GO Enrichment Analysis of Co-expressed Genes with
AT4G30580
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0043488: regulation of mRNA stability | 0.00E+00 |
| 2 | GO:0090071: negative regulation of ribosome biogenesis | 0.00E+00 |
| 3 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 4 | GO:0071028: nuclear mRNA surveillance | 1.42E-04 |
| 5 | GO:0043266: regulation of potassium ion transport | 1.42E-04 |
| 6 | GO:0006659: phosphatidylserine biosynthetic process | 1.42E-04 |
| 7 | GO:2000021: regulation of ion homeostasis | 1.42E-04 |
| 8 | GO:1902458: positive regulation of stomatal opening | 1.42E-04 |
| 9 | GO:0006177: GMP biosynthetic process | 1.42E-04 |
| 10 | GO:1902265: abscisic acid homeostasis | 1.42E-04 |
| 11 | GO:0031125: rRNA 3'-end processing | 3.25E-04 |
| 12 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 3.25E-04 |
| 13 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 3.25E-04 |
| 14 | GO:0034475: U4 snRNA 3'-end processing | 3.25E-04 |
| 15 | GO:0045493: xylan catabolic process | 5.33E-04 |
| 16 | GO:0006760: folic acid-containing compound metabolic process | 5.33E-04 |
| 17 | GO:0016075: rRNA catabolic process | 5.33E-04 |
| 18 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 5.33E-04 |
| 19 | GO:0031022: nuclear migration along microfilament | 5.33E-04 |
| 20 | GO:0010589: leaf proximal/distal pattern formation | 5.33E-04 |
| 21 | GO:0046653: tetrahydrofolate metabolic process | 7.63E-04 |
| 22 | GO:0009902: chloroplast relocation | 1.01E-03 |
| 23 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 1.01E-03 |
| 24 | GO:0015846: polyamine transport | 1.01E-03 |
| 25 | GO:0046656: folic acid biosynthetic process | 1.01E-03 |
| 26 | GO:0006021: inositol biosynthetic process | 1.01E-03 |
| 27 | GO:0045038: protein import into chloroplast thylakoid membrane | 1.28E-03 |
| 28 | GO:0016123: xanthophyll biosynthetic process | 1.28E-03 |
| 29 | GO:0009117: nucleotide metabolic process | 1.57E-03 |
| 30 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 1.57E-03 |
| 31 | GO:0016554: cytidine to uridine editing | 1.57E-03 |
| 32 | GO:0032973: amino acid export | 1.57E-03 |
| 33 | GO:0010190: cytochrome b6f complex assembly | 1.57E-03 |
| 34 | GO:0046654: tetrahydrofolate biosynthetic process | 1.88E-03 |
| 35 | GO:0009903: chloroplast avoidance movement | 1.88E-03 |
| 36 | GO:0080086: stamen filament development | 1.88E-03 |
| 37 | GO:0042372: phylloquinone biosynthetic process | 1.88E-03 |
| 38 | GO:0017148: negative regulation of translation | 1.88E-03 |
| 39 | GO:0009627: systemic acquired resistance | 1.95E-03 |
| 40 | GO:0006400: tRNA modification | 2.21E-03 |
| 41 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 2.21E-03 |
| 42 | GO:0043090: amino acid import | 2.21E-03 |
| 43 | GO:0010078: maintenance of root meristem identity | 2.56E-03 |
| 44 | GO:0009704: de-etiolation | 2.56E-03 |
| 45 | GO:2000070: regulation of response to water deprivation | 2.56E-03 |
| 46 | GO:0010492: maintenance of shoot apical meristem identity | 2.56E-03 |
| 47 | GO:0009787: regulation of abscisic acid-activated signaling pathway | 2.56E-03 |
| 48 | GO:0042255: ribosome assembly | 2.56E-03 |
| 49 | GO:0046620: regulation of organ growth | 2.56E-03 |
| 50 | GO:0006353: DNA-templated transcription, termination | 2.56E-03 |
| 51 | GO:0006875: cellular metal ion homeostasis | 2.56E-03 |
| 52 | GO:0043562: cellular response to nitrogen levels | 2.93E-03 |
| 53 | GO:0009658: chloroplast organization | 3.30E-03 |
| 54 | GO:0048507: meristem development | 3.31E-03 |
| 55 | GO:0080144: amino acid homeostasis | 3.31E-03 |
| 56 | GO:1900865: chloroplast RNA modification | 3.71E-03 |
| 57 | GO:0010267: production of ta-siRNAs involved in RNA interference | 3.71E-03 |
| 58 | GO:0042761: very long-chain fatty acid biosynthetic process | 3.71E-03 |
