GO Enrichment Analysis of Co-expressed Genes with
AT4G30710
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042794: rRNA transcription from plastid promoter | 0.00E+00 |
| 2 | GO:0033473: indoleacetic acid conjugate metabolic process | 0.00E+00 |
| 3 | GO:0042793: transcription from plastid promoter | 8.71E-07 |
| 4 | GO:0006955: immune response | 1.81E-06 |
| 5 | GO:1903866: palisade mesophyll development | 1.39E-05 |
| 6 | GO:0090063: positive regulation of microtubule nucleation | 1.39E-05 |
| 7 | GO:0034757: negative regulation of iron ion transport | 1.39E-05 |
| 8 | GO:0016998: cell wall macromolecule catabolic process | 2.43E-05 |
| 9 | GO:0071215: cellular response to abscisic acid stimulus | 3.02E-05 |
| 10 | GO:0010271: regulation of chlorophyll catabolic process | 3.65E-05 |
| 11 | GO:0033566: gamma-tubulin complex localization | 3.65E-05 |
| 12 | GO:0009967: positive regulation of signal transduction | 3.65E-05 |
| 13 | GO:0010501: RNA secondary structure unwinding | 4.04E-05 |
| 14 | GO:0009658: chloroplast organization | 6.22E-05 |
| 15 | GO:0080117: secondary growth | 6.55E-05 |
| 16 | GO:0090391: granum assembly | 6.55E-05 |
| 17 | GO:0010476: gibberellin mediated signaling pathway | 6.55E-05 |
| 18 | GO:0048831: regulation of shoot system development | 2.22E-04 |
| 19 | GO:0048509: regulation of meristem development | 2.68E-04 |
| 20 | GO:0009793: embryo development ending in seed dormancy | 3.36E-04 |
| 21 | GO:0042255: ribosome assembly | 3.65E-04 |
| 22 | GO:0006353: DNA-templated transcription, termination | 3.65E-04 |
| 23 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.16E-04 |
| 24 | GO:0000373: Group II intron splicing | 4.68E-04 |
| 25 | GO:0016573: histone acetylation | 5.23E-04 |
| 26 | GO:0016441: posttranscriptional gene silencing | 5.78E-04 |
| 27 | GO:0009089: lysine biosynthetic process via diaminopimelate | 6.34E-04 |
| 28 | GO:0048229: gametophyte development | 6.34E-04 |
| 29 | GO:0009451: RNA modification | 6.61E-04 |
| 30 | GO:0007166: cell surface receptor signaling pathway | 7.35E-04 |
| 31 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.24E-03 |
| 32 | GO:0070417: cellular response to cold | 1.41E-03 |
| 33 | GO:0010087: phloem or xylem histogenesis | 1.49E-03 |
| 34 | GO:0009749: response to glucose | 1.72E-03 |
| 35 | GO:0031047: gene silencing by RNA | 1.88E-03 |
| 36 | GO:0032502: developmental process | 1.88E-03 |
| 37 | GO:0071805: potassium ion transmembrane transport | 2.13E-03 |
| 38 | GO:0010027: thylakoid membrane organization | 2.30E-03 |
| 39 | GO:0010029: regulation of seed germination | 2.39E-03 |
| 40 | GO:0000160: phosphorelay signal transduction system | 2.84E-03 |
| 41 | GO:0009636: response to toxic substance | 4.15E-03 |
| 42 | GO:0006813: potassium ion transport | 4.69E-03 |
| 43 | GO:0009736: cytokinin-activated signaling pathway | 4.69E-03 |
| 44 | GO:0009909: regulation of flower development | 5.03E-03 |
| 45 | GO:0006417: regulation of translation | 5.03E-03 |
| 46 | GO:0048367: shoot system development | 5.38E-03 |
| 47 | GO:0006396: RNA processing | 6.10E-03 |
