GO Enrichment Analysis of Co-expressed Genes with
AT4G31840
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 2 | GO:0006003: fructose 2,6-bisphosphate metabolic process | 0.00E+00 |
| 3 | GO:0000488: maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 4 | GO:0006399: tRNA metabolic process | 0.00E+00 |
| 5 | GO:0015843: methylammonium transport | 0.00E+00 |
| 6 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 7 | GO:0032194: ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate | 0.00E+00 |
| 8 | GO:0018131: oxazole or thiazole biosynthetic process | 0.00E+00 |
| 9 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 10 | GO:0000489: maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA) | 0.00E+00 |
| 11 | GO:0007638: mechanosensory behavior | 0.00E+00 |
| 12 | GO:0000455: enzyme-directed rRNA pseudouridine synthesis | 0.00E+00 |
| 13 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 14 | GO:0001578: microtubule bundle formation | 1.92E-05 |
| 15 | GO:0000373: Group II intron splicing | 2.25E-05 |
| 16 | GO:0009658: chloroplast organization | 2.48E-05 |
| 17 | GO:0051322: anaphase | 7.53E-05 |
| 18 | GO:0042372: phylloquinone biosynthetic process | 2.30E-04 |
| 19 | GO:0006400: tRNA modification | 2.99E-04 |
| 20 | GO:0010480: microsporocyte differentiation | 3.47E-04 |
| 21 | GO:0042371: vitamin K biosynthetic process | 3.47E-04 |
| 22 | GO:0043609: regulation of carbon utilization | 3.47E-04 |
| 23 | GO:0006419: alanyl-tRNA aminoacylation | 3.47E-04 |
| 24 | GO:0006002: fructose 6-phosphate metabolic process | 4.61E-04 |
| 25 | GO:0042325: regulation of phosphorylation | 7.56E-04 |
| 26 | GO:0009220: pyrimidine ribonucleotide biosynthetic process | 7.56E-04 |
| 27 | GO:0042550: photosystem I stabilization | 7.56E-04 |
| 28 | GO:0071258: cellular response to gravity | 7.56E-04 |
| 29 | GO:0000086: G2/M transition of mitotic cell cycle | 7.56E-04 |
| 30 | GO:0010569: regulation of double-strand break repair via homologous recombination | 7.56E-04 |
| 31 | GO:0045036: protein targeting to chloroplast | 7.61E-04 |
| 32 | GO:0000160: phosphorelay signal transduction system | 1.21E-03 |
| 33 | GO:0051127: positive regulation of actin nucleation | 1.22E-03 |
| 34 | GO:0019419: sulfate reduction | 1.22E-03 |
| 35 | GO:0006000: fructose metabolic process | 1.22E-03 |
| 36 | GO:0009934: regulation of meristem structural organization | 1.27E-03 |
| 37 | GO:0010020: chloroplast fission | 1.27E-03 |
| 38 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.36E-03 |
| 39 | GO:0015696: ammonium transport | 1.76E-03 |
| 40 | GO:0046739: transport of virus in multicellular host | 1.76E-03 |
| 41 | GO:0016556: mRNA modification | 1.76E-03 |
| 42 | GO:0043572: plastid fission | 1.76E-03 |
| 43 | GO:2001141: regulation of RNA biosynthetic process | 1.76E-03 |
| 44 | GO:0005992: trehalose biosynthetic process | 1.76E-03 |
| 45 | GO:0007231: osmosensory signaling pathway | 1.76E-03 |
| 46 | GO:0019344: cysteine biosynthetic process | 1.76E-03 |
| 47 | GO:0051639: actin filament network formation | 1.76E-03 |
| 48 | GO:0019048: modulation by virus of host morphology or physiology | 1.76E-03 |
| 49 | GO:0016572: histone phosphorylation | 1.76E-03 |
| 50 | GO:0031048: chromatin silencing by small RNA | 1.76E-03 |
| 51 | GO:0016998: cell wall macromolecule catabolic process | 2.13E-03 |
| 52 | GO:0006306: DNA methylation | 2.13E-03 |
