Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G31980

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:1902009: positive regulation of toxin transport0.00E+00
2GO:0032499: detection of peptidoglycan0.00E+00
3GO:0002752: cell surface pattern recognition receptor signaling pathway0.00E+00
4GO:0010647: positive regulation of cell communication0.00E+00
5GO:1902001: fatty acid transmembrane transport0.00E+00
6GO:1902289: negative regulation of defense response to oomycetes0.00E+00
7GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
8GO:0033198: response to ATP0.00E+00
9GO:2000378: negative regulation of reactive oxygen species metabolic process0.00E+00
10GO:0046109: uridine biosynthetic process0.00E+00
11GO:0002764: immune response-regulating signaling pathway0.00E+00
12GO:0046680: response to DDT0.00E+00
13GO:0006983: ER overload response0.00E+00
14GO:0016559: peroxisome fission1.95E-05
15GO:0010112: regulation of systemic acquired resistance3.78E-05
16GO:0000266: mitochondrial fission1.00E-04
17GO:1900425: negative regulation of defense response to bacterium2.39E-04
18GO:0006952: defense response3.33E-04
19GO:0032491: detection of molecule of fungal origin4.32E-04
20GO:0042350: GDP-L-fucose biosynthetic process4.32E-04
21GO:0099132: ATP hydrolysis coupled cation transmembrane transport4.32E-04
22GO:0009609: response to symbiotic bacterium4.32E-04
23GO:0033306: phytol metabolic process4.32E-04
24GO:0000032: cell wall mannoprotein biosynthetic process4.32E-04
25GO:0006643: membrane lipid metabolic process4.32E-04
26GO:0010045: response to nickel cation4.32E-04
27GO:1900150: regulation of defense response to fungus5.18E-04
28GO:0010150: leaf senescence7.25E-04
29GO:0006486: protein glycosylation8.47E-04
30GO:0015012: heparan sulfate proteoglycan biosynthetic process9.33E-04
31GO:0071668: plant-type cell wall assembly9.33E-04
32GO:0080181: lateral root branching9.33E-04
33GO:0006024: glycosaminoglycan biosynthetic process9.33E-04
34GO:0055088: lipid homeostasis9.33E-04
35GO:0010115: regulation of abscisic acid biosynthetic process9.33E-04
36GO:0015908: fatty acid transport9.33E-04
37GO:0043066: negative regulation of apoptotic process9.33E-04
38GO:0005976: polysaccharide metabolic process9.33E-04
39GO:0010042: response to manganese ion9.33E-04
40GO:0044419: interspecies interaction between organisms9.33E-04
41GO:0031349: positive regulation of defense response9.33E-04
42GO:0010271: regulation of chlorophyll catabolic process9.33E-04
43GO:0051258: protein polymerization9.33E-04
44GO:0060919: auxin influx9.33E-04
45GO:0033512: L-lysine catabolic process to acetyl-CoA via saccharopine9.33E-04
46GO:0009617: response to bacterium9.88E-04
47GO:0006468: protein phosphorylation1.14E-03
48GO:0042351: 'de novo' GDP-L-fucose biosynthetic process1.52E-03
49GO:0044375: regulation of peroxisome size1.52E-03
50GO:0033591: response to L-ascorbic acid1.52E-03
51GO:0015695: organic cation transport1.52E-03
52GO:1900055: regulation of leaf senescence1.52E-03
53GO:0007188: adenylate cyclase-modulating G-protein coupled receptor signaling pathway1.52E-03
54GO:0016045: detection of bacterium1.52E-03
55GO:0002230: positive regulation of defense response to virus by host1.52E-03
56GO:1900140: regulation of seedling development1.52E-03
57GO:0010359: regulation of anion channel activity1.52E-03
58GO:0080163: regulation of protein serine/threonine phosphatase activity1.52E-03
59GO:0008219: cell death1.71E-03
60GO:0006979: response to oxidative stress1.82E-03
61GO:0010053: root epidermal cell differentiation1.96E-03
62GO:0007568: aging2.06E-03
63GO:1902290: positive regulation of defense response to oomycetes2.19E-03
64GO:0046713: borate transport2.19E-03
65GO:0009298: GDP-mannose biosynthetic process2.19E-03
66GO:0043207: response to external biotic stimulus2.19E-03
67GO:0072334: UDP-galactose transmembrane transport2.19E-03
68GO:0030100: regulation of endocytosis2.19E-03
69GO:0009052: pentose-phosphate shunt, non-oxidative branch2.19E-03
