GO Enrichment Analysis of Co-expressed Genes with
AT4G33670
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 2 | GO:0071474: cellular hyperosmotic response | 0.00E+00 |
| 3 | GO:0070125: mitochondrial translational elongation | 0.00E+00 |
| 4 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 5 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 6 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 7 | GO:0018023: peptidyl-lysine trimethylation | 0.00E+00 |
| 8 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 9 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 10 | GO:0090279: regulation of calcium ion import | 0.00E+00 |
| 11 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 12 | GO:0006415: translational termination | 1.56E-05 |
| 13 | GO:0006659: phosphatidylserine biosynthetic process | 2.11E-04 |
| 14 | GO:0042547: cell wall modification involved in multidimensional cell growth | 2.11E-04 |
| 15 | GO:0051171: regulation of nitrogen compound metabolic process | 2.11E-04 |
| 16 | GO:0000476: maturation of 4.5S rRNA | 2.11E-04 |
| 17 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.11E-04 |
| 18 | GO:0000967: rRNA 5'-end processing | 2.11E-04 |
| 19 | GO:0032544: plastid translation | 2.22E-04 |
| 20 | GO:1900865: chloroplast RNA modification | 3.21E-04 |
| 21 | GO:0045036: protein targeting to chloroplast | 3.76E-04 |
| 22 | GO:0009684: indoleacetic acid biosynthetic process | 4.36E-04 |
| 23 | GO:0015804: neutral amino acid transport | 4.71E-04 |
| 24 | GO:0051262: protein tetramerization | 4.71E-04 |
| 25 | GO:0034470: ncRNA processing | 4.71E-04 |
| 26 | GO:0030187: melatonin biosynthetic process | 4.71E-04 |
| 27 | GO:0018026: peptidyl-lysine monomethylation | 4.71E-04 |
| 28 | GO:0045493: xylan catabolic process | 7.67E-04 |
| 29 | GO:0033591: response to L-ascorbic acid | 7.67E-04 |
| 30 | GO:0009405: pathogenesis | 7.67E-04 |
| 31 | GO:0010589: leaf proximal/distal pattern formation | 7.67E-04 |
| 32 | GO:0080055: low-affinity nitrate transport | 7.67E-04 |
| 33 | GO:0051604: protein maturation | 7.67E-04 |
| 34 | GO:0009647: skotomorphogenesis | 1.09E-03 |
| 35 | GO:0010255: glucose mediated signaling pathway | 1.09E-03 |
| 36 | GO:0046739: transport of virus in multicellular host | 1.09E-03 |
| 37 | GO:0009765: photosynthesis, light harvesting | 1.45E-03 |
| 38 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.45E-03 |
| 39 | GO:0006021: inositol biosynthetic process | 1.45E-03 |
| 40 | GO:0071483: cellular response to blue light | 1.45E-03 |
| 41 | GO:0016123: xanthophyll biosynthetic process | 1.85E-03 |
| 42 | GO:0016120: carotene biosynthetic process | 1.85E-03 |
| 43 | GO:0010236: plastoquinone biosynthetic process | 1.85E-03 |
| 44 | GO:0016032: viral process | 2.24E-03 |
| 45 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.28E-03 |
| 46 | GO:0016554: cytidine to uridine editing | 2.28E-03 |
| 47 | GO:0032973: amino acid export | 2.28E-03 |
| 48 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.28E-03 |
| 49 | GO:0010027: thylakoid membrane organization | 3.03E-03 |
| 50 | GO:0015693: magnesium ion transport | 3.23E-03 |
| 51 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 3.23E-03 |
| 52 | GO:0009395: phospholipid catabolic process | 3.23E-03 |
| 53 | GO:0043090: amino acid import | 3.23E-03 |
| 54 | GO:0009627: systemic acquired resistance | 3.38E-03 |
| 55 | GO:0006413: translational initiation | 3.54E-03 |
| 56 | GO:0015995: chlorophyll biosynthetic process | 3.56E-03 |
