GO Enrichment Analysis of Co-expressed Genes with
AT4G30000
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0070455: positive regulation of heme biosynthetic process | 0.00E+00 |
| 2 | GO:0045184: establishment of protein localization | 0.00E+00 |
| 3 | GO:0009606: tropism | 0.00E+00 |
| 4 | GO:1903224: regulation of endodermal cell differentiation | 0.00E+00 |
| 5 | GO:0031222: arabinan catabolic process | 0.00E+00 |
| 6 | GO:0042793: transcription from plastid promoter | 5.13E-09 |
| 7 | GO:0046620: regulation of organ growth | 4.58E-06 |
| 8 | GO:0009658: chloroplast organization | 4.78E-05 |
| 9 | GO:0000105: histidine biosynthetic process | 2.19E-04 |
| 10 | GO:1903866: palisade mesophyll development | 2.41E-04 |
| 11 | GO:0035987: endodermal cell differentiation | 2.41E-04 |
| 12 | GO:0006436: tryptophanyl-tRNA aminoacylation | 2.41E-04 |
| 13 | GO:0034757: negative regulation of iron ion transport | 2.41E-04 |
| 14 | GO:0042659: regulation of cell fate specification | 2.41E-04 |
| 15 | GO:0090558: plant epidermis development | 2.41E-04 |
| 16 | GO:0009828: plant-type cell wall loosening | 3.32E-04 |
| 17 | GO:0010027: thylakoid membrane organization | 4.19E-04 |
| 18 | GO:0010271: regulation of chlorophyll catabolic process | 5.34E-04 |
| 19 | GO:0018026: peptidyl-lysine monomethylation | 5.34E-04 |
| 20 | GO:0071497: cellular response to freezing | 5.34E-04 |
| 21 | GO:0009662: etioplast organization | 5.34E-04 |
| 22 | GO:0080009: mRNA methylation | 5.34E-04 |
| 23 | GO:2000123: positive regulation of stomatal complex development | 5.34E-04 |
| 24 | GO:0043039: tRNA aminoacylation | 5.34E-04 |
| 25 | GO:0048481: plant ovule development | 5.88E-04 |
| 26 | GO:0000160: phosphorelay signal transduction system | 6.26E-04 |
| 27 | GO:0009767: photosynthetic electron transport chain | 6.81E-04 |
| 28 | GO:0080117: secondary growth | 8.68E-04 |
| 29 | GO:0090391: granum assembly | 8.68E-04 |
| 30 | GO:0001578: microtubule bundle formation | 8.68E-04 |
| 31 | GO:0090708: specification of plant organ axis polarity | 8.68E-04 |
| 32 | GO:0009733: response to auxin | 1.02E-03 |
| 33 | GO:0009926: auxin polar transport | 1.09E-03 |
| 34 | GO:0033014: tetrapyrrole biosynthetic process | 1.24E-03 |
| 35 | GO:0006424: glutamyl-tRNA aminoacylation | 1.24E-03 |
| 36 | GO:0046739: transport of virus in multicellular host | 1.24E-03 |
| 37 | GO:2000904: regulation of starch metabolic process | 1.24E-03 |
| 38 | GO:0051289: protein homotetramerization | 1.24E-03 |
| 39 | GO:0044211: CTP salvage | 1.24E-03 |
| 40 | GO:0009664: plant-type cell wall organization | 1.44E-03 |
| 41 | GO:0009736: cytokinin-activated signaling pathway | 1.58E-03 |
| 42 | GO:0044206: UMP salvage | 1.65E-03 |
| 43 | GO:0030104: water homeostasis | 1.65E-03 |
| 44 | GO:2000038: regulation of stomatal complex development | 1.65E-03 |
| 45 | GO:0006021: inositol biosynthetic process | 1.65E-03 |
| 46 | GO:0006346: methylation-dependent chromatin silencing | 1.65E-03 |
| 47 | GO:1901141: regulation of lignin biosynthetic process | 1.65E-03 |
| 48 | GO:0051322: anaphase | 1.65E-03 |
| 49 | GO:0009734: auxin-activated signaling pathway | 1.81E-03 |
| 50 | GO:0009107: lipoate biosynthetic process | 2.11E-03 |
| 51 | GO:0010375: stomatal complex patterning | 2.11E-03 |
| 52 | GO:0048544: recognition of pollen | 2.21E-03 |
| 53 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 2.60E-03 |
| 54 | GO:0006655: phosphatidylglycerol biosynthetic process | 2.60E-03 |