| 53 | GO:0044205: 'de novo' UMP biosynthetic process | 2.37E-03 |
| 54 | GO:0009165: nucleotide biosynthetic process | 2.37E-03 |
| 55 | GO:0009755: hormone-mediated signaling pathway | 2.37E-03 |
| 56 | GO:0051764: actin crosslink formation | 2.37E-03 |
| 57 | GO:0072488: ammonium transmembrane transport | 2.37E-03 |
| 58 | GO:0033500: carbohydrate homeostasis | 2.37E-03 |
| 59 | GO:0006552: leucine catabolic process | 2.37E-03 |
| 60 | GO:0051567: histone H3-K9 methylation | 2.37E-03 |
| 61 | GO:0007020: microtubule nucleation | 2.37E-03 |
| 62 | GO:0046785: microtubule polymerization | 3.03E-03 |
| 63 | GO:0010236: plastoquinone biosynthetic process | 3.03E-03 |
| 64 | GO:1902183: regulation of shoot apical meristem development | 3.03E-03 |
| 65 | GO:0010158: abaxial cell fate specification | 3.03E-03 |
| 66 | GO:0048578: positive regulation of long-day photoperiodism, flowering | 3.03E-03 |
| 67 | GO:0009736: cytokinin-activated signaling pathway | 3.10E-03 |
| 68 | GO:0006342: chromatin silencing | 3.49E-03 |
| 69 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.74E-03 |
| 70 | GO:0009228: thiamine biosynthetic process | 3.74E-03 |
| 71 | GO:0016458: gene silencing | 3.74E-03 |
| 72 | GO:0010405: arabinogalactan protein metabolic process | 3.74E-03 |
| 73 | GO:0010389: regulation of G2/M transition of mitotic cell cycle | 3.74E-03 |
| 74 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.74E-03 |
| 75 | GO:0006139: nucleobase-containing compound metabolic process | 3.74E-03 |
| 76 | GO:0042793: transcription from plastid promoter | 3.74E-03 |
| 77 | GO:0006468: protein phosphorylation | 4.30E-03 |
| 78 | GO:0030488: tRNA methylation | 4.50E-03 |
| 79 | GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity | 4.50E-03 |
| 80 | GO:0009828: plant-type cell wall loosening | 5.22E-03 |
| 81 | GO:0000082: G1/S transition of mitotic cell cycle | 5.32E-03 |
| 82 | GO:0006207: 'de novo' pyrimidine nucleobase biosynthetic process | 5.32E-03 |
| 83 | GO:0010444: guard mother cell differentiation | 5.32E-03 |
| 84 | GO:0022904: respiratory electron transport chain | 5.32E-03 |
| 85 | GO:0015693: magnesium ion transport | 5.32E-03 |
| 86 | GO:0009610: response to symbiotic fungus | 5.32E-03 |
| 87 | GO:0006955: immune response | 5.32E-03 |
| 88 | GO:0048528: post-embryonic root development | 5.32E-03 |
| 89 | GO:0009772: photosynthetic electron transport in photosystem II | 5.32E-03 |
| 90 | GO:0010050: vegetative phase change | 5.32E-03 |
| 91 | GO:0048437: floral organ development | 5.32E-03 |
| 92 | GO:0051607: defense response to virus | 5.89E-03 |
| 93 | GO:0000910: cytokinesis | 5.89E-03 |
| 94 | GO:0042255: ribosome assembly | 6.17E-03 |
| 95 | GO:0006353: DNA-templated transcription, termination | 6.17E-03 |
| 96 | GO:0070413: trehalose metabolism in response to stress | 6.17E-03 |
| 97 | GO:0009850: auxin metabolic process | 6.17E-03 |
| 98 | GO:0019375: galactolipid biosynthetic process | 6.17E-03 |
| 99 | GO:0009704: de-etiolation | 6.17E-03 |
| 100 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 6.17E-03 |
| 101 | GO:0006402: mRNA catabolic process | 6.17E-03 |
| 102 | GO:0010052: guard cell differentiation | 7.08E-03 |
| 103 | GO:0006526: arginine biosynthetic process | 7.08E-03 |
| 104 | GO:0032544: plastid translation | 7.08E-03 |
| 105 | GO:0071482: cellular response to light stimulus | 7.08E-03 |
