co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G31040

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0006429: leucyl-tRNA aminoacylation	0.00E+00
2	GO:0043488: regulation of mRNA stability	0.00E+00
3	GO:0007037: vacuolar phosphate transport	0.00E+00
4	GO:0006428: isoleucyl-tRNA aminoacylation	0.00E+00
5	GO:0031116: positive regulation of microtubule polymerization	0.00E+00
6	GO:0009395: phospholipid catabolic process	8.59E-05
7	GO:0000476: maturation of 4.5S rRNA	1.54E-04
8	GO:0000967: rRNA 5'-end processing	1.54E-04
9	GO:0042547: cell wall modification involved in multidimensional cell growth	1.54E-04
10	GO:0015801: aromatic amino acid transport	1.54E-04
11	GO:1902458: positive regulation of stomatal opening	1.54E-04
12	GO:0009627: systemic acquired resistance	2.09E-04
13	GO:0006415: translational termination	2.81E-04
14	GO:0015804: neutral amino acid transport	3.51E-04
15	GO:0034470: ncRNA processing	3.51E-04
16	GO:0034755: iron ion transmembrane transport	3.51E-04
17	GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole	3.51E-04
18	GO:0010115: regulation of abscisic acid biosynthetic process	3.51E-04
19	GO:0006432: phenylalanyl-tRNA aminoacylation	3.51E-04
20	GO:0007154: cell communication	3.51E-04
21	GO:1900033: negative regulation of trichome patterning	3.51E-04
22	GO:1903426: regulation of reactive oxygen species biosynthetic process	3.51E-04
23	GO:0001578: microtubule bundle formation	5.75E-04
24	GO:0045493: xylan catabolic process	5.75E-04
25	GO:0006418: tRNA aminoacylation for protein translation	6.32E-04
26	GO:0003333: amino acid transmembrane transport	6.92E-04
27	GO:0043433: negative regulation of sequence-specific DNA binding transcription factor activity	8.23E-04
28	GO:0006168: adenine salvage	8.23E-04
29	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	8.23E-04
30	GO:0006166: purine ribonucleoside salvage	8.23E-04
31	GO:0051322: anaphase	1.09E-03
32	GO:0009765: photosynthesis, light harvesting	1.09E-03
33	GO:0022622: root system development	1.09E-03
34	GO:0007020: microtubule nucleation	1.09E-03
35	GO:0048629: trichome patterning	1.09E-03
36	GO:0016123: xanthophyll biosynthetic process	1.38E-03
37	GO:0044209: AMP salvage	1.38E-03
38	GO:0006465: signal peptide processing	1.38E-03
39	GO:0016120: carotene biosynthetic process	1.38E-03
40	GO:0046785: microtubule polymerization	1.38E-03
41	GO:0032543: mitochondrial translation	1.38E-03
42	GO:0045038: protein import into chloroplast thylakoid membrane	1.38E-03
43	GO:0016554: cytidine to uridine editing	1.70E-03
44	GO:0009955: adaxial/abaxial pattern specification	2.03E-03
45	GO:1901259: chloroplast rRNA processing	2.03E-03
46	GO:0048528: post-embryonic root development	2.39E-03
47	GO:0032880: regulation of protein localization	2.39E-03
48	GO:0042255: ribosome assembly	2.77E-03
49	GO:0006353: DNA-templated transcription, termination	2.77E-03
50	GO:2000070: regulation of response to water deprivation	2.77E-03
51	GO:0052543: callose deposition in cell wall	2.77E-03
52	GO:0006865: amino acid transport	3.07E-03
53	GO:0022900: electron transport chain	3.16E-03
54	GO:0009657: plastid organization	3.16E-03
55	GO:0032544: plastid translation	3.16E-03
56	GO:0009821: alkaloid biosynthetic process	3.58E-03
57	GO:0009658: chloroplast organization	3.83E-03
58	GO:1900865: chloroplast RNA modification	4.01E-03
59	GO:0005982: starch metabolic process	4.01E-03
60	GO:0006949: syncytium formation	4.46E-03
61	GO:0009684: indoleacetic acid biosynthetic process	4.92E-03
62	GO:0019684: photosynthesis, light reaction	4.92E-03
