Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G32330

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0006573: valine metabolic process0.00E+00
2GO:0090355: positive regulation of auxin metabolic process0.00E+00
3GO:0090697: post-embryonic plant organ morphogenesis0.00E+00
4GO:0090358: positive regulation of tryptophan metabolic process0.00E+00
5GO:1905157: positive regulation of photosynthesis0.00E+00
6GO:2000469: negative regulation of peroxidase activity0.00E+00
7GO:0033494: ferulate metabolic process0.00E+00
8GO:2000121: regulation of removal of superoxide radicals0.00E+00
9GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
10GO:0009904: chloroplast accumulation movement5.56E-05
11GO:0009903: chloroplast avoidance movement1.13E-04
12GO:0031426: polycistronic mRNA processing2.20E-04
13GO:0048657: anther wall tapetum cell differentiation2.20E-04
14GO:0006551: leucine metabolic process2.20E-04
15GO:0046167: glycerol-3-phosphate biosynthetic process2.20E-04
16GO:0043007: maintenance of rDNA2.20E-04
17GO:1902334: fructose export from vacuole to cytoplasm2.20E-04
18GO:0010362: negative regulation of anion channel activity by blue light2.20E-04
19GO:0015969: guanosine tetraphosphate metabolic process2.20E-04
20GO:0009641: shade avoidance4.00E-04
21GO:0006898: receptor-mediated endocytosis4.90E-04
22GO:0006650: glycerophospholipid metabolic process4.90E-04
23GO:0010541: acropetal auxin transport4.90E-04
24GO:0010155: regulation of proton transport4.90E-04
25GO:0015790: UDP-xylose transport4.90E-04
26GO:0048527: lateral root development6.00E-04
27GO:0010143: cutin biosynthetic process6.76E-04
28GO:0010160: formation of animal organ boundary7.98E-04
29GO:0006696: ergosterol biosynthetic process7.98E-04
30GO:0046168: glycerol-3-phosphate catabolic process7.98E-04
31GO:0055114: oxidation-reduction process8.74E-04
32GO:0009647: skotomorphogenesis1.14E-03
33GO:0010587: miRNA catabolic process1.14E-03
34GO:0009963: positive regulation of flavonoid biosynthetic process1.14E-03
35GO:1990019: protein storage vacuole organization1.14E-03
36GO:0090308: regulation of methylation-dependent chromatin silencing1.14E-03
37GO:0010239: chloroplast mRNA processing1.14E-03
38GO:0043481: anthocyanin accumulation in tissues in response to UV light1.14E-03
39GO:0006072: glycerol-3-phosphate metabolic process1.14E-03
40GO:0048443: stamen development1.44E-03
41GO:0009649: entrainment of circadian clock1.51E-03
42GO:0031122: cytoplasmic microtubule organization1.51E-03
43GO:0008295: spermidine biosynthetic process1.51E-03
44GO:0032366: intracellular sterol transport1.51E-03
45GO:0006021: inositol biosynthetic process1.51E-03
46GO:0071483: cellular response to blue light1.51E-03
47GO:0048442: sepal development1.51E-03
48GO:0046283: anthocyanin-containing compound metabolic process1.93E-03
49GO:1902183: regulation of shoot apical meristem development1.93E-03
50GO:0010158: abaxial cell fate specification1.93E-03
51GO:0034052: positive regulation of plant-type hypersensitive response1.93E-03
52GO:0044550: secondary metabolite biosynthetic process2.25E-03
53GO:0060918: auxin transport2.38E-03
54GO:0046855: inositol phosphate dephosphorylation2.38E-03
55GO:0009643: photosynthetic acclimation2.38E-03
56GO:0010315: auxin efflux2.38E-03
57GO:0010076: maintenance of floral meristem identity2.86E-03
58GO:0009082: branched-chain amino acid biosynthetic process2.86E-03
59GO:0048280: vesicle fusion with Golgi apparatus2.86E-03
60GO:0009099: valine biosynthetic process2.86E-03
61GO:0009854: oxidative photosynthetic carbon pathway2.86E-03
62GO:0010019: chloroplast-nucleus signaling pathway2.86E-03
63GO:0009648: photoperiodism2.86E-03
64GO:0000122: negative regulation of transcription from RNA polymerase II promoter3.36E-03