| 106 | GO:0009827: plant-type cell wall modification | 7.08E-03 |
| 107 | GO:0010497: plasmodesmata-mediated intercellular transport | 7.08E-03 |
| 108 | GO:0010411: xyloglucan metabolic process | 7.35E-03 |
| 109 | GO:2000024: regulation of leaf development | 8.04E-03 |
| 110 | GO:0009051: pentose-phosphate shunt, oxidative branch | 8.04E-03 |
| 111 | GO:0031425: chloroplast RNA processing | 9.03E-03 |
| 112 | GO:0009638: phototropism | 9.03E-03 |
| 113 | GO:0006535: cysteine biosynthetic process from serine | 1.01E-02 |
| 114 | GO:0000103: sulfate assimilation | 1.01E-02 |
| 115 | GO:0030422: production of siRNA involved in RNA interference | 1.01E-02 |
| 116 | GO:0006949: syncytium formation | 1.01E-02 |
| 117 | GO:0006415: translational termination | 1.12E-02 |
| 118 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.12E-02 |
| 119 | GO:0006352: DNA-templated transcription, initiation | 1.12E-02 |
| 120 | GO:0048229: gametophyte development | 1.12E-02 |
| 121 | GO:0010015: root morphogenesis | 1.12E-02 |
| 122 | GO:0006816: calcium ion transport | 1.12E-02 |
| 123 | GO:0045037: protein import into chloroplast stroma | 1.23E-02 |
| 124 | GO:0010582: floral meristem determinacy | 1.23E-02 |
| 125 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.23E-02 |
| 126 | GO:0006006: glucose metabolic process | 1.34E-02 |
| 127 | GO:0030036: actin cytoskeleton organization | 1.34E-02 |
| 128 | GO:0050826: response to freezing | 1.34E-02 |
| 129 | GO:0010075: regulation of meristem growth | 1.34E-02 |
| 130 | GO:2000012: regulation of auxin polar transport | 1.34E-02 |
| 131 | GO:0009785: blue light signaling pathway | 1.34E-02 |
| 132 | GO:0042546: cell wall biogenesis | 1.39E-02 |
| 133 | GO:0010207: photosystem II assembly | 1.46E-02 |
| 134 | GO:0070588: calcium ion transmembrane transport | 1.59E-02 |
| 135 | GO:0016310: phosphorylation | 1.77E-02 |
| 136 | GO:0051017: actin filament bundle assembly | 1.85E-02 |
| 137 | GO:0009116: nucleoside metabolic process | 1.85E-02 |
| 138 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.85E-02 |
| 139 | GO:0043622: cortical microtubule organization | 1.98E-02 |
| 140 | GO:0006417: regulation of translation | 2.00E-02 |
| 141 | GO:0031408: oxylipin biosynthetic process | 2.12E-02 |
| 142 | GO:0080167: response to karrikin | 2.24E-02 |
| 143 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.26E-02 |
| 144 | GO:0006730: one-carbon metabolic process | 2.26E-02 |
| 145 | GO:0010082: regulation of root meristem growth | 2.40E-02 |
| 146 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.40E-02 |
| 147 | GO:0010091: trichome branching | 2.55E-02 |
| 148 | GO:0008284: positive regulation of cell proliferation | 2.70E-02 |
| 149 | GO:0006508: proteolysis | 2.81E-02 |
| 150 | GO:0008033: tRNA processing | 2.85E-02 |
| 151 | GO:0048653: anther development | 2.85E-02 |
| 152 | GO:0000226: microtubule cytoskeleton organization | 2.85E-02 |
| 153 | GO:0009646: response to absence of light | 3.17E-02 |
| 154 | GO:0008654: phospholipid biosynthetic process | 3.33E-02 |
| 155 | GO:0000302: response to reactive oxygen species | 3.50E-02 |
| 156 | GO:0032502: developmental process | 3.67E-02 |
| 157 | GO:0010583: response to cyclopentenone | 3.67E-02 |
| 158 | GO:0031047: gene silencing by RNA | 3.67E-02 |
| 159 | GO:0006810: transport | 4.43E-02 |