70GO:0009226: nucleotide-sugar biosynthetic process2.19E-03
71GO:0015696: ammonium transport2.19E-03
72GO:0071323: cellular response to chitin2.19E-03
73GO:2000377: regulation of reactive oxygen species metabolic process2.42E-03
74GO:0080147: root hair cell development2.42E-03
75GO:0060548: negative regulation of cell death2.95E-03
76GO:0006085: acetyl-CoA biosynthetic process2.95E-03
77GO:0072488: ammonium transmembrane transport2.95E-03
78GO:0071219: cellular response to molecule of bacterial origin2.95E-03
79GO:0015031: protein transport3.18E-03
80GO:0097428: protein maturation by iron-sulfur cluster transfer3.78E-03
81GO:0009229: thiamine diphosphate biosynthetic process3.78E-03
82GO:0016094: polyprenol biosynthetic process3.78E-03
83GO:0006465: signal peptide processing3.78E-03
84GO:0034052: positive regulation of plant-type hypersensitive response3.78E-03
85GO:0006470: protein dephosphorylation4.09E-03
86GO:0000413: protein peptidyl-prolyl isomerization4.48E-03
87GO:0006014: D-ribose metabolic process4.68E-03
88GO:0045491: xylan metabolic process4.68E-03
89GO:0010315: auxin efflux4.68E-03
90GO:0033365: protein localization to organelle4.68E-03
91GO:0009228: thiamine biosynthetic process4.68E-03
92GO:0006574: valine catabolic process4.68E-03
93GO:0009749: response to glucose5.57E-03
94GO:0010555: response to mannitol5.64E-03
95GO:2000067: regulation of root morphogenesis5.64E-03
96GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response5.64E-03
97GO:0031930: mitochondria-nucleus signaling pathway5.64E-03
98GO:0048509: regulation of meristem development5.64E-03
99GO:0006096: glycolytic process5.82E-03
100GO:0071554: cell wall organization or biogenesis5.97E-03
101GO:0009626: plant-type hypersensitive response6.31E-03
102GO:0010038: response to metal ion6.67E-03
103GO:0010044: response to aluminum ion6.67E-03
104GO:0009610: response to symbiotic fungus6.67E-03
105GO:0046470: phosphatidylcholine metabolic process6.67E-03
106GO:0015937: coenzyme A biosynthetic process6.67E-03
107GO:1900057: positive regulation of leaf senescence6.67E-03
108GO:0009787: regulation of abscisic acid-activated signaling pathway7.76E-03
109GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline7.76E-03
110GO:0009819: drought recovery7.76E-03
111GO:0009850: auxin metabolic process7.76E-03
112GO:0006997: nucleus organization8.91E-03
113GO:0010204: defense response signaling pathway, resistance gene-independent8.91E-03
114GO:0009808: lignin metabolic process8.91E-03
115GO:0010208: pollen wall assembly8.91E-03
116GO:0007186: G-protein coupled receptor signaling pathway8.91E-03
117GO:0010497: plasmodesmata-mediated intercellular transport8.91E-03
118GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway9.48E-03
119GO:0010200: response to chitin9.48E-03
120GO:0050832: defense response to fungus9.65E-03
121GO:0016192: vesicle-mediated transport9.73E-03
122GO:0009060: aerobic respiration1.01E-02
123GO:0006098: pentose-phosphate shunt1.01E-02
124GO:0007165: signal transduction1.01E-02
125GO:0080144: amino acid homeostasis1.01E-02
126GO:0019432: triglyceride biosynthetic process1.01E-02
127GO:0046916: cellular transition metal ion homeostasis1.01E-02
128GO:0016049: cell growth1.08E-02
129GO:1900426: positive regulation of defense response to bacterium1.14E-02
130GO:0010380: regulation of chlorophyll biosynthetic process1.14E-02
131GO:0006886: intracellular protein transport1.24E-02
132GO:0043069: negative regulation of programmed cell death1.27E-02
133GO:0010215: cellulose microfibril organization1.27E-02
134GO:0006032: chitin catabolic process1.27E-02
135GO:0010043: response to zinc ion1.31E-02
136GO:0009750: response to fructose1.41E-02
137GO:0030148: sphingolipid biosynthetic process1.41E-02
138GO:0000038: very long-chain fatty acid metabolic process1.41E-02
139GO:0019684: photosynthesis, light reaction1.41E-02
140GO:0009682: induced systemic resistance1.41E-02
141GO:0043085: positive regulation of catalytic activity1.41E-02
142GO:0042742: defense response to bacterium1.50E-02