| 59 | GO:0006949: syncytium formation | 4.12E-03 |
| 60 | GO:1903507: negative regulation of nucleic acid-templated transcription | 4.55E-03 |
| 61 | GO:0009684: indoleacetic acid biosynthetic process | 4.55E-03 |
| 62 | GO:0006415: translational termination | 4.55E-03 |
| 63 | GO:0019684: photosynthesis, light reaction | 4.55E-03 |
| 64 | GO:0009089: lysine biosynthetic process via diaminopimelate | 4.55E-03 |
| 65 | GO:0045037: protein import into chloroplast stroma | 4.99E-03 |
| 66 | GO:0050826: response to freezing | 5.45E-03 |
| 67 | GO:0010588: cotyledon vascular tissue pattern formation | 5.45E-03 |
| 68 | GO:0030048: actin filament-based movement | 5.45E-03 |
| 69 | GO:0048467: gynoecium development | 5.92E-03 |
| 70 | GO:0090351: seedling development | 6.41E-03 |
| 71 | GO:0010030: positive regulation of seed germination | 6.41E-03 |
| 72 | GO:0006636: unsaturated fatty acid biosynthetic process | 6.91E-03 |
| 73 | GO:0010025: wax biosynthetic process | 6.91E-03 |
| 74 | GO:0030150: protein import into mitochondrial matrix | 7.42E-03 |
| 75 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 9.05E-03 |
| 76 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 9.62E-03 |
| 77 | GO:0009306: protein secretion | 1.02E-02 |
| 78 | GO:0009793: embryo development ending in seed dormancy | 1.07E-02 |
| 79 | GO:0016117: carotenoid biosynthetic process | 1.08E-02 |
| 80 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 1.08E-02 |
| 81 | GO:0080022: primary root development | 1.14E-02 |
| 82 | GO:0008033: tRNA processing | 1.14E-02 |
| 83 | GO:0010087: phloem or xylem histogenesis | 1.14E-02 |
| 84 | GO:0042631: cellular response to water deprivation | 1.14E-02 |
| 85 | GO:0010305: leaf vascular tissue pattern formation | 1.20E-02 |
| 86 | GO:0009958: positive gravitropism | 1.20E-02 |
| 87 | GO:0008654: phospholipid biosynthetic process | 1.33E-02 |
| 88 | GO:0009851: auxin biosynthetic process | 1.33E-02 |
| 89 | GO:0009791: post-embryonic development | 1.33E-02 |
| 90 | GO:0048825: cotyledon development | 1.33E-02 |
| 91 | GO:0032502: developmental process | 1.46E-02 |
| 92 | GO:0009828: plant-type cell wall loosening | 1.60E-02 |
| 93 | GO:0071805: potassium ion transmembrane transport | 1.67E-02 |
| 94 | GO:0009911: positive regulation of flower development | 1.81E-02 |
| 95 | GO:0010029: regulation of seed germination | 1.88E-02 |
| 96 | GO:0010411: xyloglucan metabolic process | 2.03E-02 |
| 97 | GO:0009631: cold acclimation | 2.42E-02 |
| 98 | GO:0048527: lateral root development | 2.42E-02 |
| 99 | GO:0009637: response to blue light | 2.59E-02 |
| 100 | GO:0015979: photosynthesis | 2.68E-02 |
| 101 | GO:0006839: mitochondrial transport | 2.84E-02 |
| 102 | GO:0009926: auxin polar transport | 3.10E-02 |
| 103 | GO:0016042: lipid catabolic process | 3.36E-02 |
| 104 | GO:0009965: leaf morphogenesis | 3.37E-02 |
| 105 | GO:0031347: regulation of defense response | 3.55E-02 |
| 106 | GO:0071555: cell wall organization | 3.57E-02 |
| 107 | GO:0009664: plant-type cell wall organization | 3.65E-02 |
| 108 | GO:0042538: hyperosmotic salinity response | 3.65E-02 |
| 109 | GO:0006813: potassium ion transport | 3.83E-02 |
| 110 | GO:0006417: regulation of translation | 4.12E-02 |
| 111 | GO:0048367: shoot system development | 4.42E-02 |
| 112 | GO:0009620: response to fungus | 4.62E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 4 | GO:0008115: sarcosine oxidase activity | 0.00E+00 |
| 5 | GO:0019808: polyamine binding | 0.00E+00 |
| 6 | GO:0015088: copper uptake transmembrane transporter activity | 1.42E-04 |
| 7 | GO:0050139: nicotinate-N-glucosyltransferase activity | 1.42E-04 |
| 8 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 1.42E-04 |
| 9 | GO:0009496: plastoquinol--plastocyanin reductase activity | 1.42E-04 |
| 10 | GO:0010291: carotene beta-ring hydroxylase activity | 3.25E-04 |
