Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G29230

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010365: positive regulation of ethylene biosynthetic process1.57E-05
2GO:0018022: peptidyl-lysine methylation4.12E-05
3GO:0006511: ubiquitin-dependent protein catabolic process5.19E-05
4GO:0010498: proteasomal protein catabolic process7.34E-05
5GO:0010255: glucose mediated signaling pathway1.11E-04
6GO:0009413: response to flooding1.11E-04
7GO:0009963: positive regulation of flavonoid biosynthetic process1.11E-04
8GO:0046283: anthocyanin-containing compound metabolic process1.98E-04
9GO:0006014: D-ribose metabolic process2.47E-04
10GO:0045899: positive regulation of RNA polymerase II transcriptional preinitiation complex assembly2.47E-04
11GO:0009082: branched-chain amino acid biosynthetic process2.97E-04
12GO:0009099: valine biosynthetic process2.97E-04
13GO:0071669: plant-type cell wall organization or biogenesis3.49E-04
14GO:0006506: GPI anchor biosynthetic process4.04E-04
15GO:0009097: isoleucine biosynthetic process4.60E-04
16GO:0009098: leucine biosynthetic process5.76E-04
17GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process8.35E-04
18GO:0010223: secondary shoot formation8.97E-04
19GO:0009934: regulation of meristem structural organization8.97E-04
20GO:0003333: amino acid transmembrane transport1.25E-03
21GO:0030433: ubiquitin-dependent ERAD pathway1.33E-03
22GO:0016117: carotenoid biosynthetic process1.56E-03
23GO:0019252: starch biosynthetic process1.90E-03
24GO:1901657: glycosyl compound metabolic process2.17E-03
25GO:0030163: protein catabolic process2.17E-03
26GO:0016311: dephosphorylation2.94E-03
27GO:0006839: mitochondrial transport3.91E-03
28GO:0009926: auxin polar transport4.25E-03
29GO:0051707: response to other organism4.25E-03
30GO:0009553: embryo sac development6.51E-03
31GO:0007166: cell surface receptor signaling pathway1.07E-02
32GO:0006468: protein phosphorylation1.27E-02
33GO:0007049: cell cycle1.43E-02
34GO:0009793: embryo development ending in seed dormancy1.67E-02
35GO:0016310: phosphorylation1.77E-02
36GO:0008152: metabolic process2.18E-02
37GO:0009555: pollen development3.06E-02
RankGO TermAdjusted P value
1GO:0004298: threonine-type endopeptidase activity2.06E-07
2GO:0052656: L-isoleucine transaminase activity1.11E-04
3GO:0052654: L-leucine transaminase activity1.11E-04
4GO:0052655: L-valine transaminase activity1.11E-04
5GO:0016279: protein-lysine N-methyltransferase activity1.53E-04
6GO:0004084: branched-chain-amino-acid transaminase activity1.53E-04
7GO:0036402: proteasome-activating ATPase activity2.47E-04
8GO:0004747: ribokinase activity2.97E-04
9GO:0008865: fructokinase activity4.04E-04
10GO:0015174: basic amino acid transmembrane transporter activity5.76E-04
11GO:0004860: protein kinase inhibitor activity7.00E-04
12GO:0004175: endopeptidase activity8.97E-04
13GO:0017025: TBP-class protein binding9.64E-04
14GO:0004725: protein tyrosine phosphatase activity1.03E-03
15GO:0004540: ribonuclease activity1.25E-03
16GO:0008233: peptidase activity1.37E-03
17GO:0016791: phosphatase activity2.26E-03
18GO:0102483: scopolin beta-glucosidase activity2.84E-03
19GO:0016887: ATPase activity3.12E-03
20GO:0008422: beta-glucosidase activity3.80E-03
21GO:0015171: amino acid transmembrane transporter activity5.59E-03
22GO:0080043: quercetin 3-O-glucosyltransferase activity6.24E-03
23GO:0080044: quercetin 7-O-glucosyltransferase activity6.24E-03
24GO:0003824: catalytic activity7.89E-03
25GO:0004675: transmembrane receptor protein serine/threonine kinase activity9.26E-03
26GO:0008194: UDP-glycosyltransferase activity1.05E-02
27GO:0016301: kinase activity3.37E-02
28GO:0004674: protein serine/threonine kinase activity3.56E-02
29GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds3.73E-02
30GO:0019825: oxygen binding3.94E-02
31GO:0005516: calmodulin binding4.09E-02
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Gene type



Gene DE type