GO Enrichment Analysis of Co-expressed Genes with
AT4G31310
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042821: pyridoxal biosynthetic process | 0.00E+00 |
| 2 | GO:0015882: L-ascorbic acid transport | 0.00E+00 |
| 3 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 4 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 5 | GO:0042820: vitamin B6 catabolic process | 0.00E+00 |
| 6 | GO:1903508: positive regulation of nucleic acid-templated transcription | 0.00E+00 |
| 7 | GO:0033494: ferulate metabolic process | 0.00E+00 |
| 8 | GO:0006021: inositol biosynthetic process | 4.76E-05 |
| 9 | GO:0010190: cytochrome b6f complex assembly | 1.10E-04 |
| 10 | GO:0009443: pyridoxal 5'-phosphate salvage | 2.65E-04 |
| 11 | GO:0031426: polycistronic mRNA processing | 2.65E-04 |
| 12 | GO:0071028: nuclear mRNA surveillance | 2.65E-04 |
| 13 | GO:0043266: regulation of potassium ion transport | 2.65E-04 |
| 14 | GO:0006659: phosphatidylserine biosynthetic process | 2.65E-04 |
| 15 | GO:0043686: co-translational protein modification | 2.65E-04 |
| 16 | GO:2000021: regulation of ion homeostasis | 2.65E-04 |
| 17 | GO:1902458: positive regulation of stomatal opening | 2.65E-04 |
| 18 | GO:0010028: xanthophyll cycle | 2.65E-04 |
| 19 | GO:1900865: chloroplast RNA modification | 4.44E-04 |
| 20 | GO:1900871: chloroplast mRNA modification | 5.83E-04 |
| 21 | GO:0030187: melatonin biosynthetic process | 5.83E-04 |
| 22 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 5.83E-04 |
| 23 | GO:0031125: rRNA 3'-end processing | 5.83E-04 |
| 24 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 5.83E-04 |
| 25 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 5.83E-04 |
| 26 | GO:0034475: U4 snRNA 3'-end processing | 5.83E-04 |
| 27 | GO:0016024: CDP-diacylglycerol biosynthetic process | 6.85E-04 |
| 28 | GO:0010207: photosystem II assembly | 8.73E-04 |
| 29 | GO:0010143: cutin biosynthetic process | 8.73E-04 |
| 30 | GO:0009405: pathogenesis | 9.47E-04 |
| 31 | GO:0006753: nucleoside phosphate metabolic process | 9.47E-04 |
| 32 | GO:0010589: leaf proximal/distal pattern formation | 9.47E-04 |
| 33 | GO:0080055: low-affinity nitrate transport | 9.47E-04 |
| 34 | GO:0051604: protein maturation | 9.47E-04 |
| 35 | GO:0045493: xylan catabolic process | 9.47E-04 |
| 36 | GO:0016075: rRNA catabolic process | 9.47E-04 |
| 37 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 9.47E-04 |
| 38 | GO:0006164: purine nucleotide biosynthetic process | 1.35E-03 |
| 39 | GO:0046739: transport of virus in multicellular host | 1.35E-03 |
| 40 | GO:0006168: adenine salvage | 1.35E-03 |
| 41 | GO:0006166: purine ribonucleoside salvage | 1.35E-03 |
| 42 | GO:0010239: chloroplast mRNA processing | 1.35E-03 |
| 43 | GO:0008295: spermidine biosynthetic process | 1.81E-03 |
| 44 | GO:2000306: positive regulation of photomorphogenesis | 1.81E-03 |
| 45 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.81E-03 |
| 46 | GO:0045038: protein import into chloroplast thylakoid membrane | 2.31E-03 |
| 47 | GO:0031365: N-terminal protein amino acid modification | 2.31E-03 |
| 48 | GO:1902183: regulation of shoot apical meristem development | 2.31E-03 |
| 49 | GO:0044209: AMP salvage | 2.31E-03 |
| 50 | GO:0010158: abaxial cell fate specification | 2.31E-03 |
| 51 | GO:0009791: post-embryonic development | 2.71E-03 |
| 52 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.85E-03 |
| 53 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.85E-03 |
| 54 | GO:0046855: inositol phosphate dephosphorylation | 2.85E-03 |
| 55 | GO:0010405: arabinogalactan protein metabolic process | 2.85E-03 |
| 56 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 2.85E-03 |
| 57 | GO:0016554: cytidine to uridine editing | 2.85E-03 |
