Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G33470

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006399: tRNA metabolic process0.00E+00
2GO:0070125: mitochondrial translational elongation0.00E+00
3GO:0009249: protein lipoylation0.00E+00
4GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate0.00E+00
5GO:0090071: negative regulation of ribosome biogenesis0.00E+00
6GO:0046460: neutral lipid biosynthetic process0.00E+00
7GO:0046838: phosphorylated carbohydrate dephosphorylation0.00E+00
8GO:0044249: cellular biosynthetic process0.00E+00
9GO:0042407: cristae formation0.00E+00
10GO:0042821: pyridoxal biosynthetic process0.00E+00
11GO:0009106: lipoate metabolic process0.00E+00
12GO:0042820: vitamin B6 catabolic process0.00E+00
13GO:0015882: L-ascorbic acid transport0.00E+00
14GO:0042817: pyridoxal metabolic process0.00E+00
15GO:0018023: peptidyl-lysine trimethylation0.00E+00
16GO:0005983: starch catabolic process8.11E-05
17GO:0045038: protein import into chloroplast thylakoid membrane1.43E-04
18GO:0009793: embryo development ending in seed dormancy1.58E-04
19GO:0042793: transcription from plastid promoter2.05E-04
20GO:0010190: cytochrome b6f complex assembly2.05E-04
21GO:0042371: vitamin K biosynthetic process3.92E-04
22GO:2000021: regulation of ion homeostasis3.92E-04
23GO:1902458: positive regulation of stomatal opening3.92E-04
24GO:0010028: xanthophyll cycle3.92E-04
25GO:0048363: mucilage pectin metabolic process3.92E-04
26GO:0000023: maltose metabolic process3.92E-04
27GO:0010729: positive regulation of hydrogen peroxide biosynthetic process3.92E-04
28GO:0006419: alanyl-tRNA aminoacylation3.92E-04
29GO:0046901: tetrahydrofolylpolyglutamate biosynthetic process3.92E-04
30GO:0000476: maturation of 4.5S rRNA3.92E-04
31GO:0009443: pyridoxal 5'-phosphate salvage3.92E-04
32GO:0000967: rRNA 5'-end processing3.92E-04
33GO:0015671: oxygen transport3.92E-04
34GO:0043266: regulation of potassium ion transport3.92E-04
35GO:0019478: D-amino acid catabolic process3.92E-04
36GO:0042547: cell wall modification involved in multidimensional cell growth3.92E-04
37GO:0006353: DNA-templated transcription, termination4.48E-04
38GO:0071482: cellular response to light stimulus5.48E-04
39GO:0009657: plastid organization5.48E-04
40GO:0019432: triglyceride biosynthetic process6.57E-04
41GO:0001682: tRNA 5'-leader removal8.49E-04
42GO:1903426: regulation of reactive oxygen species biosynthetic process8.49E-04
43GO:0034470: ncRNA processing8.49E-04
44GO:0010198: synergid death8.49E-04
45GO:0006739: NADP metabolic process8.49E-04
46GO:0009629: response to gravity8.49E-04
47GO:1900871: chloroplast mRNA modification8.49E-04
48GO:0006423: cysteinyl-tRNA aminoacylation8.49E-04
49GO:0007154: cell communication8.49E-04
50GO:0006435: threonyl-tRNA aminoacylation8.49E-04
51GO:0018026: peptidyl-lysine monomethylation8.49E-04
52GO:0071668: plant-type cell wall assembly8.49E-04
53GO:0009220: pyrimidine ribonucleotide biosynthetic process8.49E-04
54GO:0006782: protoporphyrinogen IX biosynthetic process9.02E-04
55GO:0009089: lysine biosynthetic process via diaminopimelate1.04E-03
56GO:0006352: DNA-templated transcription, initiation1.04E-03
57GO:0009658: chloroplast organization1.20E-03
58GO:0015995: chlorophyll biosynthetic process1.25E-03
59GO:2000012: regulation of auxin polar transport1.34E-03