| 57 | GO:0000105: histidine biosynthetic process | 3.74E-03 |
| 58 | GO:0006875: cellular metal ion homeostasis | 3.74E-03 |
| 59 | GO:0010078: maintenance of root meristem identity | 3.74E-03 |
| 60 | GO:0043562: cellular response to nitrogen levels | 4.29E-03 |
| 61 | GO:0071482: cellular response to light stimulus | 4.29E-03 |
| 62 | GO:0009657: plastid organization | 4.29E-03 |
| 63 | GO:0009821: alkaloid biosynthetic process | 4.85E-03 |
| 64 | GO:0010206: photosystem II repair | 4.85E-03 |
| 65 | GO:0080144: amino acid homeostasis | 4.85E-03 |
| 66 | GO:0006783: heme biosynthetic process | 4.85E-03 |
| 67 | GO:0045087: innate immune response | 4.99E-03 |
| 68 | GO:0010380: regulation of chlorophyll biosynthetic process | 5.44E-03 |
| 69 | GO:0010267: production of ta-siRNAs involved in RNA interference | 5.44E-03 |
| 70 | GO:0006949: syncytium formation | 6.06E-03 |
| 71 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.06E-03 |
| 72 | GO:1903507: negative regulation of nucleic acid-templated transcription | 6.69E-03 |
| 73 | GO:0006352: DNA-templated transcription, initiation | 6.69E-03 |
| 74 | GO:0009658: chloroplast organization | 6.74E-03 |
| 75 | GO:0016024: CDP-diacylglycerol biosynthetic process | 7.36E-03 |
| 76 | GO:0045037: protein import into chloroplast stroma | 7.36E-03 |
| 77 | GO:0009416: response to light stimulus | 7.80E-03 |
| 78 | GO:0010588: cotyledon vascular tissue pattern formation | 8.04E-03 |
| 79 | GO:2000012: regulation of auxin polar transport | 8.04E-03 |
| 80 | GO:0048467: gynoecium development | 8.75E-03 |
| 81 | GO:0006541: glutamine metabolic process | 8.75E-03 |
| 82 | GO:0010207: photosystem II assembly | 8.75E-03 |
| 83 | GO:0090351: seedling development | 9.48E-03 |
| 84 | GO:0009793: embryo development ending in seed dormancy | 9.75E-03 |
| 85 | GO:0006833: water transport | 1.02E-02 |
| 86 | GO:0000162: tryptophan biosynthetic process | 1.02E-02 |
| 87 | GO:0010187: negative regulation of seed germination | 1.10E-02 |
| 88 | GO:0016998: cell wall macromolecule catabolic process | 1.26E-02 |
| 89 | GO:0061077: chaperone-mediated protein folding | 1.26E-02 |
| 90 | GO:0003333: amino acid transmembrane transport | 1.26E-02 |
| 91 | GO:0031348: negative regulation of defense response | 1.34E-02 |
| 92 | GO:0009814: defense response, incompatible interaction | 1.34E-02 |
| 93 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.34E-02 |
| 94 | GO:0016042: lipid catabolic process | 1.40E-02 |
| 95 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.43E-02 |
| 96 | GO:0016117: carotenoid biosynthetic process | 1.61E-02 |
| 97 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.61E-02 |
| 98 | GO:0034220: ion transmembrane transport | 1.70E-02 |
| 99 | GO:0010087: phloem or xylem histogenesis | 1.70E-02 |
| 100 | GO:0080022: primary root development | 1.70E-02 |
| 101 | GO:0010305: leaf vascular tissue pattern formation | 1.79E-02 |
| 102 | GO:0009958: positive gravitropism | 1.79E-02 |
| 103 | GO:0008654: phospholipid biosynthetic process | 1.98E-02 |
| 104 | GO:0009851: auxin biosynthetic process | 1.98E-02 |
| 105 | GO:0009791: post-embryonic development | 1.98E-02 |
| 106 | GO:0048825: cotyledon development | 1.98E-02 |
| 107 | GO:0045490: pectin catabolic process | 2.14E-02 |
| 108 | GO:1901657: glycosyl compound metabolic process | 2.28E-02 |
| 109 | GO:0030163: protein catabolic process | 2.28E-02 |
| 110 | GO:0009828: plant-type cell wall loosening | 2.38E-02 |