| 58 | GO:0045962: positive regulation of development, heterochronic | 2.85E-03 |
| 59 | GO:0016032: viral process | 3.10E-03 |
| 60 | GO:0042372: phylloquinone biosynthetic process | 3.43E-03 |
| 61 | GO:0048280: vesicle fusion with Golgi apparatus | 3.43E-03 |
| 62 | GO:0015937: coenzyme A biosynthetic process | 4.04E-03 |
| 63 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 4.04E-03 |
| 64 | GO:0010027: thylakoid membrane organization | 4.19E-03 |
| 65 | GO:0010078: maintenance of root meristem identity | 4.69E-03 |
| 66 | GO:0009704: de-etiolation | 4.69E-03 |
| 67 | GO:2000070: regulation of response to water deprivation | 4.69E-03 |
| 68 | GO:0016559: peroxisome fission | 4.69E-03 |
| 69 | GO:0007186: G-protein coupled receptor signaling pathway | 5.37E-03 |
| 70 | GO:0043562: cellular response to nitrogen levels | 5.37E-03 |
| 71 | GO:0015996: chlorophyll catabolic process | 5.37E-03 |
| 72 | GO:0006811: ion transport | 6.03E-03 |
| 73 | GO:0048507: meristem development | 6.09E-03 |
| 74 | GO:0010206: photosystem II repair | 6.09E-03 |
| 75 | GO:2000024: regulation of leaf development | 6.09E-03 |
| 76 | GO:0006189: 'de novo' IMP biosynthetic process | 6.09E-03 |
| 77 | GO:0098656: anion transmembrane transport | 6.09E-03 |
| 78 | GO:0010267: production of ta-siRNAs involved in RNA interference | 6.83E-03 |
| 79 | GO:0010018: far-red light signaling pathway | 6.83E-03 |
| 80 | GO:0006896: Golgi to vacuole transport | 7.61E-03 |
| 81 | GO:0043069: negative regulation of programmed cell death | 7.61E-03 |
| 82 | GO:0045036: protein targeting to chloroplast | 7.61E-03 |
| 83 | GO:1903507: negative regulation of nucleic acid-templated transcription | 8.42E-03 |
| 84 | GO:0009684: indoleacetic acid biosynthetic process | 8.42E-03 |
| 85 | GO:0000038: very long-chain fatty acid metabolic process | 8.42E-03 |
| 86 | GO:0045037: protein import into chloroplast stroma | 9.26E-03 |
| 87 | GO:0006790: sulfur compound metabolic process | 9.26E-03 |
| 88 | GO:0030048: actin filament-based movement | 1.01E-02 |
| 89 | GO:0030036: actin cytoskeleton organization | 1.01E-02 |
| 90 | GO:0009767: photosynthetic electron transport chain | 1.01E-02 |
| 91 | GO:0010588: cotyledon vascular tissue pattern formation | 1.01E-02 |
| 92 | GO:0010020: chloroplast fission | 1.10E-02 |
| 93 | GO:0048467: gynoecium development | 1.10E-02 |
| 94 | GO:0019853: L-ascorbic acid biosynthetic process | 1.20E-02 |
| 95 | GO:0090351: seedling development | 1.20E-02 |
| 96 | GO:0010030: positive regulation of seed germination | 1.20E-02 |
| 97 | GO:0046854: phosphatidylinositol phosphorylation | 1.20E-02 |
| 98 | GO:0009585: red, far-red light phototransduction | 1.21E-02 |
| 99 | GO:0042753: positive regulation of circadian rhythm | 1.29E-02 |
| 100 | GO:0000027: ribosomal large subunit assembly | 1.39E-02 |
| 101 | GO:0007010: cytoskeleton organization | 1.39E-02 |
| 102 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.39E-02 |
| 103 | GO:0080147: root hair cell development | 1.39E-02 |
| 104 | GO:0007017: microtubule-based process | 1.49E-02 |
| 105 | GO:0035428: hexose transmembrane transport | 1.70E-02 |
| 106 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.70E-02 |
| 107 | GO:0019722: calcium-mediated signaling | 1.92E-02 |
| 108 | GO:0055114: oxidation-reduction process | 2.00E-02 |
| 109 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.03E-02 |
| 110 | GO:0042147: retrograde transport, endosome to Golgi | 2.03E-02 |
| 111 | GO:0080022: primary root development | 2.15E-02 |
| 112 | GO:0010087: phloem or xylem histogenesis | 2.15E-02 |
| 113 | GO:0042631: cellular response to water deprivation | 2.15E-02 |
| 114 | GO:0045489: pectin biosynthetic process | 2.26E-02 |
| 115 | GO:0010154: fruit development | 2.26E-02 |
| 116 | GO:0009958: positive gravitropism | 2.26E-02 |
