:0048278: vesicle docking1.58E-02
111GO:0031408: oxylipin biosynthetic process1.58E-02
112GO:0051321: meiotic cell cycle1.58E-02
113GO:0071456: cellular response to hypoxia1.68E-02
114GO:0010017: red or far-red light signaling pathway1.68E-02
115GO:0009814: defense response, incompatible interaction1.68E-02
116GO:0015031: protein transport1.75E-02
117GO:0009625: response to insect1.79E-02
118GO:0006012: galactose metabolic process1.79E-02
119GO:0009306: protein secretion1.90E-02
120GO:0045492: xylan biosynthetic process1.90E-02
121GO:0042147: retrograde transport, endosome to Golgi2.01E-02
122GO:0009751: response to salicylic acid2.13E-02
123GO:0010197: polar nucleus fusion2.24E-02
124GO:0009960: endosperm development2.24E-02
125GO:0071472: cellular response to salt stress2.24E-02
126GO:0009958: positive gravitropism2.24E-02
127GO:0009058: biosynthetic process2.25E-02
128GO:0061025: membrane fusion2.36E-02
129GO:0048544: recognition of pollen2.36E-02
130GO:0002229: defense response to oomycetes2.61E-02
131GO:0000302: response to reactive oxygen species2.61E-02
132GO:0006891: intra-Golgi vesicle-mediated transport2.61E-02
133GO:0031047: gene silencing by RNA2.73E-02
134GO:1901657: glycosyl compound metabolic process2.86E-02
135GO:0071281: cellular response to iron ion2.86E-02
136GO:0006904: vesicle docking involved in exocytosis3.12E-02
137GO:0000910: cytokinesis3.25E-02
138GO:0001666: response to hypoxia3.39E-02
139GO:0009617: response to bacterium3.51E-02
140GO:0009816: defense response to bacterium, incompatible interaction3.52E-02
141GO:0006906: vesicle fusion3.66E-02
142GO:0006888: ER to Golgi vesicle-mediated transport3.80E-02
143GO:0018298: protein-chromophore linkage4.09E-02
144GO:0008219: cell death4.09E-02
145GO:0006499: N-terminal protein myristoylation4.38E-02
146GO:0000724: double-strand break repair via homologous recombination4.69E-02
147GO:0045087: innate immune response4.84E-02
RankGO TermAdjusted P value
1GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
2GO:0051670: inulinase activity0.00E+00
3GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
4GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
5GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
6GO:0008092: cytoskeletal protein binding0.00E+00
7GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity3.18E-06
8GO:0008428: ribonuclease inhibitor activity3.18E-06
9GO:0008948: oxaloacetate decarboxylase activity7.43E-05
10GO:0016621: cinnamoyl-CoA reductase activity1.96E-04
11GO:0010285: L,L-diaminopimelate aminotransferase activity2.63E-04
12GO:0051669: fructan beta-fructosidase activity2.63E-04
13GO:1990381: ubiquitin-specific protease binding2.63E-04
14GO:0033925: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity2.63E-04
15GO:0031219: levanase activity2.63E-04
16GO:0004566: beta-glucuronidase activity5.78E-04
17GO:0009883: red or far-red light photoreceptor activity5.78E-04
18GO:0051879: Hsp90 protein binding5.78E-04
19GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity5.78E-04
20GO:0008805: carbon-monoxide oxygenase activity5.78E-04
21GO:0015117: thiosulfate transmembrane transporter activity5.78E-04
22GO:0004338: glucan exo-1,3-beta-glucosidase activity5.78E-04
23GO:1901677: phosphate transmembrane transporter activity5.78E-04
24GO:0005457: GDP-fucose transmembrane transporter activity9.39E-04
25GO:0008265: Mo-molybdopterin cofactor sulfurase activity9.39E-04
26GO:0005310: dicarboxylic acid transmembrane transporter activity9.39E-04
27GO:0015141: succinate transmembrane transporter activity9.39E-04
28GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity9.39E-04
29GO:0008020: G-protein coupled photoreceptor activity9.39E-04
30GO:0017077: oxidative phosphorylation uncoupler activity1.34E-03
31GO:0004749: ribose phosphate diphosphokinase activity1.34E-03
32GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.34E-03
33GO:0015131: oxaloacetate transmembrane transporter activity1.34E-03
34GO:0004792: thiosulfate sulfurtransferase activity1.34E-03
35GO:0009916: alternative oxidase activity1.79E-03
36GO:1904264: ubiquitin protein ligase activity involved in ERAD pathway1.79E-03
37GO:0046527: glucosyltransferase activity1.79E-03
38GO:0031386: protein tag2.29E-03
39GO:0008641: small protein activating enzyme activity2.29E-03
40GO:0004040: amidase activity2.29E-03
41GO:0004372: glycine hydroxymethyltransferase activity2.29E-03
42GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.29E-03
43GO:0008474: palmitoyl-(protein) hydrolase activity2.82E-03
44GO:0035252: UDP-xylosyltransferase activity2.82E-03
45GO:0004656: procollagen-proline 4-dioxygenase activity3.40E-03
46GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.40E-03
47GO:0004620: phospholipase activity4.00E-03
48GO:0009881: photoreceptor activity4.00E-03
49GO:0003872: 6-phosphofructokinase activity4.00E-03
50GO:0015140: malate transmembrane transporter activity4.00E-03
51GO:0030170: pyridoxal phosphate binding4.38E-03
52GO:0004034: aldose 1-epimerase activity4.65E-03
53GO:0004525: ribonuclease III activity4.65E-03
54GO:0030247: polysaccharide binding4.87E-03
55GO:0008142: oxysterol binding5.32E-03
56GO:0030246: carbohydrate binding5.68E-03
57GO:0016301: kinase activity5.83E-03
58GO:0004568: chitinase activity7.54E-03
59GO:0005545: 1-phosphatidylinositol binding7.54E-03
60GO:0008559: xenobiotic-transporting ATPase activity8.35E-03
61GO:0047372: acylglycerol lipase activity8.35E-03
62GO:0004364: glutathione transferase activity8.47E-03
63GO:0015116: sulfate transmembrane transporter activity9.17E-03
64GO:0000155: phosphorelay sensor kinase activity1.00E-02
65GO:0031624: ubiquitin conjugating enzyme binding1.09E-02
66GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.09E-02
67GO:0043531: ADP binding1.13E-02
68GO:0004867: serine-type endopeptidase inhibitor activity1.18E-02
69GO:0003712: transcription cofactor activity1.18E-02
70GO:0004725: protein tyrosine phosphatase activity1.28E-02
71GO:0031418: L-ascorbic acid binding1.38E-02
72GO:0046872: metal ion binding1.78E-02
73GO:0008810: cellulase activity1.79E-02
74GO:0003727: single-stranded RNA binding1.90E-02
75GO:0003924: GTPase activity2.17E-02
76GO:0030276: clathrin binding2.24E-02
77GO:0016853: isomerase activity2.36E-02
78GO:0015297: antiporter activity2.81E-02
79GO:0005524: ATP binding3.06E-02
80GO:0008483: transaminase activity3.12E-02
81GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.12E-02
82GO:0005509: calcium ion binding3.19E-02
83GO:0008375: acetylglucosaminyltransferase activity3.66E-02
84GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.73E-02
85GO:0016798: hydrolase activity, acting on glycosyl bonds3.80E-02
86GO:0102483: scopolin beta-glucosidase activity3.80E-02
87GO:0004222: metalloendopeptidase activity4.38E-02
88GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.84E-02
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Gene type



Gene DE type