60GO:0005977: glycogen metabolic process1.38E-03
61GO:0090506: axillary shoot meristem initiation1.38E-03
62GO:0006617: SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition1.38E-03
63GO:0015940: pantothenate biosynthetic process1.38E-03
64GO:0071732: cellular response to nitric oxide1.70E-03
65GO:0090351: seedling development1.70E-03
66GO:2001141: regulation of RNA biosynthetic process1.99E-03
67GO:0009102: biotin biosynthetic process1.99E-03
68GO:0010239: chloroplast mRNA processing1.99E-03
69GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity1.99E-03
70GO:0008615: pyridoxine biosynthetic process1.99E-03
71GO:0016556: mRNA modification1.99E-03
72GO:0061077: chaperone-mediated protein folding2.54E-03
73GO:0051781: positive regulation of cell division2.67E-03
74GO:0022622: root system development2.67E-03
75GO:0071483: cellular response to blue light2.67E-03
76GO:0006734: NADH metabolic process2.67E-03
77GO:0044205: 'de novo' UMP biosynthetic process2.67E-03
78GO:0010021: amylopectin biosynthetic process2.67E-03
79GO:0006730: one-carbon metabolic process2.78E-03
80GO:0071369: cellular response to ethylene stimulus3.04E-03
81GO:0009107: lipoate biosynthetic process3.42E-03
82GO:0016123: xanthophyll biosynthetic process3.42E-03
83GO:0010236: plastoquinone biosynthetic process3.42E-03
84GO:0016554: cytidine to uridine editing4.23E-03
85GO:0032973: amino acid export4.23E-03
86GO:0050665: hydrogen peroxide biosynthetic process4.23E-03
87GO:0009854: oxidative photosynthetic carbon pathway5.09E-03
88GO:0009648: photoperiodism5.09E-03
89GO:0019509: L-methionine salvage from methylthioadenosine5.09E-03
90GO:0042372: phylloquinone biosynthetic process5.09E-03
91GO:0010067: procambium histogenesis5.09E-03
92GO:0042026: protein refolding5.09E-03
93GO:0006458: 'de novo' protein folding5.09E-03
94GO:0034389: lipid particle organization5.09E-03
95GO:0017148: negative regulation of translation5.09E-03
96GO:1901259: chloroplast rRNA processing5.09E-03
97GO:0030488: tRNA methylation5.09E-03
98GO:0071281: cellular response to iron ion5.87E-03
99GO:0032880: regulation of protein localization6.02E-03
100GO:0009772: photosynthetic electron transport in photosystem II6.02E-03
101GO:0043090: amino acid import6.02E-03
102GO:0006614: SRP-dependent cotranslational protein targeting to membrane6.02E-03
103GO:0010196: nonphotochemical quenching6.02E-03
104GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process6.02E-03
105GO:0006400: tRNA modification6.02E-03
106GO:0000105: histidine biosynthetic process7.00E-03
107GO:0070413: trehalose metabolism in response to stress7.00E-03
108GO:2000070: regulation of response to water deprivation7.00E-03
109GO:0010027: thylakoid membrane organization7.46E-03
110GO:0009932: cell tip growth8.03E-03
111GO:0022900: electron transport chain8.03E-03
112GO:0006526: arginine biosynthetic process8.03E-03
113GO:0010204: defense response signaling pathway, resistance gene-independent8.03E-03
114GO:0032544: plastid translation8.03E-03
115GO:0009627: systemic acquired resistance8.34E-03
116GO:0098656: anion transmembrane transport9.12E-03
117GO:0006098: pentose-phosphate shunt9.12E-03
118GO:0010206: photosystem II repair9.12E-03
119GO:0080144: amino acid homeostasis9.12E-03
120GO:0006783: heme biosynthetic process9.12E-03
121GO:0005975: carbohydrate metabolic process9.42E-03