| 117 | GO:0010305: leaf vascular tissue pattern formation | 2.26E-02 |
| 118 | GO:0010182: sugar mediated signaling pathway | 2.26E-02 |
| 119 | GO:0046323: glucose import | 2.26E-02 |
| 120 | GO:0010183: pollen tube guidance | 2.51E-02 |
| 121 | GO:0048825: cotyledon development | 2.51E-02 |
| 122 | GO:0008654: phospholipid biosynthetic process | 2.51E-02 |
| 123 | GO:0009851: auxin biosynthetic process | 2.51E-02 |
| 124 | GO:0006623: protein targeting to vacuole | 2.51E-02 |
| 125 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.63E-02 |
| 126 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.63E-02 |
| 127 | GO:0010583: response to cyclopentenone | 2.76E-02 |
| 128 | GO:1901657: glycosyl compound metabolic process | 2.88E-02 |
| 129 | GO:0030163: protein catabolic process | 2.88E-02 |
| 130 | GO:0009639: response to red or far red light | 3.02E-02 |
| 131 | GO:0006464: cellular protein modification process | 3.02E-02 |
| 132 | GO:0007267: cell-cell signaling | 3.15E-02 |
| 133 | GO:0016126: sterol biosynthetic process | 3.42E-02 |
| 134 | GO:0009607: response to biotic stimulus | 3.56E-02 |
| 135 | GO:0009627: systemic acquired resistance | 3.70E-02 |
| 136 | GO:0006888: ER to Golgi vesicle-mediated transport | 3.84E-02 |
| 137 | GO:0010411: xyloglucan metabolic process | 3.84E-02 |
| 138 | GO:0016311: dephosphorylation | 3.98E-02 |
| 139 | GO:0006499: N-terminal protein myristoylation | 4.43E-02 |
| 140 | GO:0009416: response to light stimulus | 4.49E-02 |
| 141 | GO:0048527: lateral root development | 4.58E-02 |
| 142 | GO:0007568: aging | 4.58E-02 |
| 143 | GO:0009793: embryo development ending in seed dormancy | 4.83E-02 |
| 144 | GO:0009637: response to blue light | 4.88E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 2 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 3 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 4 | GO:0015229: L-ascorbic acid transporter activity | 0.00E+00 |
| 5 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 6 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 7 | GO:0036033: mediator complex binding | 0.00E+00 |
| 8 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 9 | GO:0004059: aralkylamine N-acetyltransferase activity | 0.00E+00 |
| 10 | GO:0050236: pyridoxine:NADP 4-dehydrogenase activity | 0.00E+00 |
| 11 | GO:0000293: ferric-chelate reductase activity | 1.10E-04 |
| 12 | GO:0010945: CoA pyrophosphatase activity | 2.65E-04 |
| 13 | GO:0042586: peptide deformylase activity | 2.65E-04 |
| 14 | GO:0009496: plastoquinol--plastocyanin reductase activity | 2.65E-04 |
| 15 | GO:0004328: formamidase activity | 2.65E-04 |
| 16 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.65E-04 |
| 17 | GO:0080132: fatty acid alpha-hydroxylase activity | 2.65E-04 |
| 18 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.83E-04 |
| 19 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.83E-04 |
| 20 | GO:0015929: hexosaminidase activity | 5.83E-04 |
| 21 | GO:0004563: beta-N-acetylhexosaminidase activity | 5.83E-04 |
| 22 | GO:0004512: inositol-3-phosphate synthase activity | 5.83E-04 |
| 23 | GO:0048531: beta-1,3-galactosyltransferase activity | 5.83E-04 |
| 24 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 5.83E-04 |
| 25 | GO:0017118: lipoyltransferase activity | 5.83E-04 |
| 26 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 5.83E-04 |
| 27 | GO:0004766: spermidine synthase activity | 5.83E-04 |
| 28 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.83E-04 |
| 29 | GO:0003913: DNA photolyase activity | 9.47E-04 |
| 30 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.47E-04 |
| 31 | GO:0070402: NADPH binding | 9.47E-04 |
| 32 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 9.47E-04 |