| 160 | GO:0009911: positive regulation of flower development | 4.55E-02 |
| 161 | GO:0009816: defense response to bacterium, incompatible interaction | 4.73E-02 |
| 162 | GO:0006974: cellular response to DNA damage stimulus | 4.91E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004590: orotidine-5'-phosphate decarboxylase activity | 0.00E+00 |
| 2 | GO:0003873: 6-phosphofructo-2-kinase activity | 0.00E+00 |
| 3 | GO:0033818: beta-ketoacyl-acyl-carrier-protein synthase III activity | 0.00E+00 |
| 4 | GO:0048039: ubiquinone binding | 0.00E+00 |
| 5 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 6 | GO:0004056: argininosuccinate lyase activity | 0.00E+00 |
| 7 | GO:0043783: oxidoreductase activity, oxidizing metal ions with flavin as acceptor | 0.00E+00 |
| 8 | GO:0004358: glutamate N-acetyltransferase activity | 0.00E+00 |
| 9 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 10 | GO:0004174: electron-transferring-flavoprotein dehydrogenase activity | 0.00E+00 |
| 11 | GO:0046428: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity | 0.00E+00 |
| 12 | GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity | 0.00E+00 |
| 13 | GO:0004588: orotate phosphoribosyltransferase activity | 0.00E+00 |
| 14 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 1.18E-04 |
| 15 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.47E-04 |
| 16 | GO:0046481: digalactosyldiacylglycerol synthase activity | 3.47E-04 |
| 17 | GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity | 3.47E-04 |
| 18 | GO:0050139: nicotinate-N-glucosyltransferase activity | 3.47E-04 |
| 19 | GO:0046480: galactolipid galactosyltransferase activity | 3.47E-04 |
| 20 | GO:0005227: calcium activated cation channel activity | 3.47E-04 |
| 21 | GO:0042834: peptidoglycan binding | 3.47E-04 |
| 22 | GO:0004813: alanine-tRNA ligase activity | 3.47E-04 |
| 23 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 3.47E-04 |
| 24 | GO:0008353: RNA polymerase II carboxy-terminal domain kinase activity | 4.61E-04 |
| 25 | GO:0000156: phosphorelay response regulator activity | 6.06E-04 |
| 26 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 7.56E-04 |
| 27 | GO:0050017: L-3-cyanoalanine synthase activity | 7.56E-04 |
| 28 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 7.56E-04 |
| 29 | GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity | 7.56E-04 |
| 30 | GO:0009973: adenylyl-sulfate reductase activity | 7.56E-04 |
| 31 | GO:0004805: trehalose-phosphatase activity | 7.61E-04 |
| 32 | GO:0004557: alpha-galactosidase activity | 1.22E-03 |
| 33 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 1.22E-03 |
| 34 | GO:0052692: raffinose alpha-galactosidase activity | 1.22E-03 |
| 35 | GO:0046524: sucrose-phosphate synthase activity | 1.22E-03 |
| 36 | GO:0070330: aromatase activity | 1.22E-03 |
| 37 | GO:0016301: kinase activity | 1.25E-03 |
| 38 | GO:0035250: UDP-galactosyltransferase activity | 1.76E-03 |
| 39 | GO:0035197: siRNA binding | 1.76E-03 |
| 40 | GO:0001872: (1->3)-beta-D-glucan binding | 1.76E-03 |
| 41 | GO:0004659: prenyltransferase activity | 2.37E-03 |
| 42 | GO:0001053: plastid sigma factor activity | 2.37E-03 |
| 43 | GO:0004345: glucose-6-phosphate dehydrogenase activity | 2.37E-03 |
| 44 | GO:0016987: sigma factor activity | 2.37E-03 |
| 45 | GO:0004674: protein serine/threonine kinase activity | 2.63E-03 |
