GO Enrichment Analysis of Co-expressed Genes with
AT4G33500
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0044249: cellular biosynthetic process | 0.00E+00 |
| 2 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 3 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 4 | GO:0090042: tubulin deacetylation | 0.00E+00 |
| 5 | GO:0009657: plastid organization | 1.85E-05 |
| 6 | GO:0010729: positive regulation of hydrogen peroxide biosynthetic process | 4.18E-05 |
| 7 | GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process | 4.18E-05 |
| 8 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 1.04E-04 |
| 9 | GO:0060359: response to ammonium ion | 1.04E-04 |
| 10 | GO:0006730: one-carbon metabolic process | 1.31E-04 |
| 11 | GO:0006760: folic acid-containing compound metabolic process | 1.78E-04 |
| 12 | GO:0043157: response to cation stress | 1.78E-04 |
| 13 | GO:2001141: regulation of RNA biosynthetic process | 2.63E-04 |
| 14 | GO:0010239: chloroplast mRNA processing | 2.63E-04 |
| 15 | GO:0016556: mRNA modification | 2.63E-04 |
| 16 | GO:0046656: folic acid biosynthetic process | 3.53E-04 |
| 17 | GO:0044205: 'de novo' UMP biosynthetic process | 3.53E-04 |
| 18 | GO:0016123: xanthophyll biosynthetic process | 4.50E-04 |
| 19 | GO:0042793: transcription from plastid promoter | 5.51E-04 |
| 20 | GO:0009959: negative gravitropism | 5.51E-04 |
| 21 | GO:0017148: negative regulation of translation | 6.58E-04 |
| 22 | GO:0046654: tetrahydrofolate biosynthetic process | 6.58E-04 |
| 23 | GO:0019509: L-methionine salvage from methylthioadenosine | 6.58E-04 |
| 24 | GO:1901259: chloroplast rRNA processing | 6.58E-04 |
| 25 | GO:0006400: tRNA modification | 7.69E-04 |
| 26 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 7.69E-04 |
| 27 | GO:0048564: photosystem I assembly | 8.84E-04 |
| 28 | GO:0006353: DNA-templated transcription, termination | 8.84E-04 |
| 29 | GO:0006526: arginine biosynthetic process | 1.00E-03 |
| 30 | GO:0009932: cell tip growth | 1.00E-03 |
| 31 | GO:0071482: cellular response to light stimulus | 1.00E-03 |
| 32 | GO:0006098: pentose-phosphate shunt | 1.13E-03 |
| 33 | GO:0019538: protein metabolic process | 1.39E-03 |
| 34 | GO:0006352: DNA-templated transcription, initiation | 1.53E-03 |
| 35 | GO:0010015: root morphogenesis | 1.53E-03 |
| 36 | GO:0006094: gluconeogenesis | 1.82E-03 |
| 37 | GO:0010207: photosystem II assembly | 1.97E-03 |
| 38 | GO:0010020: chloroplast fission | 1.97E-03 |
| 39 | GO:0071732: cellular response to nitric oxide | 2.13E-03 |
| 40 | GO:0090351: seedling development | 2.13E-03 |
| 41 | GO:0009116: nucleoside metabolic process | 2.46E-03 |
| 42 | GO:0016575: histone deacetylation | 2.62E-03 |
| 43 | GO:0071369: cellular response to ethylene stimulus | 3.15E-03 |
| 44 | GO:0016117: carotenoid biosynthetic process | 3.52E-03 |
| 45 | GO:0009658: chloroplast organization | 3.73E-03 |
| 46 | GO:0042254: ribosome biogenesis | 3.80E-03 |
| 47 | GO:0002229: defense response to oomycetes | 4.51E-03 |
| 48 | GO:0009630: gravitropism | 4.72E-03 |
| 49 | GO:0071281: cellular response to iron ion | 4.93E-03 |
| 50 | GO:0071805: potassium ion transmembrane transport | 5.36E-03 |
| 51 | GO:0001666: response to hypoxia | 5.81E-03 |
| 52 | GO:0010027: thylakoid membrane organization | 5.81E-03 |
| 53 | GO:0009637: response to blue light | 8.23E-03 |
| 54 | GO:0009853: photorespiration | 8.23E-03 |