63	GO:0009089: lysine biosynthetic process via diaminopimelate	4.92E-03
64	GO:0006879: cellular iron ion homeostasis	4.92E-03
65	GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway	5.25E-03
66	GO:2000012: regulation of auxin polar transport	5.91E-03
67	GO:0009725: response to hormone	5.91E-03
68	GO:0010143: cutin biosynthetic process	6.42E-03
69	GO:0006541: glutamine metabolic process	6.42E-03
70	GO:0071732: cellular response to nitric oxide	6.95E-03
71	GO:0000162: tryptophan biosynthetic process	7.49E-03
72	GO:0006833: water transport	7.49E-03
73	GO:0016042: lipid catabolic process	7.96E-03
74	GO:0007010: cytoskeleton organization	8.05E-03
75	GO:0043622: cortical microtubule organization	8.63E-03
76	GO:0061077: chaperone-mediated protein folding	9.22E-03
77	GO:0016998: cell wall macromolecule catabolic process	9.22E-03
78	GO:0048511: rhythmic process	9.22E-03
79	GO:0009814: defense response, incompatible interaction	9.82E-03
80	GO:0031348: negative regulation of defense response	9.82E-03
81	GO:0009831: plant-type cell wall modification involved in multidimensional cell growth	1.04E-02
82	GO:0071369: cellular response to ethylene stimulus	1.04E-02
83	GO:0009306: protein secretion	1.11E-02
84	GO:0016117: carotenoid biosynthetic process	1.17E-02
85	GO:0009789: positive regulation of abscisic acid-activated signaling pathway	1.17E-02
86	GO:0008284: positive regulation of cell proliferation	1.17E-02
87	GO:0000271: polysaccharide biosynthetic process	1.24E-02
88	GO:0008033: tRNA processing	1.24E-02
89	GO:0034220: ion transmembrane transport	1.24E-02
90	GO:0006413: translational initiation	1.28E-02
91	GO:0045489: pectin biosynthetic process	1.31E-02
92	GO:0009958: positive gravitropism	1.31E-02
93	GO:0045490: pectin catabolic process	1.37E-02
94	GO:0042752: regulation of circadian rhythm	1.37E-02
95	GO:0007166: cell surface receptor signaling pathway	1.57E-02
96	GO:0016032: viral process	1.59E-02
97	GO:0032502: developmental process	1.59E-02
98	GO:0008380: RNA splicing	1.64E-02
99	GO:0071281: cellular response to iron ion	1.66E-02
100	GO:0009828: plant-type cell wall loosening	1.74E-02
101	GO:0000910: cytokinesis	1.89E-02
102	GO:0006810: transport	2.05E-02
103	GO:0010411: xyloglucan metabolic process	2.21E-02
104	GO:0055085: transmembrane transport	2.31E-02
105	GO:0048481: plant ovule development	2.38E-02
106	GO:0048527: lateral root development	2.64E-02
107	GO:0045087: innate immune response	2.81E-02
108	GO:0016051: carbohydrate biosynthetic process	2.81E-02
109	GO:0006839: mitochondrial transport	3.09E-02
110	GO:0008283: cell proliferation	3.37E-02
111	GO:0009744: response to sucrose	3.37E-02
112	GO:0006855: drug transmembrane transport	3.76E-02
113	GO:0009664: plant-type cell wall organization	3.96E-02
114	GO:0071555: cell wall organization	4.12E-02
115	GO:0009585: red, far-red light phototransduction	4.17E-02
116	GO:0051603: proteolysis involved in cellular protein catabolic process	4.27E-02

Rank	GO Term	Adjusted P value
1	GO:0045435: lycopene epsilon cyclase activity	0.00E+00
2	GO:0004822: isoleucine-tRNA ligase activity	0.00E+00
3	GO:0061634: alpha-D-xyloside xylohydrolase	0.00E+00
4	GO:0043864: indoleacetamide hydrolase activity	0.00E+00
5	GO:0080176: xyloglucan 1,6-alpha-xylosidase activity	0.00E+00
6	GO:0004823: leucine-tRNA ligase activity	0.00E+00
7	GO:0002161: aminoacyl-tRNA editing activity	4.34E-06
8	GO:0016788: hydrolase activity, acting on ester bonds	8.92E-06
9	GO:0003747: translation release factor activity	1.70E-04
10	GO:0000049: tRNA binding	3.23E-04
