Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G28050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0017009: protein-phycocyanobilin linkage0.00E+00
2GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
3GO:0015670: carbon dioxide transport0.00E+00
4GO:0008298: intracellular mRNA localization0.00E+00
5GO:1901918: negative regulation of exoribonuclease activity0.00E+00
6GO:0098586: cellular response to virus0.00E+00
7GO:0019722: calcium-mediated signaling2.04E-05
8GO:0007267: cell-cell signaling6.23E-05
9GO:0006098: pentose-phosphate shunt8.74E-05
10GO:0015995: chlorophyll biosynthetic process9.50E-05
11GO:0051180: vitamin transport9.88E-05
12GO:0030974: thiamine pyrophosphate transport9.88E-05
13GO:0046167: glycerol-3-phosphate biosynthetic process9.88E-05
14GO:0043007: maintenance of rDNA9.88E-05
15GO:0006094: gluconeogenesis1.98E-04
16GO:0046741: transport of virus in host, tissue to tissue2.32E-04
17GO:0015893: drug transport2.32E-04
18GO:0006650: glycerophospholipid metabolic process2.32E-04
19GO:0035304: regulation of protein dephosphorylation2.32E-04
20GO:0008616: queuosine biosynthetic process2.32E-04
21GO:0006833: water transport2.84E-04
22GO:0046168: glycerol-3-phosphate catabolic process3.86E-04
23GO:0044375: regulation of peroxisome size3.86E-04
24GO:0046621: negative regulation of organ growth3.86E-04
25GO:0006072: glycerol-3-phosphate metabolic process5.54E-04
26GO:0043572: plastid fission5.54E-04
27GO:0034220: ion transmembrane transport5.80E-04
28GO:0015689: molybdate ion transport7.37E-04
29GO:0019464: glycine decarboxylation via glycine cleavage system7.37E-04
30GO:0032502: developmental process8.14E-04
31GO:0006465: signal peptide processing9.32E-04
32GO:0042549: photosystem II stabilization1.14E-03
33GO:0010411: xyloglucan metabolic process1.27E-03
34GO:0000054: ribosomal subunit export from nucleus1.36E-03
35GO:0045926: negative regulation of growth1.36E-03
36GO:0010189: vitamin E biosynthetic process1.36E-03
37GO:0048437: floral organ development1.59E-03
38GO:0006400: tRNA modification1.59E-03
39GO:0042255: ribosome assembly1.84E-03
40GO:0006353: DNA-templated transcription, termination1.84E-03
41GO:0009690: cytokinin metabolic process1.84E-03
42GO:0016559: peroxisome fission1.84E-03
43GO:0006810: transport2.02E-03
44GO:0009657: plastid organization2.10E-03
45GO:0006526: arginine biosynthetic process2.10E-03
46GO:0009932: cell tip growth2.10E-03
47GO:0042546: cell wall biogenesis2.36E-03
48GO:0009821: alkaloid biosynthetic process2.37E-03
49GO:0051865: protein autoubiquitination2.37E-03
50GO:0090305: nucleic acid phosphodiester bond hydrolysis2.37E-03
51GO:0010205: photoinhibition2.65E-03
52GO:0043069: negative regulation of programmed cell death2.95E-03
53GO:0006415: translational termination3.25E-03
54GO:0019684: photosynthesis, light reaction3.25E-03
55GO:0006096: glycolytic process3.59E-03
56GO:0010020: chloroplast fission4.22E-03
57GO:0010207: photosystem II assembly4.22E-03
58GO:0007031: peroxisome organization4.57E-03
59GO:0051302: regulation of cell division5.65E-03
60GO:0055114: oxidation-reduction process6.30E-03
61GO:0006817: phosphate ion transport7.23E-03
62GO:0009306: protein secretion7.23E-03
63GO:0006520: cellular amino acid metabolic process8.50E-03
64GO:0009741: response to brassinosteroid8.50E-03
65GO:0046686: response to cadmium ion8.91E-03
66GO:0008654: phospholipid biosynthetic process9.39E-03
67GO:0000302: response to reactive oxygen species9.85E-03
68GO:0010583: response to cyclopentenone1.03E-02
69GO:0009658: chloroplast organization1.15E-02
70GO:0009853: photorespiration1.82E-02
71GO:0009414: response to water deprivation1.87E-02