| 33 | GO:0050734: hydroxycinnamoyltransferase activity | 9.47E-04 |
| 34 | GO:0005528: FK506 binding | 1.20E-03 |
| 35 | GO:0016851: magnesium chelatase activity | 1.35E-03 |
| 36 | GO:0003999: adenine phosphoribosyltransferase activity | 1.35E-03 |
| 37 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.35E-03 |
| 38 | GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.35E-03 |
| 39 | GO:0035198: miRNA binding | 1.35E-03 |
| 40 | GO:0000254: C-4 methylsterol oxidase activity | 1.35E-03 |
| 41 | GO:0048027: mRNA 5'-UTR binding | 1.35E-03 |
| 42 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.81E-03 |
| 43 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 1.81E-03 |
| 44 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.81E-03 |
| 45 | GO:0016846: carbon-sulfur lyase activity | 2.31E-03 |
| 46 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 2.85E-03 |
| 47 | GO:0042578: phosphoric ester hydrolase activity | 2.85E-03 |
| 48 | GO:0000210: NAD+ diphosphatase activity | 2.85E-03 |
| 49 | GO:0016208: AMP binding | 2.85E-03 |
| 50 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 2.85E-03 |
| 51 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.85E-03 |
| 52 | GO:0016832: aldehyde-lyase activity | 3.43E-03 |
| 53 | GO:0009927: histidine phosphotransfer kinase activity | 3.43E-03 |
| 54 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.43E-03 |
| 55 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.43E-03 |
| 56 | GO:0004033: aldo-keto reductase (NADP) activity | 4.69E-03 |
| 57 | GO:0043022: ribosome binding | 4.69E-03 |
| 58 | GO:0008236: serine-type peptidase activity | 5.20E-03 |
| 59 | GO:0016491: oxidoreductase activity | 6.21E-03 |
| 60 | GO:0008017: microtubule binding | 6.23E-03 |
| 61 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 6.32E-03 |
| 62 | GO:0003993: acid phosphatase activity | 7.24E-03 |
| 63 | GO:0047372: acylglycerol lipase activity | 8.42E-03 |
| 64 | GO:0003725: double-stranded RNA binding | 1.01E-02 |
| 65 | GO:0008081: phosphoric diester hydrolase activity | 1.01E-02 |
| 66 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.01E-02 |
| 67 | GO:0005315: inorganic phosphate transmembrane transporter activity | 1.01E-02 |
| 68 | GO:0031072: heat shock protein binding | 1.01E-02 |
| 69 | GO:0000175: 3'-5'-exoribonuclease activity | 1.01E-02 |
| 70 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.04E-02 |
| 71 | GO:0008131: primary amine oxidase activity | 1.10E-02 |
| 72 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.10E-02 |
| 73 | GO:0003774: motor activity | 1.10E-02 |
| 74 | GO:0005506: iron ion binding | 1.15E-02 |
| 75 | GO:0008146: sulfotransferase activity | 1.20E-02 |
| 76 | GO:0050660: flavin adenine dinucleotide binding | 1.23E-02 |
| 77 | GO:0003777: microtubule motor activity | 1.34E-02 |
| 78 | GO:0003714: transcription corepressor activity | 1.39E-02 |
| 79 | GO:0003824: catalytic activity | 1.39E-02 |
| 80 | GO:0052689: carboxylic ester hydrolase activity | 1.53E-02 |
| 81 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.59E-02 |
| 82 | GO:0008408: 3'-5' exonuclease activity | 1.59E-02 |
| 83 | GO:0016746: transferase activity, transferring acyl groups | 1.78E-02 |
| 84 | GO:0008514: organic anion transmembrane transporter activity | 1.92E-02 |
| 85 | GO:0008080: N-acetyltransferase activity | 2.26E-02 |
| 86 | GO:0005355: glucose transmembrane transporter activity | 2.38E-02 |
| 87 | GO:0016791: phosphatase activity | 3.02E-02 |
| 88 | GO:0005200: structural constituent of cytoskeleton | 3.15E-02 |
| 89 | GO:0004721: phosphoprotein phosphatase activity | 3.84E-02 |
| 90 | GO:0102483: scopolin beta-glucosidase activity | 3.84E-02 |
| 91 | GO:0050897: cobalt ion binding | 4.58E-02 |
| 92 | GO:0016788: hydrolase activity, acting on ester bonds | 4.68E-02 |