| 111 | GO:0007166: cell surface receptor signaling pathway | 2.45E-02 |
| 112 | GO:0071805: potassium ion transmembrane transport | 2.49E-02 |
| 113 | GO:0008380: RNA splicing | 2.56E-02 |
| 114 | GO:0016126: sterol biosynthetic process | 2.70E-02 |
| 115 | GO:0010411: xyloglucan metabolic process | 3.04E-02 |
| 116 | GO:0018298: protein-chromophore linkage | 3.27E-02 |
| 117 | GO:0007568: aging | 3.62E-02 |
| 118 | GO:0009910: negative regulation of flower development | 3.62E-02 |
| 119 | GO:0048527: lateral root development | 3.62E-02 |
| 120 | GO:0006865: amino acid transport | 3.74E-02 |
| 121 | GO:0009723: response to ethylene | 3.83E-02 |
| 122 | GO:0006810: transport | 3.95E-02 |
| 123 | GO:0055085: transmembrane transport | 4.02E-02 |
| 124 | GO:0006839: mitochondrial transport | 4.24E-02 |
| 125 | GO:0006508: proteolysis | 4.47E-02 |
| 126 | GO:0009640: photomorphogenesis | 4.63E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004636: phosphoribosyl-ATP diphosphatase activity | 0.00E+00 |
| 2 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 3 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 4 | GO:0004635: phosphoribosyl-AMP cyclohydrolase activity | 0.00E+00 |
| 5 | GO:0045435: lycopene epsilon cyclase activity | 0.00E+00 |
| 6 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 7 | GO:0043864: indoleacetamide hydrolase activity | 0.00E+00 |
| 8 | GO:0050613: delta14-sterol reductase activity | 0.00E+00 |
| 9 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 10 | GO:0003747: translation release factor activity | 6.71E-06 |
| 11 | GO:0016149: translation release factor activity, codon specific | 1.76E-05 |
| 12 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 2.11E-04 |
| 13 | GO:0005227: calcium activated cation channel activity | 2.11E-04 |
| 14 | GO:0004853: uroporphyrinogen decarboxylase activity | 2.11E-04 |
| 15 | GO:0004856: xylulokinase activity | 2.11E-04 |
| 16 | GO:0015088: copper uptake transmembrane transporter activity | 2.11E-04 |
| 17 | GO:0016788: hydrolase activity, acting on ester bonds | 2.42E-04 |
| 18 | GO:0015172: acidic amino acid transmembrane transporter activity | 4.71E-04 |
| 19 | GO:0004103: choline kinase activity | 4.71E-04 |
| 20 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 4.71E-04 |
| 21 | GO:0004512: inositol-3-phosphate synthase activity | 4.71E-04 |
| 22 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 4.71E-04 |
| 23 | GO:0016630: protochlorophyllide reductase activity | 4.71E-04 |
| 24 | GO:0031072: heat shock protein binding | 5.67E-04 |
| 25 | GO:0070402: NADPH binding | 7.67E-04 |
| 26 | GO:0004049: anthranilate synthase activity | 7.67E-04 |
| 27 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 7.67E-04 |
| 28 | GO:0003913: DNA photolyase activity | 7.67E-04 |
| 29 | GO:0004148: dihydrolipoyl dehydrogenase activity | 7.67E-04 |
| 30 | GO:0005528: FK506 binding | 8.76E-04 |
| 31 | GO:0035198: miRNA binding | 1.09E-03 |
| 32 | GO:0015175: neutral amino acid transmembrane transporter activity | 1.09E-03 |
| 33 | GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor | 1.09E-03 |
| 34 | GO:0016851: magnesium chelatase activity | 1.09E-03 |
| 35 | GO:0005525: GTP binding | 1.24E-03 |
| 36 | GO:0030570: pectate lyase activity | 1.25E-03 |
| 37 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.45E-03 |
| 38 | GO:0016279: protein-lysine N-methyltransferase activity | 1.45E-03 |
| 39 | GO:0001053: plastid sigma factor activity | 1.45E-03 |