72GO:0006839: mitochondrial transport2.00E-02
73GO:0032259: methylation2.02E-02
74GO:0006631: fatty acid metabolic process2.06E-02
75GO:0010114: response to red light2.18E-02
76GO:0042538: hyperosmotic salinity response2.57E-02
77GO:0006417: regulation of translation2.90E-02
78GO:0043086: negative regulation of catalytic activity3.04E-02
79GO:0005975: carbohydrate metabolic process3.24E-02
80GO:0006396: RNA processing3.54E-02
81GO:0009742: brassinosteroid mediated signaling pathway3.62E-02
82GO:0009058: biosynthetic process4.22E-02
83GO:0055085: transmembrane transport4.74E-02
84GO:0006633: fatty acid biosynthetic process4.78E-02
85GO:0006413: translational initiation4.86E-02
86GO:0009737: response to abscisic acid4.91E-02
RankGO TermAdjusted P value
1GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
2GO:0045550: geranylgeranyl reductase activity0.00E+00
3GO:0102193: protein-ribulosamine 3-kinase activity0.00E+00
4GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
5GO:0004332: fructose-bisphosphate aldolase activity2.21E-05
6GO:0080132: fatty acid alpha-hydroxylase activity9.88E-05
7GO:0010242: oxygen evolving activity9.88E-05
8GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity9.88E-05
9GO:0090422: thiamine pyrophosphate transporter activity9.88E-05
10GO:0004565: beta-galactosidase activity1.98E-04
11GO:0043024: ribosomal small subunit binding2.32E-04
12GO:0018708: thiol S-methyltransferase activity2.32E-04
13GO:0008479: queuine tRNA-ribosyltransferase activity2.32E-04
14GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity3.86E-04
15GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor3.86E-04
16GO:0010277: chlorophyllide a oxygenase [overall] activity3.86E-04
17GO:0003727: single-stranded RNA binding4.98E-04
18GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor5.54E-04
19GO:0004375: glycine dehydrogenase (decarboxylating) activity5.54E-04
20GO:0008080: N-acetyltransferase activity6.24E-04
21GO:0015098: molybdate ion transmembrane transporter activity7.37E-04
22GO:0016762: xyloglucan:xyloglucosyl transferase activity7.65E-04
23GO:0015250: water channel activity1.09E-03
24GO:0016798: hydrolase activity, acting on glycosyl bonds1.27E-03
25GO:0016491: oxidoreductase activity1.67E-03
26GO:0016844: strictosidine synthase activity2.65E-03
27GO:0051287: NAD binding2.73E-03
28GO:0004871: signal transducer activity3.09E-03
29GO:0003690: double-stranded DNA binding3.14E-03
30GO:0005315: inorganic phosphate transmembrane transporter activity3.89E-03
31GO:0031072: heat shock protein binding3.89E-03
32GO:0008266: poly(U) RNA binding4.22E-03
33GO:0031624: ubiquitin conjugating enzyme binding4.22E-03
34GO:0005215: transporter activity5.30E-03
35GO:0004518: nuclease activity1.03E-02
36GO:0016722: oxidoreductase activity, oxidizing metal ions1.18E-02
37GO:0005507: copper ion binding1.23E-02
38GO:0052689: carboxylic ester hydrolase activity1.58E-02
39GO:0005506: iron ion binding1.89E-02
40GO:0051539: 4 iron, 4 sulfur cluster binding2.00E-02
41GO:0043621: protein self-association2.31E-02
42GO:0035091: phosphatidylinositol binding2.31E-02
43GO:0051537: 2 iron, 2 sulfur cluster binding2.31E-02
44GO:0015293: symporter activity2.37E-02
45GO:0046983: protein dimerization activity2.77E-02
46GO:0051082: unfolded protein binding3.47E-02
47GO:0019843: rRNA binding4.07E-02
48GO:0016705: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen4.15E-02
49GO:0016829: lyase activity4.30E-02
50GO:0008565: protein transporter activity4.62E-02
51GO:0046910: pectinesterase inhibitor activity4.86E-02
52GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds4.92E-02
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Gene type



Gene DE type