65GO:0030307: positive regulation of cell growth3.36E-03
66GO:1900056: negative regulation of leaf senescence3.36E-03
67GO:0015995: chlorophyll biosynthetic process3.78E-03
68GO:0043068: positive regulation of programmed cell death3.90E-03
69GO:0009690: cytokinin metabolic process3.90E-03
70GO:0000105: histidine biosynthetic process3.90E-03
71GO:0007155: cell adhesion3.90E-03
72GO:0009097: isoleucine biosynthetic process4.47E-03
73GO:0009932: cell tip growth4.47E-03
74GO:0006811: ion transport4.61E-03
75GO:0010119: regulation of stomatal movement4.84E-03
76GO:0048507: meristem development5.06E-03
77GO:2000024: regulation of leaf development5.06E-03
78GO:0009637: response to blue light5.30E-03
79GO:0010380: regulation of chlorophyll biosynthetic process5.68E-03
80GO:0009638: phototropism5.68E-03
81GO:0048354: mucilage biosynthetic process involved in seed coat development5.68E-03
82GO:0006995: cellular response to nitrogen starvation6.32E-03
83GO:0019538: protein metabolic process6.32E-03
84GO:0048441: petal development6.32E-03
85GO:0043069: negative regulation of programmed cell death6.32E-03
86GO:0010192: mucilage biosynthetic process6.32E-03
87GO:0006896: Golgi to vacuole transport6.32E-03
88GO:0009640: photomorphogenesis6.83E-03
89GO:0009826: unidimensional cell growth6.94E-03
90GO:0072593: reactive oxygen species metabolic process6.98E-03
91GO:0043085: positive regulation of catalytic activity6.98E-03
92GO:0009750: response to fructose6.98E-03
93GO:0016485: protein processing6.98E-03
94GO:0010216: maintenance of DNA methylation6.98E-03
95GO:0000038: very long-chain fatty acid metabolic process6.98E-03
96GO:0009658: chloroplast organization7.29E-03
97GO:0008643: carbohydrate transport7.39E-03
98GO:0016024: CDP-diacylglycerol biosynthetic process7.68E-03
99GO:0008361: regulation of cell size7.68E-03
100GO:0006790: sulfur compound metabolic process7.68E-03
101GO:0009785: blue light signaling pathway8.39E-03
102GO:0030048: actin filament-based movement8.39E-03
103GO:0009718: anthocyanin-containing compound biosynthetic process8.39E-03
104GO:0009767: photosynthetic electron transport chain8.39E-03
105GO:0009416: response to light stimulus8.56E-03
106GO:0007015: actin filament organization9.13E-03
107GO:0010223: secondary shoot formation9.13E-03
108GO:0009887: animal organ morphogenesis9.13E-03
109GO:0010540: basipetal auxin transport9.13E-03
110GO:0048440: carpel development9.13E-03
111GO:0010224: response to UV-B9.54E-03
112GO:0006857: oligopeptide transport9.88E-03
113GO:0019853: L-ascorbic acid biosynthetic process9.90E-03
114GO:0046854: phosphatidylinositol phosphorylation9.90E-03
115GO:0042343: indole glucosinolate metabolic process9.90E-03
116GO:0042753: positive regulation of circadian rhythm1.07E-02
117GO:0006863: purine nucleobase transport1.07E-02
118GO:0000162: tryptophan biosynthetic process1.07E-02
119GO:0009944: polarity specification of adaxial/abaxial axis1.15E-02
120GO:0000027: ribosomal large subunit assembly1.15E-02
121GO:0007017: microtubule-based process1.23E-02
122GO:0051260: protein homooligomerization1.32E-02
123GO:0048511: rhythmic process1.32E-02
124GO:0098542: defense response to other organism1.32E-02
125GO:0019915: lipid storage1.32E-02
126GO:0048278: vesicle docking1.32E-02
127GO:0009814: defense response, incompatible interaction1.40E-02
128GO:0019748: secondary metabolic process1.40E-02
129GO:0009294: DNA mediated transformation1.49E-02
130GO:0071215: cellular response to abscisic acid stimulus1.49E-02
131GO:0006281: DNA repair1.57E-02
132GO:0019722: calcium-mediated signaling1.58E-02
133GO:0010584: pollen exine formation1.58E-02
134GO:0016117: carotenoid biosynthetic process1.68E-02