122GO:0009790: embryo development9.93E-03
123GO:0043067: regulation of programmed cell death1.03E-02
124GO:0006779: porphyrin-containing compound biosynthetic process1.03E-02
125GO:1900865: chloroplast RNA modification1.03E-02
126GO:0048354: mucilage biosynthetic process involved in seed coat development1.03E-02
127GO:0006413: translational initiation1.12E-02
128GO:0045036: protein targeting to chloroplast1.14E-02
129GO:0006949: syncytium formation1.14E-02
130GO:0045087: innate immune response1.24E-02
131GO:0010015: root morphogenesis1.27E-02
132GO:0019684: photosynthesis, light reaction1.27E-02
133GO:0009073: aromatic amino acid family biosynthetic process1.27E-02
134GO:1903507: negative regulation of nucleic acid-templated transcription1.27E-02
135GO:0006415: translational termination1.27E-02
136GO:0045037: protein import into chloroplast stroma1.40E-02
137GO:0006631: fatty acid metabolic process1.48E-02
138GO:0009725: response to hormone1.53E-02
139GO:0006094: gluconeogenesis1.53E-02
140GO:0010114: response to red light1.60E-02
141GO:0010207: photosystem II assembly1.66E-02
142GO:0010020: chloroplast fission1.66E-02
143GO:0009969: xyloglucan biosynthetic process1.81E-02
144GO:0006071: glycerol metabolic process1.95E-02
145GO:0000162: tryptophan biosynthetic process1.95E-02
146GO:0009409: response to cold2.02E-02
147GO:0005992: trehalose biosynthetic process2.10E-02
148GO:0009116: nucleoside metabolic process2.10E-02
149GO:0048511: rhythmic process2.41E-02
150GO:0007005: mitochondrion organization2.57E-02
151GO:0031348: negative regulation of defense response2.57E-02
152GO:0019748: secondary metabolic process2.57E-02
153GO:0009814: defense response, incompatible interaction2.57E-02
154GO:2000022: regulation of jasmonic acid mediated signaling pathway2.57E-02
155GO:0009831: plant-type cell wall modification involved in multidimensional cell growth2.73E-02
156GO:0010089: xylem development2.90E-02
157GO:0009306: protein secretion2.90E-02
158GO:0016117: carotenoid biosynthetic process3.07E-02
159GO:0009789: positive regulation of abscisic acid-activated signaling pathway3.07E-02
160GO:0008284: positive regulation of cell proliferation3.07E-02
161GO:0010087: phloem or xylem histogenesis3.25E-02
162GO:0006606: protein import into nucleus3.25E-02
163GO:0000271: polysaccharide biosynthetic process3.25E-02
164GO:0008033: tRNA processing3.25E-02
165GO:0015979: photosynthesis3.30E-02
166GO:0010197: polar nucleus fusion3.42E-02
167GO:0009958: positive gravitropism3.42E-02
168GO:0045489: pectin biosynthetic process3.42E-02
169GO:0042752: regulation of circadian rhythm3.61E-02
170GO:0019252: starch biosynthetic process3.79E-02
171GO:0000302: response to reactive oxygen species3.98E-02
172GO:0002229: defense response to oomycetes3.98E-02
173GO:0006508: proteolysis4.04E-02
174GO:0009630: gravitropism4.17E-02
175GO:1901657: glycosyl compound metabolic process4.36E-02
176GO:0009828: plant-type cell wall loosening4.56E-02
177GO:0071805: potassium ion transmembrane transport4.76E-02
178GO:0006633: fatty acid biosynthetic process4.82E-02
179GO:0000910: cytokinesis4.96E-02
RankGO TermAdjusted P value
1GO:0003949: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity0.00E+00
2GO:0004358: glutamate N-acetyltransferase activity0.00E+00
3GO:0033819: lipoyl(octanoyl) transferase activity0.00E+00