| 55 | GO:1902456: regulation of stomatal opening | 2.60E-03 |
| 56 | GO:0048831: regulation of shoot system development | 2.60E-03 |
| 57 | GO:0010405: arabinogalactan protein metabolic process | 2.60E-03 |
| 58 | GO:0016554: cytidine to uridine editing | 2.60E-03 |
| 59 | GO:0010315: auxin efflux | 2.60E-03 |
| 60 | GO:0006206: pyrimidine nucleobase metabolic process | 2.60E-03 |
| 61 | GO:0010583: response to cyclopentenone | 2.71E-03 |
| 62 | GO:0010252: auxin homeostasis | 3.07E-03 |
| 63 | GO:0048509: regulation of meristem development | 3.12E-03 |
| 64 | GO:0030488: tRNA methylation | 3.12E-03 |
| 65 | GO:2000067: regulation of root morphogenesis | 3.12E-03 |
| 66 | GO:0010103: stomatal complex morphogenesis | 3.68E-03 |
| 67 | GO:0009610: response to symbiotic fungus | 3.68E-03 |
| 68 | GO:0048766: root hair initiation | 4.27E-03 |
| 69 | GO:0055075: potassium ion homeostasis | 4.27E-03 |
| 70 | GO:0007389: pattern specification process | 4.89E-03 |
| 71 | GO:0010497: plasmodesmata-mediated intercellular transport | 4.89E-03 |
| 72 | GO:0006783: heme biosynthetic process | 5.54E-03 |
| 73 | GO:0000373: Group II intron splicing | 5.54E-03 |
| 74 | GO:0031425: chloroplast RNA processing | 6.21E-03 |
| 75 | GO:0042761: very long-chain fatty acid biosynthetic process | 6.21E-03 |
| 76 | GO:2000280: regulation of root development | 6.21E-03 |
| 77 | GO:0009638: phototropism | 6.21E-03 |
| 78 | GO:1900865: chloroplast RNA modification | 6.21E-03 |
| 79 | GO:0006949: syncytium formation | 6.92E-03 |
| 80 | GO:0010015: root morphogenesis | 7.65E-03 |
| 81 | GO:0009826: unidimensional cell growth | 8.21E-03 |
| 82 | GO:0045037: protein import into chloroplast stroma | 8.41E-03 |
| 83 | GO:0006790: sulfur compound metabolic process | 8.41E-03 |
| 84 | GO:0016024: CDP-diacylglycerol biosynthetic process | 8.41E-03 |
| 85 | GO:0009785: blue light signaling pathway | 9.20E-03 |
| 86 | GO:0009691: cytokinin biosynthetic process | 9.20E-03 |
| 87 | GO:0009416: response to light stimulus | 1.05E-02 |
| 88 | GO:0090351: seedling development | 1.09E-02 |
| 89 | GO:0046854: phosphatidylinositol phosphorylation | 1.09E-02 |
| 90 | GO:0006071: glycerol metabolic process | 1.17E-02 |
| 91 | GO:0006833: water transport | 1.17E-02 |
| 92 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 1.18E-02 |
| 93 | GO:0005992: trehalose biosynthetic process | 1.26E-02 |
| 94 | GO:0051302: regulation of cell division | 1.35E-02 |
| 95 | GO:0019953: sexual reproduction | 1.35E-02 |
| 96 | GO:0006418: tRNA aminoacylation for protein translation | 1.35E-02 |
| 97 | GO:0016998: cell wall macromolecule catabolic process | 1.45E-02 |
| 98 | GO:0006306: DNA methylation | 1.45E-02 |
| 99 | GO:0006730: one-carbon metabolic process | 1.54E-02 |
| 100 | GO:0007005: mitochondrion organization | 1.54E-02 |
| 101 | GO:0031348: negative regulation of defense response | 1.54E-02 |
| 102 | GO:0010082: regulation of root meristem growth | 1.64E-02 |
| 103 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 1.64E-02 |
| 104 | GO:0071215: cellular response to abscisic acid stimulus | 1.64E-02 |
| 105 | GO:0006284: base-excision repair | 1.74E-02 |
| 106 | GO:0070417: cellular response to cold | 1.84E-02 |
| 107 | GO:0008033: tRNA processing | 1.95E-02 |
| 108 | GO:0010087: phloem or xylem histogenesis | 1.95E-02 |
| 109 | GO:0010118: stomatal movement | 1.95E-02 |
| 110 | GO:0000226: microtubule cytoskeleton organization | 1.95E-02 |