| 55 | GO:0010114: response to red light | 9.82E-03 |
| 56 | GO:0006364: rRNA processing | 1.21E-02 |
| 57 | GO:0006813: potassium ion transport | 1.21E-02 |
| 58 | GO:0009793: embryo development ending in seed dormancy | 1.32E-02 |
| 59 | GO:0006096: glycolytic process | 1.36E-02 |
| 60 | GO:0016036: cellular response to phosphate starvation | 2.18E-02 |
| 61 | GO:0006413: translational initiation | 2.18E-02 |
| 62 | GO:0009451: RNA modification | 2.33E-02 |
| 63 | GO:0009723: response to ethylene | 3.47E-02 |
| 64 | GO:0080167: response to karrikin | 3.65E-02 |
| 65 | GO:0006412: translation | 3.65E-02 |
| 66 | GO:0015979: photosynthesis | 4.01E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 2 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 3 | GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity | 0.00E+00 |
| 4 | GO:0043014: alpha-tubulin binding | 0.00E+00 |
| 5 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 6 | GO:0051721: protein phosphatase 2A binding | 0.00E+00 |
| 7 | GO:0042903: tubulin deacetylase activity | 0.00E+00 |
| 8 | GO:0004326: tetrahydrofolylpolyglutamate synthase activity | 1.11E-07 |
| 9 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 4.18E-05 |
| 10 | GO:0043621: protein self-association | 4.79E-05 |
| 11 | GO:0004150: dihydroneopterin aldolase activity | 1.04E-04 |
| 12 | GO:0010291: carotene beta-ring hydroxylase activity | 1.04E-04 |
| 13 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 1.04E-04 |
| 14 | GO:0048487: beta-tubulin binding | 2.63E-04 |
| 15 | GO:0043023: ribosomal large subunit binding | 2.63E-04 |
| 16 | GO:0003723: RNA binding | 3.34E-04 |
| 17 | GO:0001053: plastid sigma factor activity | 3.53E-04 |
| 18 | GO:0016987: sigma factor activity | 3.53E-04 |
| 19 | GO:0004040: amidase activity | 4.50E-04 |
| 20 | GO:0004332: fructose-bisphosphate aldolase activity | 5.51E-04 |
| 21 | GO:0043022: ribosome binding | 8.84E-04 |
| 22 | GO:0032041: NAD-dependent histone deacetylase activity (H3-K14 specific) | 1.00E-03 |
| 23 | GO:0019843: rRNA binding | 1.77E-03 |
| 24 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.82E-03 |
| 25 | GO:0004407: histone deacetylase activity | 2.46E-03 |
| 26 | GO:0015079: potassium ion transmembrane transporter activity | 2.62E-03 |
| 27 | GO:0005525: GTP binding | 3.49E-03 |
| 28 | GO:0008536: Ran GTPase binding | 3.91E-03 |
| 29 | GO:0016853: isomerase activity | 4.11E-03 |
| 30 | GO:0004519: endonuclease activity | 7.38E-03 |
| 31 | GO:0004222: metalloendopeptidase activity | 7.47E-03 |
| 32 | GO:0003746: translation elongation factor activity | 8.23E-03 |
| 33 | GO:0003993: acid phosphatase activity | 8.48E-03 |
| 34 | GO:0051539: 4 iron, 4 sulfur cluster binding | 9.01E-03 |
| 35 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 1.21E-02 |
| 36 | GO:0008026: ATP-dependent helicase activity | 1.62E-02 |
| 37 | GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | 1.86E-02 |
| 38 | GO:0004252: serine-type endopeptidase activity | 1.96E-02 |
| 39 | GO:0003743: translation initiation factor activity | 2.56E-02 |
| 40 | GO:0003682: chromatin binding | 3.26E-02 |
| 41 | GO:0020037: heme binding | 3.86E-02 |
| 42 | GO:0004722: protein serine/threonine phosphatase activity | 4.43E-02 |
| 43 | GO:0003924: GTPase activity | 4.81E-02 |
| 44 | GO:0003735: structural constituent of ribosome | 4.85E-02 |