| 40 | GO:0004045: aminoacyl-tRNA hydrolase activity | 1.45E-03 |
| 41 | GO:0016987: sigma factor activity | 1.45E-03 |
| 42 | GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | 1.45E-03 |
| 43 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.45E-03 |
| 44 | GO:0016846: carbon-sulfur lyase activity | 1.85E-03 |
| 45 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.85E-03 |
| 46 | GO:0004040: amidase activity | 1.85E-03 |
| 47 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.28E-03 |
| 48 | GO:0042578: phosphoric ester hydrolase activity | 2.28E-03 |
| 49 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 2.74E-03 |
| 50 | GO:0005261: cation channel activity | 2.74E-03 |
| 51 | GO:0003730: mRNA 3'-UTR binding | 2.74E-03 |
| 52 | GO:0009881: photoreceptor activity | 3.23E-03 |
| 53 | GO:0004033: aldo-keto reductase (NADP) activity | 3.74E-03 |
| 54 | GO:0043022: ribosome binding | 3.74E-03 |
| 55 | GO:0008236: serine-type peptidase activity | 3.75E-03 |
| 56 | GO:0003743: translation initiation factor activity | 4.71E-03 |
| 57 | GO:0003746: translation elongation factor activity | 4.99E-03 |
| 58 | GO:0003993: acid phosphatase activity | 5.21E-03 |
| 59 | GO:0016844: strictosidine synthase activity | 5.44E-03 |
| 60 | GO:0005381: iron ion transmembrane transporter activity | 5.44E-03 |
| 61 | GO:0047372: acylglycerol lipase activity | 6.69E-03 |
| 62 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 7.50E-03 |
| 63 | GO:0015095: magnesium ion transmembrane transporter activity | 8.04E-03 |
| 64 | GO:0009982: pseudouridine synthase activity | 8.04E-03 |
| 65 | GO:0003725: double-stranded RNA binding | 8.04E-03 |
| 66 | GO:0008266: poly(U) RNA binding | 8.75E-03 |
| 67 | GO:0015171: amino acid transmembrane transporter activity | 9.61E-03 |
| 68 | GO:0052689: carboxylic ester hydrolase activity | 1.01E-02 |
| 69 | GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity | 1.02E-02 |
| 70 | GO:0102336: 3-oxo-arachidoyl-CoA synthase activity | 1.02E-02 |
| 71 | GO:0102337: 3-oxo-cerotoyl-CoA synthase activity | 1.02E-02 |
| 72 | GO:0003714: transcription corepressor activity | 1.10E-02 |
| 73 | GO:0015079: potassium ion transmembrane transporter activity | 1.18E-02 |
| 74 | GO:0051082: unfolded protein binding | 1.24E-02 |
| 75 | GO:0003924: GTPase activity | 1.46E-02 |
| 76 | GO:0016829: lyase activity | 1.68E-02 |
| 77 | GO:0008080: N-acetyltransferase activity | 1.79E-02 |
| 78 | GO:0001085: RNA polymerase II transcription factor binding | 1.79E-02 |
| 79 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 2.00E-02 |
| 80 | GO:0016787: hydrolase activity | 2.47E-02 |
| 81 | GO:0015250: water channel activity | 2.70E-02 |
| 82 | GO:0042802: identical protein binding | 2.73E-02 |
| 83 | GO:0102483: scopolin beta-glucosidase activity | 3.04E-02 |
| 84 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 3.27E-02 |
| 85 | GO:0016491: oxidoreductase activity | 3.38E-02 |
| 86 | GO:0004222: metalloendopeptidase activity | 3.50E-02 |
| 87 | GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding | 3.62E-02 |
| 88 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 3.62E-02 |
| 89 | GO:0050897: cobalt ion binding | 3.62E-02 |
| 90 | GO:0050660: flavin adenine dinucleotide binding | 3.83E-02 |
| 91 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 3.86E-02 |
| 92 | GO:0008422: beta-glucosidase activity | 4.11E-02 |
| 93 | GO:0003723: RNA binding | 4.16E-02 |
| 94 | GO:0004185: serine-type carboxypeptidase activity | 4.63E-02 |