11	GO:0009977: proton motive force dependent protein transmembrane transporter activity	3.51E-04
12	GO:0015173: aromatic amino acid transmembrane transporter activity	3.51E-04
13	GO:0004826: phenylalanine-tRNA ligase activity	3.51E-04
14	GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase	3.51E-04
15	GO:0015172: acidic amino acid transmembrane transporter activity	3.51E-04
16	GO:0005528: FK506 binding	5.74E-04
17	GO:0004180: carboxypeptidase activity	5.75E-04
18	GO:0004049: anthranilate synthase activity	5.75E-04
19	GO:0001872: (1->3)-beta-D-glucan binding	8.23E-04
20	GO:0015175: neutral amino acid transmembrane transporter activity	8.23E-04
21	GO:0030570: pectate lyase activity	8.23E-04
22	GO:0003999: adenine phosphoribosyltransferase activity	8.23E-04
23	GO:0016149: translation release factor activity, codon specific	8.23E-04
24	GO:0004812: aminoacyl-tRNA ligase activity	9.61E-04
25	GO:0004045: aminoacyl-tRNA hydrolase activity	1.09E-03
26	GO:0016810: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	1.09E-03
27	GO:0009044: xylan 1,4-beta-xylosidase activity	1.09E-03
28	GO:0046556: alpha-L-arabinofuranosidase activity	1.09E-03
29	GO:0004040: amidase activity	1.38E-03
30	GO:0005275: amine transmembrane transporter activity	1.38E-03
31	GO:0042578: phosphoric ester hydrolase activity	1.70E-03
32	GO:2001070: starch binding	1.70E-03
33	GO:0003730: mRNA 3'-UTR binding	2.03E-03
34	GO:0030247: polysaccharide binding	2.30E-03
35	GO:0004222: metalloendopeptidase activity	2.80E-03
36	GO:0003993: acid phosphatase activity	3.36E-03
37	GO:0005381: iron ion transmembrane transporter activity	4.01E-03
38	GO:0016844: strictosidine synthase activity	4.01E-03
39	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	4.82E-03
40	GO:0047372: acylglycerol lipase activity	4.92E-03
41	GO:0052689: carboxylic ester hydrolase activity	5.72E-03
42	GO:0008083: growth factor activity	6.42E-03
43	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	6.42E-03
44	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	9.82E-03
45	GO:0019843: rRNA binding	9.92E-03
46	GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	1.02E-02
47	GO:0016829: lyase activity	1.07E-02
48	GO:0003727: single-stranded RNA binding	1.11E-02
49	GO:0004675: transmembrane receptor protein serine/threonine kinase activity	1.28E-02
50	GO:0004872: receptor activity	1.44E-02
51	GO:0008017: microtubule binding	1.44E-02
52	GO:0003743: translation initiation factor activity	1.60E-02
53	GO:0015250: water channel activity	1.97E-02
54	GO:0000982: transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding	2.29E-02
55	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.29E-02
56	GO:0008236: serine-type peptidase activity	2.29E-02
57	GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds	2.43E-02
58	GO:0015238: drug transmembrane transporter activity	2.46E-02
59	GO:0016614: oxidoreductase activity, acting on CH-OH group of donors	2.64E-02
60	GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	2.81E-02
61	GO:0000987: core promoter proximal region sequence-specific DNA binding	2.90E-02
62	GO:0005525: GTP binding	3.19E-02
63	GO:0004185: serine-type carboxypeptidase activity	3.37E-02
64	GO:0051537: 2 iron, 2 sulfur cluster binding	3.56E-02
65	GO:0016787: hydrolase activity	3.58E-02
66	GO:0015293: symporter activity	3.66E-02
67	GO:0004519: endonuclease activity	4.22E-02
68	GO:0003690: double-stranded DNA binding	4.27E-02
69	GO:0015171: amino acid transmembrane transporter activity	4.48E-02
70	GO:0005215: transporter activity	4.66E-02