| 11 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 3.25E-04 |
| 12 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 3.25E-04 |
| 13 | GO:0003938: IMP dehydrogenase activity | 3.25E-04 |
| 14 | GO:0102083: 7,8-dihydromonapterin aldolase activity | 3.25E-04 |
| 15 | GO:0004312: fatty acid synthase activity | 3.25E-04 |
| 16 | GO:0015929: hexosaminidase activity | 3.25E-04 |
| 17 | GO:0004563: beta-N-acetylhexosaminidase activity | 3.25E-04 |
| 18 | GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | 3.25E-04 |
| 19 | GO:0004512: inositol-3-phosphate synthase activity | 3.25E-04 |
| 20 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 3.25E-04 |
| 21 | GO:0004150: dihydroneopterin aldolase activity | 3.25E-04 |
| 22 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 3.25E-04 |
| 23 | GO:0004315: 3-oxoacyl-[acyl-carrier-protein] synthase activity | 5.33E-04 |
| 24 | GO:0052692: raffinose alpha-galactosidase activity | 5.33E-04 |
| 25 | GO:0004557: alpha-galactosidase activity | 5.33E-04 |
| 26 | GO:0043023: ribosomal large subunit binding | 7.63E-04 |
| 27 | GO:0035198: miRNA binding | 7.63E-04 |
| 28 | GO:0035529: NADH pyrophosphatase activity | 7.63E-04 |
| 29 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.01E-03 |
| 30 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.01E-03 |
| 31 | GO:0016846: carbon-sulfur lyase activity | 1.28E-03 |
| 32 | GO:0004040: amidase activity | 1.28E-03 |
| 33 | GO:0016462: pyrophosphatase activity | 1.57E-03 |
| 34 | GO:0042578: phosphoric ester hydrolase activity | 1.57E-03 |
| 35 | GO:0016208: AMP binding | 1.57E-03 |
| 36 | GO:0003730: mRNA 3'-UTR binding | 1.88E-03 |
| 37 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 1.88E-03 |
| 38 | GO:0043022: ribosome binding | 2.56E-03 |
| 39 | GO:0003747: translation release factor activity | 3.31E-03 |
| 40 | GO:0005381: iron ion transmembrane transporter activity | 3.71E-03 |
| 41 | GO:0016740: transferase activity | 4.48E-03 |
| 42 | GO:0052689: carboxylic ester hydrolase activity | 4.92E-03 |
| 43 | GO:0004022: alcohol dehydrogenase (NAD) activity | 5.45E-03 |
| 44 | GO:0031072: heat shock protein binding | 5.45E-03 |
| 45 | GO:0000175: 3'-5'-exoribonuclease activity | 5.45E-03 |
| 46 | GO:0015266: protein channel activity | 5.45E-03 |
| 47 | GO:0003725: double-stranded RNA binding | 5.45E-03 |
| 48 | GO:0005528: FK506 binding | 7.42E-03 |
| 49 | GO:0003714: transcription corepressor activity | 7.42E-03 |
| 50 | GO:0015079: potassium ion transmembrane transporter activity | 7.95E-03 |
| 51 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 8.49E-03 |
| 52 | GO:0008408: 3'-5' exonuclease activity | 8.49E-03 |
| 53 | GO:0030570: pectate lyase activity | 9.62E-03 |
| 54 | GO:0003727: single-stranded RNA binding | 1.02E-02 |
| 55 | GO:0008536: Ran GTPase binding | 1.20E-02 |
| 56 | GO:0016788: hydrolase activity, acting on ester bonds | 1.93E-02 |
| 57 | GO:0004721: phosphoprotein phosphatase activity | 2.03E-02 |
| 58 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 2.19E-02 |
| 59 | GO:0003993: acid phosphatase activity | 2.67E-02 |
| 60 | GO:0051539: 4 iron, 4 sulfur cluster binding | 2.84E-02 |
| 61 | GO:0005509: calcium ion binding | 3.23E-02 |
| 62 | GO:0003723: RNA binding | 3.32E-02 |
| 63 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 3.46E-02 |
| 64 | GO:0003690: double-stranded DNA binding | 3.93E-02 |
| 65 | GO:0003777: microtubule motor activity | 4.12E-02 |
| 66 | GO:0015171: amino acid transmembrane transporter activity | 4.12E-02 |
| 67 | GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups | 4.42E-02 |
| 68 | GO:0080043: quercetin 3-O-glucosyltransferase activity | 4.62E-02 |
| 69 | GO:0080044: quercetin 7-O-glucosyltransferase activity | 4.62E-02 |
| 70 | GO:0016874: ligase activity | 4.72E-02 |
| 71 | GO:0051082: unfolded protein binding | 4.92E-02 |