| 48 | GO:0009845: seed germination | 7.38E-03 |
| 49 | GO:0009790: embryo development | 7.78E-03 |
| 50 | GO:0010228: vegetative to reproductive phase transition of meristem | 9.02E-03 |
| 51 | GO:0009739: response to gibberellin | 9.45E-03 |
| 52 | GO:0008380: RNA splicing | 9.90E-03 |
| 53 | GO:0006468: protein phosphorylation | 1.04E-02 |
| 54 | GO:0042254: ribosome biogenesis | 1.20E-02 |
| 55 | GO:0006970: response to osmotic stress | 1.25E-02 |
| 56 | GO:0006629: lipid metabolic process | 1.82E-02 |
| 57 | GO:0006397: mRNA processing | 1.88E-02 |
| 58 | GO:0006952: defense response | 3.43E-02 |
| 59 | GO:0009414: response to water deprivation | 4.46E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042834: peptidoglycan binding | 0.00E+00 |
| 2 | GO:0008836: diaminopimelate decarboxylase activity | 1.39E-05 |
| 3 | GO:0005078: MAP-kinase scaffold activity | 3.65E-05 |
| 4 | GO:0009884: cytokinin receptor activity | 3.65E-05 |
| 5 | GO:0032947: protein complex scaffold | 6.55E-05 |
| 6 | GO:0005034: osmosensor activity | 6.55E-05 |
| 7 | GO:0004004: ATP-dependent RNA helicase activity | 1.04E-04 |
| 8 | GO:0080030: methyl indole-3-acetate esterase activity | 2.22E-04 |
| 9 | GO:0019900: kinase binding | 2.68E-04 |
| 10 | GO:0008026: ATP-dependent helicase activity | 4.04E-04 |
| 11 | GO:0008173: RNA methyltransferase activity | 4.16E-04 |
| 12 | GO:0003724: RNA helicase activity | 4.16E-04 |
| 13 | GO:0004673: protein histidine kinase activity | 5.78E-04 |
| 14 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 6.05E-04 |
| 15 | GO:0000155: phosphorelay sensor kinase activity | 7.52E-04 |
| 16 | GO:0009982: pseudouridine synthase activity | 7.52E-04 |
| 17 | GO:0003712: transcription cofactor activity | 8.75E-04 |
| 18 | GO:0015079: potassium ion transmembrane transporter activity | 1.07E-03 |
| 19 | GO:0043424: protein histidine kinase binding | 1.07E-03 |
| 20 | GO:0004672: protein kinase activity | 1.27E-03 |
| 21 | GO:0003727: single-stranded RNA binding | 1.34E-03 |
| 22 | GO:0004402: histone acetyltransferase activity | 1.49E-03 |
| 23 | GO:0005199: structural constituent of cell wall | 1.56E-03 |
| 24 | GO:0019901: protein kinase binding | 1.72E-03 |
| 25 | GO:0003723: RNA binding | 2.12E-03 |
| 26 | GO:0003690: double-stranded DNA binding | 4.81E-03 |
| 27 | GO:0016298: lipase activity | 4.81E-03 |
| 28 | GO:0004386: helicase activity | 6.35E-03 |
| 29 | GO:0003824: catalytic activity | 6.76E-03 |
| 30 | GO:0019843: rRNA binding | 6.99E-03 |
| 31 | GO:0042802: identical protein binding | 1.03E-02 |
| 32 | GO:0016788: hydrolase activity, acting on ester bonds | 1.20E-02 |
| 33 | GO:0004871: signal transducer activity | 1.62E-02 |
| 34 | GO:0004519: endonuclease activity | 1.94E-02 |
| 35 | GO:0005524: ATP binding | 2.54E-02 |
| 36 | GO:0000166: nucleotide binding | 2.74E-02 |
| 37 | GO:0004674: protein serine/threonine kinase activity | 3.05E-02 |
| 38 | GO:0030246: carbohydrate binding | 3.39E-02 |
| 39 | GO:0005509: calcium ion binding | 4.28E-02 |
| 40 | GO:0005215: transporter activity | 4.87E-02 |