135GO:0042147: retrograde transport, endosome to Golgi1.68E-02
136GO:0010154: fruit development1.87E-02
137GO:0009958: positive gravitropism1.87E-02
138GO:0006520: cellular amino acid metabolic process1.87E-02
139GO:0010268: brassinosteroid homeostasis1.87E-02
140GO:0045489: pectin biosynthetic process1.87E-02
141GO:0061025: membrane fusion1.97E-02
142GO:0009646: response to absence of light1.97E-02
143GO:0009749: response to glucose2.07E-02
144GO:0008654: phospholipid biosynthetic process2.07E-02
145GO:0009851: auxin biosynthetic process2.07E-02
146GO:0006623: protein targeting to vacuole2.07E-02
147GO:0009791: post-embryonic development2.07E-02
148GO:0006891: intra-Golgi vesicle-mediated transport2.17E-02
149GO:0016132: brassinosteroid biosynthetic process2.17E-02
150GO:0010583: response to cyclopentenone2.28E-02
151GO:0010150: leaf senescence2.28E-02
152GO:0032502: developmental process2.28E-02
153GO:0010228: vegetative to reproductive phase transition of meristem2.39E-02
154GO:0071555: cell wall organization2.47E-02
155GO:0010252: auxin homeostasis2.49E-02
156GO:0009639: response to red or far red light2.49E-02
157GO:0016125: sterol metabolic process2.49E-02
158GO:0007267: cell-cell signaling2.60E-02
159GO:0009911: positive regulation of flower development2.82E-02
160GO:0006906: vesicle fusion3.05E-02
161GO:0006888: ER to Golgi vesicle-mediated transport3.17E-02
162GO:0048573: photoperiodism, flowering3.17E-02
163GO:0030244: cellulose biosynthetic process3.41E-02
164GO:0018298: protein-chromophore linkage3.41E-02
165GO:0000160: phosphorelay signal transduction system3.53E-02
166GO:0010218: response to far red light3.66E-02
167GO:0009834: plant-type secondary cell wall biogenesis3.66E-02
168GO:0007568: aging3.78E-02
169GO:0009910: negative regulation of flower development3.78E-02
170GO:0045893: positive regulation of transcription, DNA-templated3.83E-02
171GO:0009409: response to cold3.84E-02
172GO:0009853: photorespiration4.03E-02
173GO:0034599: cellular response to oxidative stress4.16E-02
174GO:0006887: exocytosis4.56E-02
175GO:0046777: protein autophosphorylation4.66E-02
176GO:0009926: auxin polar transport4.83E-02
177GO:0009744: response to sucrose4.83E-02
178GO:0016567: protein ubiquitination4.86E-02
179GO:0042546: cell wall biogenesis4.97E-02
RankGO TermAdjusted P value
1GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
2GO:0046905: phytoene synthase activity0.00E+00
3GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
4GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
5GO:0016767: geranylgeranyl-diphosphate geranylgeranyltransferase activity0.00E+00
6GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
7GO:0000293: ferric-chelate reductase activity8.18E-05
8GO:0008568: microtubule-severing ATPase activity2.20E-04
9GO:0051996: squalene synthase activity2.20E-04
10GO:0016618: hydroxypyruvate reductase activity2.20E-04
11GO:0003984: acetolactate synthase activity2.20E-04
12GO:0004328: formamidase activity2.20E-04
13GO:0003879: ATP phosphoribosyltransferase activity2.20E-04
14GO:0010347: L-galactose-1-phosphate phosphatase activity2.20E-04
15GO:0035671: enone reductase activity2.20E-04
16GO:0046906: tetrapyrrole binding2.20E-04
17GO:0047259: glucomannan 4-beta-mannosyltransferase activity2.20E-04
18GO:0080132: fatty acid alpha-hydroxylase activity2.20E-04
19GO:0047066: phospholipid-hydroperoxide glutathione peroxidase activity2.20E-04
20GO:0048531: beta-1,3-galactosyltransferase activity4.90E-04
21GO:0005353: fructose transmembrane transporter activity4.90E-04
22GO:0008728: GTP diphosphokinase activity4.90E-04
23GO:0004310: farnesyl-diphosphate farnesyltransferase activity4.90E-04
24GO:0080045: quercetin 3'-O-glucosyltransferase activity4.90E-04