| 111 | GO:0009058: biosynthetic process | 1.99E-02 |
| 112 | GO:0009958: positive gravitropism | 2.05E-02 |
| 113 | GO:0008654: phospholipid biosynthetic process | 2.27E-02 |
| 114 | GO:0009851: auxin biosynthetic process | 2.27E-02 |
| 115 | GO:0009791: post-embryonic development | 2.27E-02 |
| 116 | GO:0000302: response to reactive oxygen species | 2.38E-02 |
| 117 | GO:0071554: cell wall organization or biogenesis | 2.38E-02 |
| 118 | GO:0031047: gene silencing by RNA | 2.50E-02 |
| 119 | GO:0019761: glucosinolate biosynthetic process | 2.50E-02 |
| 120 | GO:0009630: gravitropism | 2.50E-02 |
| 121 | GO:0009451: RNA modification | 2.66E-02 |
| 122 | GO:0006464: cellular protein modification process | 2.73E-02 |
| 123 | GO:0007267: cell-cell signaling | 2.85E-02 |
| 124 | GO:0009739: response to gibberellin | 2.91E-02 |
| 125 | GO:0000910: cytokinesis | 2.98E-02 |
| 126 | GO:0001666: response to hypoxia | 3.10E-02 |
| 127 | GO:0010029: regulation of seed germination | 3.23E-02 |
| 128 | GO:0010411: xyloglucan metabolic process | 3.48E-02 |
| 129 | GO:0015995: chlorophyll biosynthetic process | 3.48E-02 |
| 130 | GO:0048767: root hair elongation | 3.88E-02 |
| 131 | GO:0006811: ion transport | 4.01E-02 |
| 132 | GO:0006499: N-terminal protein myristoylation | 4.01E-02 |
| 133 | GO:0010119: regulation of stomatal movement | 4.15E-02 |
| 134 | GO:0009631: cold acclimation | 4.15E-02 |
| 135 | GO:0006865: amino acid transport | 4.29E-02 |
| 136 | GO:0030001: metal ion transport | 4.86E-02 |
| 137 | GO:0080167: response to karrikin | 4.96E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004401: histidinol-phosphatase activity | 0.00E+00 |
| 2 | GO:0071633: dihydroceramidase activity | 0.00E+00 |
| 3 | GO:0070009: serine-type aminopeptidase activity | 0.00E+00 |
| 4 | GO:0052834: inositol monophosphate phosphatase activity | 0.00E+00 |
| 5 | GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity | 2.41E-04 |
| 6 | GO:0052381: tRNA dimethylallyltransferase activity | 2.41E-04 |
| 7 | GO:0004818: glutamate-tRNA ligase activity | 2.41E-04 |
| 8 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 2.41E-04 |
| 9 | GO:0004830: tryptophan-tRNA ligase activity | 2.41E-04 |
| 10 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 2.41E-04 |
| 11 | GO:0004400: histidinol-phosphate transaminase activity | 2.41E-04 |
| 12 | GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity | 2.41E-04 |
| 13 | GO:0009884: cytokinin receptor activity | 5.34E-04 |
| 14 | GO:0017118: lipoyltransferase activity | 5.34E-04 |
| 15 | GO:0016415: octanoyltransferase activity | 5.34E-04 |
| 16 | GO:0052832: inositol monophosphate 3-phosphatase activity | 5.34E-04 |
| 17 | GO:0008934: inositol monophosphate 1-phosphatase activity | 5.34E-04 |
| 18 | GO:0052833: inositol monophosphate 4-phosphatase activity | 5.34E-04 |
| 19 | GO:0015929: hexosaminidase activity | 5.34E-04 |
| 20 | GO:0004563: beta-N-acetylhexosaminidase activity | 5.34E-04 |
| 21 | GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity | 5.34E-04 |
| 22 | GO:0005034: osmosensor activity | 8.68E-04 |
| 23 | GO:0017150: tRNA dihydrouridine synthase activity | 8.68E-04 |
| 24 | GO:0001872: (1->3)-beta-D-glucan binding | 1.24E-03 |
| 25 | GO:0043495: protein anchor | 1.65E-03 |
| 26 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.65E-03 |
| 27 | GO:0016279: protein-lysine N-methyltransferase activity | 1.65E-03 |
