co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G31290

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0090706: specification of plant organ position	0.00E+00
2	GO:2000121: regulation of removal of superoxide radicals	0.00E+00
3	GO:1902183: regulation of shoot apical meristem development	3.83E-06
4	GO:0010158: abaxial cell fate specification	3.83E-06
5	GO:2000024: regulation of leaf development	2.58E-05
6	GO:0010450: inflorescence meristem growth	4.45E-05
7	GO:0051171: regulation of nitrogen compound metabolic process	4.45E-05
8	GO:0009944: polarity specification of adaxial/abaxial axis	1.05E-04
9	GO:0045165: cell fate commitment	1.89E-04
10	GO:0010154: fruit development	2.22E-04
11	GO:0009647: skotomorphogenesis	2.78E-04
12	GO:0010255: glucose mediated signaling pathway	2.78E-04
13	GO:0009963: positive regulation of flavonoid biosynthetic process	2.78E-04
14	GO:0009649: entrainment of circadian clock	3.73E-04
15	GO:0032366: intracellular sterol transport	3.73E-04
16	GO:0048573: photoperiodism, flowering	4.68E-04
17	GO:0046283: anthocyanin-containing compound metabolic process	4.75E-04
18	GO:0045038: protein import into chloroplast thylakoid membrane	4.75E-04
19	GO:0006665: sphingolipid metabolic process	4.75E-04
20	GO:0034052: positive regulation of plant-type hypersensitive response	4.75E-04
21	GO:0000741: karyogamy	5.82E-04
22	GO:0048280: vesicle fusion with Golgi apparatus	6.94E-04
23	GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity	6.94E-04
24	GO:0009648: photoperiodism	6.94E-04
25	GO:0043068: positive regulation of programmed cell death	9.32E-04
26	GO:0006629: lipid metabolic process	1.01E-03
27	GO:0010093: specification of floral organ identity	1.06E-03
28	GO:0010380: regulation of chlorophyll biosynthetic process	1.32E-03
29	GO:0009641: shade avoidance	1.47E-03
30	GO:0006896: Golgi to vacuole transport	1.47E-03
31	GO:0006541: glutamine metabolic process	2.09E-03
32	GO:0009933: meristem structural organization	2.09E-03
33	GO:0042753: positive regulation of circadian rhythm	2.42E-03
34	GO:0000162: tryptophan biosynthetic process	2.42E-03
35	GO:0010187: negative regulation of seed germination	2.60E-03
36	GO:0048511: rhythmic process	2.96E-03
37	GO:0019915: lipid storage	2.96E-03
38	GO:0009814: defense response, incompatible interaction	3.14E-03
39	GO:0071215: cellular response to abscisic acid stimulus	3.33E-03
40	GO:0042147: retrograde transport, endosome to Golgi	3.73E-03
41	GO:0010197: polar nucleus fusion	4.14E-03
42	GO:0009741: response to brassinosteroid	4.14E-03
43	GO:0007018: microtubule-based movement	4.35E-03
44	GO:0006623: protein targeting to vacuole	4.56E-03
45	GO:0006891: intra-Golgi vesicle-mediated transport	4.77E-03
46	GO:0010583: response to cyclopentenone	4.99E-03
47	GO:0016125: sterol metabolic process	5.45E-03
48	GO:0006888: ER to Golgi vesicle-mediated transport	6.89E-03
49	GO:0048527: lateral root development	8.18E-03
50	GO:0010119: regulation of stomatal movement	8.18E-03
51	GO:0009910: negative regulation of flower development	8.18E-03
52	GO:0051707: response to other organism	1.04E-02
53	GO:0009640: photomorphogenesis	1.04E-02
54	GO:0009644: response to high light intensity	1.10E-02
55	GO:0009585: red, far-red light phototransduction	1.28E-02
56	GO:0010224: response to UV-B	1.32E-02
57	GO:0009909: regulation of flower development	1.38E-02
58	GO:0048367: shoot system development	1.48E-02
59	GO:0009626: plant-type hypersensitive response	1.51E-02
60	GO:0009740: gibberellic acid mediated signaling pathway	1.58E-02
61	GO:0051726: regulation of cell cycle	1.72E-02
62	GO:0009742: brassinosteroid mediated signaling pathway	1.72E-02
63	GO:0016567: protein ubiquitination	2.07E-02
64	GO:0042744: hydrogen peroxide catabolic process	2.12E-02
65	GO:0007623: circadian rhythm	2.43E-02
66	GO:0009617: response to bacterium	2.76E-02
67	GO:0010468: regulation of gene expression	2.76E-02
68	GO:0030154: cell differentiation	2.90E-02
69	GO:0007049: cell cycle	3.59E-02

Rank	GO Term	Adjusted P value
1	GO:0019210: kinase inhibitor activity	4.45E-05
2	GO:0004328: formamidase activity	4.45E-05
3	GO:0004049: anthranilate synthase activity	1.89E-04
4	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	2.78E-04
5	GO:0070696: transmembrane receptor protein serine/threonine kinase binding	4.75E-04
6	GO:0047372: acylglycerol lipase activity	1.61E-03
7	GO:0008081: phosphoric diester hydrolase activity	1.92E-03
8	GO:0008146: sulfotransferase activity	2.25E-03
9	GO:0042802: identical protein binding	3.33E-03
10	GO:0001085: RNA polymerase II transcription factor binding	4.14E-03
11	GO:0019901: protein kinase binding	4.56E-03
12	GO:0016722: oxidoreductase activity, oxidizing metal ions	5.68E-03
13	GO:0004842: ubiquitin-protein transferase activity	7.62E-03
14	GO:0004693: cyclin-dependent protein serine/threonine kinase activity	7.91E-03
15	GO:0030145: manganese ion binding	8.18E-03
16	GO:0001228: transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding	8.18E-03
17	GO:0000149: SNARE binding	9.27E-03
18	GO:0005484: SNAP receptor activity	1.04E-02
19	GO:0035091: phosphatidylinositol binding	1.10E-02
20	GO:0003777: microtubule motor activity	1.38E-02
21	GO:0031625: ubiquitin protein ligase binding	1.38E-02
22	GO:0045735: nutrient reservoir activity	1.45E-02
23	GO:0030599: pectinesterase activity	1.58E-02
24	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.97E-02
25	GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding	2.12E-02
26	GO:0008565: protein transporter activity	2.20E-02
27	GO:0008017: microtubule binding	2.51E-02
28	GO:0004601: peroxidase activity	3.32E-02
29	GO:0003682: chromatin binding	3.45E-02
30	GO:0016491: oxidoreductase activity	3.50E-02
31	GO:0004497: monooxygenase activity	3.87E-02
32	GO:0004672: protein kinase activity	3.90E-02
33	GO:0061630: ubiquitin protein ligase activity	4.01E-02
34	GO:0020037: heme binding	4.19E-02