25GO:0004766: spermidine synthase activity4.90E-04
26GO:0052832: inositol monophosphate 3-phosphatase activity4.90E-04
27GO:0008934: inositol monophosphate 1-phosphatase activity4.90E-04
28GO:0052833: inositol monophosphate 4-phosphatase activity4.90E-04
29GO:0005464: UDP-xylose transmembrane transporter activity4.90E-04
30GO:0004148: dihydrolipoyl dehydrogenase activity7.98E-04
31GO:0030267: glyoxylate reductase (NADP) activity7.98E-04
32GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity7.98E-04
33GO:0050734: hydroxycinnamoyltransferase activity7.98E-04
34GO:0003913: DNA photolyase activity7.98E-04
35GO:0016491: oxidoreductase activity1.08E-03
36GO:0022890: inorganic cation transmembrane transporter activity1.14E-03
37GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides1.14E-03
38GO:0009882: blue light photoreceptor activity1.14E-03
39GO:0048027: mRNA 5'-UTR binding1.14E-03
40GO:0070696: transmembrane receptor protein serine/threonine kinase binding1.93E-03
41GO:0005506: iron ion binding2.06E-03
42GO:0035673: oligopeptide transmembrane transporter activity2.38E-03
43GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.38E-03
44GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity2.38E-03
45GO:0080046: quercetin 4'-O-glucosyltransferase activity2.38E-03
46GO:0051753: mannan synthase activity2.86E-03
47GO:0009927: histidine phosphotransfer kinase activity2.86E-03
48GO:0004602: glutathione peroxidase activity2.86E-03
49GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity2.86E-03
50GO:0016722: oxidoreductase activity, oxidizing metal ions2.87E-03
51GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen2.93E-03
52GO:0019899: enzyme binding3.36E-03
53GO:0019825: oxygen binding4.00E-03
54GO:0047196: long-chain-alcohol O-fatty-acyltransferase activity4.47E-03
55GO:0103095: wax ester synthase activity4.47E-03
56GO:0020037: heme binding5.21E-03
57GO:0000149: SNARE binding5.79E-03
58GO:0005484: SNAP receptor activity6.83E-03
59GO:0008515: sucrose transmembrane transporter activity6.98E-03
60GO:0015386: potassium:proton antiporter activity6.98E-03
61GO:0000976: transcription regulatory region sequence-specific DNA binding7.68E-03
62GO:0015198: oligopeptide transporter activity7.68E-03
63GO:0051287: NAD binding8.28E-03
64GO:0010329: auxin efflux transmembrane transporter activity8.39E-03
65GO:0008081: phosphoric diester hydrolase activity8.39E-03
66GO:0000155: phosphorelay sensor kinase activity8.39E-03
67GO:0003774: motor activity9.13E-03
68GO:0008146: sulfotransferase activity9.90E-03
69GO:0051119: sugar transmembrane transporter activity9.90E-03
70GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups1.13E-02
71GO:0015079: potassium ion transmembrane transporter activity1.23E-02
72GO:0005345: purine nucleobase transmembrane transporter activity1.23E-02
73GO:0022857: transmembrane transporter activity1.24E-02
74GO:0004842: ubiquitin-protein transferase activity1.30E-02
75GO:0008408: 3'-5' exonuclease activity1.32E-02
76GO:0016746: transferase activity, transferring acyl groups1.35E-02
77GO:0030570: pectate lyase activity1.49E-02
78GO:0004527: exonuclease activity1.87E-02
79GO:0005355: glucose transmembrane transporter activity1.97E-02
80GO:0010181: FMN binding1.97E-02
81GO:0015299: solute:proton antiporter activity1.97E-02
82GO:0016791: phosphatase activity2.49E-02
83GO:0016597: amino acid binding2.71E-02
84GO:0042802: identical protein binding2.90E-02
85GO:0050897: cobalt ion binding3.78E-02
86GO:0061630: ubiquitin protein ligase activity4.58E-02
87GO:0052689: carboxylic ester hydrolase activity4.81E-02
88GO:0004185: serine-type carboxypeptidase activity4.83E-02
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Gene type



Gene DE type