| 28 | GO:0004845: uracil phosphoribosyltransferase activity | 1.65E-03 |
| 29 | GO:0005275: amine transmembrane transporter activity | 2.11E-03 |
| 30 | GO:0008725: DNA-3-methyladenine glycosylase activity | 2.11E-03 |
| 31 | GO:0004523: RNA-DNA hybrid ribonuclease activity | 2.11E-03 |
| 32 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.11E-03 |
| 33 | GO:0004605: phosphatidate cytidylyltransferase activity | 2.60E-03 |
| 34 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 2.60E-03 |
| 35 | GO:0004518: nuclease activity | 2.71E-03 |
| 36 | GO:0000156: phosphorelay response regulator activity | 2.89E-03 |
| 37 | GO:0004849: uridine kinase activity | 3.12E-03 |
| 38 | GO:0004656: procollagen-proline 4-dioxygenase activity | 3.12E-03 |
| 39 | GO:0019900: kinase binding | 3.12E-03 |
| 40 | GO:0008195: phosphatidate phosphatase activity | 3.12E-03 |
| 41 | GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | 3.12E-03 |
| 42 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 3.12E-03 |
| 43 | GO:0030246: carbohydrate binding | 4.57E-03 |
| 44 | GO:0008889: glycerophosphodiester phosphodiesterase activity | 5.54E-03 |
| 45 | GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors | 6.04E-03 |
| 46 | GO:0009672: auxin:proton symporter activity | 6.21E-03 |
| 47 | GO:0004673: protein histidine kinase activity | 6.92E-03 |
| 48 | GO:0004805: trehalose-phosphatase activity | 6.92E-03 |
| 49 | GO:0005089: Rho guanyl-nucleotide exchange factor activity | 7.65E-03 |
| 50 | GO:0000049: tRNA binding | 8.41E-03 |
| 51 | GO:0004022: alcohol dehydrogenase (NAD) activity | 9.20E-03 |
| 52 | GO:0004089: carbonate dehydratase activity | 9.20E-03 |
| 53 | GO:0031072: heat shock protein binding | 9.20E-03 |
| 54 | GO:0000155: phosphorelay sensor kinase activity | 9.20E-03 |
| 55 | GO:0010329: auxin efflux transmembrane transporter activity | 9.20E-03 |
| 56 | GO:0031418: L-ascorbic acid binding | 1.26E-02 |
| 57 | GO:0043424: protein histidine kinase binding | 1.35E-02 |
| 58 | GO:0005345: purine nucleobase transmembrane transporter activity | 1.35E-02 |
| 59 | GO:0004650: polygalacturonase activity | 1.37E-02 |
| 60 | GO:0003964: RNA-directed DNA polymerase activity | 1.45E-02 |
| 61 | GO:0008408: 3'-5' exonuclease activity | 1.45E-02 |
| 62 | GO:0035251: UDP-glucosyltransferase activity | 1.45E-02 |
| 63 | GO:0004812: aminoacyl-tRNA ligase activity | 1.84E-02 |
| 64 | GO:0004527: exonuclease activity | 2.05E-02 |
| 65 | GO:0004519: endonuclease activity | 2.06E-02 |
| 66 | GO:0010181: FMN binding | 2.16E-02 |
| 67 | GO:0019901: protein kinase binding | 2.27E-02 |
| 68 | GO:0016762: xyloglucan:xyloglucosyl transferase activity | 2.38E-02 |
| 69 | GO:0016413: O-acetyltransferase activity | 2.98E-02 |
| 70 | GO:0051213: dioxygenase activity | 3.10E-02 |
| 71 | GO:0042802: identical protein binding | 3.30E-02 |
| 72 | GO:0005215: transporter activity | 3.47E-02 |
| 73 | GO:0030247: polysaccharide binding | 3.48E-02 |
| 74 | GO:0016798: hydrolase activity, acting on glycosyl bonds | 3.48E-02 |
| 75 | GO:0015238: drug transmembrane transporter activity | 3.88E-02 |
| 76 | GO:0016788: hydrolase activity, acting on ester bonds | 4.09E-02 |
| 77 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.15E-02 |
| 78 | GO:0003746: translation elongation factor activity | 4.43E-02 |
| 79 | GO:0003993: acid phosphatase activity | 4.57E-02 |
| 80 | GO:0050660: flavin adenine dinucleotide binding | 4.63E-02 |
| 81 | GO:0042393: histone binding | 4.86E-02 |