143GO:0045037: protein import into chloroplast stroma1.55E-02
144GO:0006006: glucose metabolic process1.70E-02
145GO:2000012: regulation of auxin polar transport1.70E-02
146GO:0006897: endocytosis1.71E-02
147GO:0007166: cell surface receptor signaling pathway1.76E-02
148GO:0010540: basipetal auxin transport1.85E-02
149GO:0034605: cellular response to heat1.85E-02
150GO:0002237: response to molecule of bacterial origin1.85E-02
151GO:0007034: vacuolar transport1.85E-02
152GO:0009744: response to sucrose1.86E-02
153GO:0070588: calcium ion transmembrane transport2.01E-02
154GO:0007031: peroxisome organization2.01E-02
155GO:0010167: response to nitrate2.01E-02
156GO:0046688: response to copper ion2.01E-02
157GO:0019853: L-ascorbic acid biosynthetic process2.01E-02
158GO:0034976: response to endoplasmic reticulum stress2.17E-02
159GO:0009863: salicylic acid mediated signaling pathway2.33E-02
160GO:0030150: protein import into mitochondrial matrix2.33E-02
161GO:0006825: copper ion transport2.50E-02
162GO:0051302: regulation of cell division2.50E-02
163GO:0016998: cell wall macromolecule catabolic process2.68E-02
164GO:0007005: mitochondrion organization2.85E-02
165GO:0031348: negative regulation of defense response2.85E-02
166GO:0030245: cellulose catabolic process2.85E-02
167GO:0009306: protein secretion3.22E-02
168GO:0010584: pollen exine formation3.22E-02
169GO:0045492: xylan biosynthetic process3.22E-02
170GO:0006284: base-excision repair3.22E-02
171GO:0009620: response to fungus3.26E-02
172GO:0070417: cellular response to cold3.41E-02
173GO:0080022: primary root development3.61E-02
174GO:0042391: regulation of membrane potential3.61E-02
175GO:0009742: brassinosteroid mediated signaling pathway3.78E-02
176GO:0006662: glycerol ether metabolic process3.81E-02
177GO:0071472: cellular response to salt stress3.81E-02
178GO:0009646: response to absence of light4.01E-02
179GO:0035556: intracellular signal transduction4.09E-02
180GO:0019252: starch biosynthetic process4.21E-02
181GO:0002229: defense response to oomycetes4.42E-02
182GO:0009630: gravitropism4.63E-02
183GO:0007264: small GTPase mediated signal transduction4.63E-02
184GO:0030163: protein catabolic process4.85E-02
RankGO TermAdjusted P value
1GO:2001080: chitosan binding0.00E+00
2GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
3GO:0052821: DNA-7-methyladenine glycosylase activity0.00E+00
4GO:0003905: alkylbase DNA N-glycosylase activity0.00E+00
5GO:0043916: DNA-7-methylguanine glycosylase activity0.00E+00
6GO:0050334: thiaminase activity0.00E+00
7GO:0005212: structural constituent of eye lens0.00E+00
8GO:0052822: DNA-3-methylguanine glycosylase activity0.00E+00
9GO:0008320: protein transmembrane transporter activity1.31E-05
10GO:0004714: transmembrane receptor protein tyrosine kinase activity1.95E-05
11GO:0019199: transmembrane receptor protein kinase activity1.09E-04
12GO:0015245: fatty acid transporter activity4.32E-04
13GO:0004149: dihydrolipoyllysine-residue succinyltransferase activity4.32E-04
14GO:0050577: GDP-L-fucose synthase activity4.32E-04
15GO:0004476: mannose-6-phosphate isomerase activity4.32E-04
16GO:0046964: 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity4.32E-04
17GO:0019707: protein-cysteine S-acyltransferase activity4.32E-04
18GO:0016301: kinase activity5.50E-04
19GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.40E-04
20GO:0030955: potassium ion binding8.92E-04
21GO:0004743: pyruvate kinase activity8.92E-04
22GO:0030775: glucuronoxylan 4-O-methyltransferase activity9.33E-04
23GO:0004594: pantothenate kinase activity9.33E-04
24GO:0050403: trans-zeatin O-beta-D-glucosyltransferase activity9.33E-04
25GO:0050502: cis-zeatin O-beta-D-glucosyltransferase activity9.33E-04
26GO:0045140: inositol phosphoceramide synthase activity9.33E-04
27GO:0015036: disulfide oxidoreductase activity9.33E-04
28GO:0004713: protein tyrosine kinase activity1.04E-03
29GO:0004674: protein serine/threonine kinase activity1.27E-03
30GO:0004751: ribose-5-phosphate isomerase activity1.52E-03