4GO:0005048: signal sequence binding0.00E+00
5GO:0004076: biotin synthase activity0.00E+00
6GO:0005363: maltose transmembrane transporter activity0.00E+00
7GO:0050236: pyridoxine:NADP 4-dehydrogenase activity0.00E+00
8GO:0004588: orotate phosphoribosyltransferase activity0.00E+00
9GO:0004590: orotidine-5'-phosphate decarboxylase activity0.00E+00
10GO:0050613: delta14-sterol reductase activity0.00E+00
11GO:0004561: alpha-N-acetylglucosaminidase activity0.00E+00
12GO:0047538: 2-carboxy-D-arabinitol-1-phosphatase activity0.00E+00
13GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity0.00E+00
14GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
15GO:0015229: L-ascorbic acid transporter activity0.00E+00
16GO:0004326: tetrahydrofolylpolyglutamate synthase activity6.85E-06
17GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase6.85E-06
18GO:0070402: NADPH binding2.39E-05
19GO:0016851: magnesium chelatase activity5.22E-05
20GO:0001053: plastid sigma factor activity9.22E-05
21GO:0016987: sigma factor activity9.22E-05
22GO:0005528: FK506 binding1.92E-04
23GO:0005525: GTP binding2.20E-04
24GO:0004176: ATP-dependent peptidase activity2.53E-04
25GO:0016784: 3-mercaptopyruvate sulfurtransferase activity3.92E-04
26GO:0005344: oxygen transporter activity3.92E-04
27GO:0042286: glutamate-1-semialdehyde 2,1-aminomutase activity3.92E-04
28GO:0005227: calcium activated cation channel activity3.92E-04
29GO:0004733: pyridoxamine-phosphate oxidase activity3.92E-04
30GO:0003864: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity3.92E-04
31GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity3.92E-04
32GO:0004856: xylulokinase activity3.92E-04
33GO:0009496: plastoquinol--plastocyanin reductase activity3.92E-04
34GO:0050308: sugar-phosphatase activity3.92E-04
35GO:0004813: alanine-tRNA ligase activity3.92E-04
36GO:0019203: carbohydrate phosphatase activity3.92E-04
37GO:0004853: uroporphyrinogen decarboxylase activity3.92E-04
38GO:0052856: NADHX epimerase activity3.92E-04
39GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity3.92E-04
40GO:0052857: NADPHX epimerase activity3.92E-04
41GO:0010291: carotene beta-ring hydroxylase activity8.49E-04
42GO:0017118: lipoyltransferase activity8.49E-04
43GO:0009977: proton motive force dependent protein transmembrane transporter activity8.49E-04
44GO:0016415: octanoyltransferase activity8.49E-04
45GO:0004817: cysteine-tRNA ligase activity8.49E-04
46GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity8.49E-04
47GO:0004829: threonine-tRNA ligase activity8.49E-04
48GO:0019156: isoamylase activity8.49E-04
49GO:0008237: metallopeptidase activity8.84E-04
50GO:0052692: raffinose alpha-galactosidase activity1.38E-03
51GO:0003913: DNA photolyase activity1.38E-03
52GO:0004557: alpha-galactosidase activity1.38E-03
53GO:0043023: ribosomal large subunit binding1.99E-03
54GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity1.99E-03
55GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity1.99E-03
56GO:0019201: nucleotide kinase activity1.99E-03
57GO:0004792: thiosulfate sulfurtransferase activity1.99E-03
58GO:0016149: translation release factor activity, codon specific1.99E-03
59GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity1.99E-03
60GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.99E-03
61GO:0004659: prenyltransferase activity2.67E-03