| 46 | GO:0005275: amine transmembrane transporter activity | 3.03E-03 |
| 47 | GO:0018685: alkane 1-monooxygenase activity | 3.03E-03 |
| 48 | GO:0016208: AMP binding | 3.74E-03 |
| 49 | GO:0008519: ammonium transmembrane transporter activity | 3.74E-03 |
| 50 | GO:2001070: starch binding | 3.74E-03 |
| 51 | GO:0004605: phosphatidate cytidylyltransferase activity | 3.74E-03 |
| 52 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.74E-03 |
| 53 | GO:0030332: cyclin binding | 3.74E-03 |
| 54 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 4.31E-03 |
| 55 | GO:0003723: RNA binding | 4.42E-03 |
| 56 | GO:0003730: mRNA 3'-UTR binding | 4.50E-03 |
| 57 | GO:0004124: cysteine synthase activity | 4.50E-03 |
| 58 | GO:0008195: phosphatidate phosphatase activity | 4.50E-03 |
| 59 | GO:0003872: 6-phosphofructokinase activity | 5.32E-03 |
| 60 | GO:0016597: amino acid binding | 5.89E-03 |
| 61 | GO:0004672: protein kinase activity | 5.95E-03 |
| 62 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 7.35E-03 |
| 63 | GO:0004252: serine-type endopeptidase activity | 7.40E-03 |
| 64 | GO:0003747: translation release factor activity | 8.04E-03 |
| 65 | GO:0004693: cyclin-dependent protein serine/threonine kinase activity | 8.99E-03 |
| 66 | GO:0004713: protein tyrosine kinase activity | 1.01E-02 |
| 67 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 1.12E-02 |
| 68 | GO:0051539: 4 iron, 4 sulfur cluster binding | 1.18E-02 |
| 69 | GO:0000976: transcription regulatory region sequence-specific DNA binding | 1.23E-02 |
| 70 | GO:0004521: endoribonuclease activity | 1.23E-02 |
| 71 | GO:0000049: tRNA binding | 1.23E-02 |
| 72 | GO:0004089: carbonate dehydratase activity | 1.34E-02 |
| 73 | GO:0015095: magnesium ion transmembrane transporter activity | 1.34E-02 |
| 74 | GO:0005262: calcium channel activity | 1.34E-02 |
| 75 | GO:0019888: protein phosphatase regulator activity | 1.34E-02 |
| 76 | GO:0009982: pseudouridine synthase activity | 1.34E-02 |
| 77 | GO:0043621: protein self-association | 1.45E-02 |
| 78 | GO:0003714: transcription corepressor activity | 1.85E-02 |
| 79 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.98E-02 |
| 80 | GO:0004176: ATP-dependent peptidase activity | 2.12E-02 |
| 81 | GO:0033612: receptor serine/threonine kinase binding | 2.12E-02 |
| 82 | GO:0003964: RNA-directed DNA polymerase activity | 2.12E-02 |
| 83 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.12E-02 |
| 84 | GO:0022891: substrate-specific transmembrane transporter activity | 2.40E-02 |
| 85 | GO:0030570: pectate lyase activity | 2.40E-02 |
| 86 | GO:0003727: single-stranded RNA binding | 2.55E-02 |
| 87 | GO:0042803: protein homodimerization activity | 2.97E-02 |
| 88 | GO:0004871: signal transducer activity | 2.97E-02 |
| 89 | GO:0008536: Ran GTPase binding | 3.01E-02 |
| 90 | GO:0010181: FMN binding | 3.17E-02 |
| 91 | GO:0016829: lyase activity | 3.48E-02 |
| 92 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.84E-02 |
| 93 | GO:0051015: actin filament binding | 3.84E-02 |
| 94 | GO:0016791: phosphatase activity | 4.01E-02 |
| 95 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.14E-02 |
| 96 | GO:0008237: metallopeptidase activity | 4.19E-02 |
| 97 | GO:0005200: structural constituent of cytoskeleton | 4.19E-02 |
| 98 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.19E-02 |
| 99 | GO:0008017: microtubule binding | 4.64E-02 |