31GO:0001664: G-protein coupled receptor binding1.52E-03
32GO:0000030: mannosyltransferase activity1.52E-03
33GO:0008442: 3-hydroxyisobutyrate dehydrogenase activity1.52E-03
34GO:0016531: copper chaperone activity1.52E-03
35GO:0016174: NAD(P)H oxidase activity1.52E-03
36GO:0031683: G-protein beta/gamma-subunit complex binding1.52E-03
37GO:0004672: protein kinase activity1.61E-03
38GO:0004365: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity2.19E-03
39GO:0010178: IAA-amino acid conjugate hydrolase activity2.19E-03
40GO:0019706: protein-cysteine S-palmitoyltransferase activity2.94E-03
41GO:0033612: receptor serine/threonine kinase binding2.94E-03
42GO:0010328: auxin influx transmembrane transporter activity2.95E-03
43GO:0005496: steroid binding3.78E-03
44GO:0070696: transmembrane receptor protein serine/threonine kinase binding3.78E-03
45GO:0008725: DNA-3-methyladenine glycosylase activity3.78E-03
46GO:0005459: UDP-galactose transmembrane transporter activity3.78E-03
47GO:0002094: polyprenyltransferase activity3.78E-03
48GO:0005546: phosphatidylinositol-4,5-bisphosphate binding3.78E-03
49GO:0008519: ammonium transmembrane transporter activity4.68E-03
50GO:0004656: procollagen-proline 4-dioxygenase activity5.64E-03
51GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity5.64E-03
52GO:0004747: ribokinase activity5.64E-03
53GO:0004602: glutathione peroxidase activity5.64E-03
54GO:0004144: diacylglycerol O-acyltransferase activity5.64E-03
55GO:0008865: fructokinase activity7.76E-03
56GO:0016413: O-acetyltransferase activity8.17E-03
57GO:0004630: phospholipase D activity8.91E-03
58GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity8.91E-03
59GO:0008375: acetylglucosaminyltransferase activity9.68E-03
60GO:0008138: protein tyrosine/serine/threonine phosphatase activity1.01E-02
61GO:0004568: chitinase activity1.27E-02
62GO:0008171: O-methyltransferase activity1.27E-02
63GO:0008047: enzyme activator activity1.27E-02
64GO:0015020: glucuronosyltransferase activity1.27E-02
65GO:0004871: signal transducer activity1.27E-02
66GO:0004864: protein phosphatase inhibitor activity1.27E-02
67GO:0005509: calcium ion binding1.29E-02
68GO:0008559: xenobiotic-transporting ATPase activity1.41E-02
69GO:0015198: oligopeptide transporter activity1.55E-02
70GO:0004712: protein serine/threonine/tyrosine kinase activity1.57E-02
71GO:0050661: NADP binding1.64E-02
72GO:0031072: heat shock protein binding1.70E-02
73GO:0005388: calcium-transporting ATPase activity1.70E-02
74GO:0010329: auxin efflux transmembrane transporter activity1.70E-02
75GO:0004190: aspartic-type endopeptidase activity2.01E-02
76GO:0030552: cAMP binding2.01E-02
77GO:0030553: cGMP binding2.01E-02
78GO:0008061: chitin binding2.01E-02
79GO:0004725: protein tyrosine phosphatase activity2.17E-02
80GO:0003755: peptidyl-prolyl cis-trans isomerase activity2.17E-02
81GO:0051287: NAD binding2.25E-02
82GO:0051536: iron-sulfur cluster binding2.33E-02
83GO:0031418: L-ascorbic acid binding2.33E-02
84GO:0003954: NADH dehydrogenase activity2.33E-02
85GO:0005216: ion channel activity2.50E-02
86GO:0008810: cellulase activity3.04E-02
87GO:0003756: protein disulfide isomerase activity3.22E-02
88GO:0004499: N,N-dimethylaniline monooxygenase activity3.22E-02
89GO:0080043: quercetin 3-O-glucosyltransferase activity3.26E-02
90GO:0080044: quercetin 7-O-glucosyltransferase activity3.26E-02
91GO:0047134: protein-disulfide reductase activity3.41E-02
92GO:0005102: receptor binding3.41E-02
93GO:0005249: voltage-gated potassium channel activity3.61E-02
94GO:0030551: cyclic nucleotide binding3.61E-02
95GO:0004791: thioredoxin-disulfide reductase activity4.01E-02
96GO:0016853: isomerase activity4.01E-02
97GO:0050662: coenzyme binding4.01E-02
98GO:0004722: protein serine/threonine phosphatase activity4.70E-02
99GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.85E-02
100GO:0004252: serine-type endopeptidase activity4.94E-02
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Gene type



Gene DE type