62GO:0016279: protein-lysine N-methyltransferase activity2.67E-03
63GO:0004045: aminoacyl-tRNA hydrolase activity2.67E-03
64GO:0008891: glycolate oxidase activity2.67E-03
65GO:0003755: peptidyl-prolyl cis-trans isomerase activity3.24E-03
66GO:0045300: acyl-[acyl-carrier-protein] desaturase activity3.42E-03
67GO:0016773: phosphotransferase activity, alcohol group as acceptor3.42E-03
68GO:0004040: amidase activity3.42E-03
69GO:0003924: GTPase activity3.50E-03
70GO:2001070: starch binding4.23E-03
71GO:0080030: methyl indole-3-acetate esterase activity4.23E-03
72GO:0004332: fructose-bisphosphate aldolase activity4.23E-03
73GO:0004526: ribonuclease P activity4.23E-03
74GO:0004556: alpha-amylase activity4.23E-03
75GO:0010181: FMN binding4.49E-03
76GO:0004017: adenylate kinase activity5.09E-03
77GO:0016832: aldehyde-lyase activity5.09E-03
78GO:0004144: diacylglycerol O-acyltransferase activity5.09E-03
79GO:0004723: calcium-dependent protein serine/threonine phosphatase activity5.09E-03
80GO:0016788: hydrolase activity, acting on ester bonds5.34E-03
81GO:0009881: photoreceptor activity6.02E-03
82GO:0008312: 7S RNA binding7.00E-03
83GO:0043022: ribosome binding7.00E-03
84GO:0004033: aldo-keto reductase (NADP) activity7.00E-03
85GO:0003723: RNA binding7.68E-03
86GO:0003747: translation release factor activity9.12E-03
87GO:0008138: protein tyrosine/serine/threonine phosphatase activity9.12E-03
88GO:0016614: oxidoreductase activity, acting on CH-OH group of donors1.13E-02
89GO:0004805: trehalose-phosphatase activity1.14E-02
90GO:0003746: translation elongation factor activity1.24E-02
91GO:0044183: protein binding involved in protein folding1.27E-02
92GO:0008378: galactosyltransferase activity1.40E-02
93GO:0000049: tRNA binding1.40E-02
94GO:0003743: translation initiation factor activity1.50E-02
95GO:0004565: beta-galactosidase activity1.53E-02
96GO:0004022: alcohol dehydrogenase (NAD) activity1.53E-02
97GO:0005315: inorganic phosphate transmembrane transporter activity1.53E-02
98GO:0008083: growth factor activity1.66E-02
99GO:0008266: poly(U) RNA binding1.66E-02
100GO:0051537: 2 iron, 2 sulfur cluster binding1.73E-02
101GO:0043621: protein self-association1.73E-02
102GO:0102336: 3-oxo-arachidoyl-CoA synthase activity1.95E-02
103GO:0102337: 3-oxo-cerotoyl-CoA synthase activity1.95E-02
104GO:0102338: 3-oxo-lignoceronyl-CoA synthase activity1.95E-02
105GO:0051536: iron-sulfur cluster binding2.10E-02
106GO:0003714: transcription corepressor activity2.10E-02
107GO:0003899: DNA-directed 5'-3' RNA polymerase activity2.16E-02
108GO:0015079: potassium ion transmembrane transporter activity2.25E-02
109GO:0003729: mRNA binding2.41E-02
110GO:0033612: receptor serine/threonine kinase binding2.41E-02
111GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.57E-02
112GO:0030570: pectate lyase activity2.73E-02
113GO:0008514: organic anion transmembrane transporter activity2.90E-02
114GO:0008536: Ran GTPase binding3.42E-02
115GO:0008080: N-acetyltransferase activity3.42E-02
116GO:0016853: isomerase activity3.61E-02
117GO:0004872: receptor activity3.79E-02
118GO:0004252: serine-type endopeptidase activity4.27E-02
119GO:0016791: phosphatase activity4.56E-02
120GO:0008483: transaminase activity4.76E-02
121GO:0016597: amino acid binding4.96E-02
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Gene type



Gene DE type