GO Enrichment Analysis of Co-expressed Genes with
AT4G27490
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 2 | GO:0010068: protoderm histogenesis | 0.00E+00 |
| 3 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 4 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 5 | GO:0010412: mannan metabolic process | 0.00E+00 |
| 6 | GO:0071311: cellular response to acetate | 0.00E+00 |
| 7 | GO:0071260: cellular response to mechanical stimulus | 0.00E+00 |
| 8 | GO:2000505: regulation of energy homeostasis | 0.00E+00 |
| 9 | GO:0090706: specification of plant organ position | 0.00E+00 |
| 10 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
| 11 | GO:0007037: vacuolar phosphate transport | 0.00E+00 |
| 12 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 13 | GO:0051322: anaphase | 7.62E-05 |
| 14 | GO:1902183: regulation of shoot apical meristem development | 1.19E-04 |
| 15 | GO:0010158: abaxial cell fate specification | 1.19E-04 |
| 16 | GO:0009082: branched-chain amino acid biosynthetic process | 2.33E-04 |
| 17 | GO:0009099: valine biosynthetic process | 2.33E-04 |
| 18 | GO:0031426: polycistronic mRNA processing | 3.50E-04 |
| 19 | GO:0043266: regulation of potassium ion transport | 3.50E-04 |
| 20 | GO:0006659: phosphatidylserine biosynthetic process | 3.50E-04 |
| 21 | GO:0043087: regulation of GTPase activity | 3.50E-04 |
| 22 | GO:2000021: regulation of ion homeostasis | 3.50E-04 |
| 23 | GO:0006264: mitochondrial DNA replication | 3.50E-04 |
| 24 | GO:0033259: plastid DNA replication | 3.50E-04 |
| 25 | GO:1902458: positive regulation of stomatal opening | 3.50E-04 |
| 26 | GO:0006177: GMP biosynthetic process | 3.50E-04 |
| 27 | GO:0010450: inflorescence meristem growth | 3.50E-04 |
| 28 | GO:0006747: FAD biosynthetic process | 3.50E-04 |
| 29 | GO:0051171: regulation of nitrogen compound metabolic process | 3.50E-04 |
| 30 | GO:0009097: isoleucine biosynthetic process | 4.65E-04 |
| 31 | GO:2000024: regulation of leaf development | 5.58E-04 |
| 32 | GO:1900865: chloroplast RNA modification | 6.60E-04 |
| 33 | GO:1900871: chloroplast mRNA modification | 7.62E-04 |
| 34 | GO:0007154: cell communication | 7.62E-04 |
| 35 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 7.62E-04 |
| 36 | GO:1900033: negative regulation of trichome patterning | 7.62E-04 |
| 37 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 7.62E-04 |
| 38 | GO:0006739: NADP metabolic process | 7.62E-04 |
| 39 | GO:1905011: transmembrane phosphate ion transport from cytosol to vacuole | 7.62E-04 |
| 40 | GO:0016024: CDP-diacylglycerol biosynthetic process | 1.01E-03 |
| 41 | GO:0006753: nucleoside phosphate metabolic process | 1.23E-03 |
| 42 | GO:0071230: cellular response to amino acid stimulus | 1.23E-03 |
| 43 | GO:0009150: purine ribonucleotide metabolic process | 1.23E-03 |
| 44 | GO:0001578: microtubule bundle formation | 1.23E-03 |
| 45 | GO:0045493: xylan catabolic process | 1.23E-03 |
| 46 | GO:0030261: chromosome condensation | 1.23E-03 |
| 47 | GO:0045165: cell fate commitment | 1.23E-03 |
| 48 | GO:0051127: positive regulation of actin nucleation | 1.23E-03 |
| 49 | GO:0019419: sulfate reduction | 1.23E-03 |
| 50 | GO:0010255: glucose mediated signaling pathway | 1.78E-03 |
| 51 | GO:0006168: adenine salvage | 1.78E-03 |
| 52 | GO:0005992: trehalose biosynthetic process | 1.78E-03 |
| 53 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.78E-03 |
| 54 | GO:0006166: purine ribonucleoside salvage | 1.78E-03 |
| 55 | GO:0010239: chloroplast mRNA processing | 1.78E-03 |
| 56 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.78E-03 |
| 57 | GO:0009226: nucleotide-sugar biosynthetic process | 1.78E-03 |
| 58 | GO:0048645: animal organ formation | 1.78E-03 |
| 59 | GO:0006164: purine nucleotide biosynthetic process | 1.78E-03 |
| 60 | GO:0008615: pyridoxine biosynthetic process | 1.78E-03 |
| 61 | GO:0006021: inositol biosynthetic process | 2.38E-03 |
| 62 | GO:0006734: NADH metabolic process | 2.38E-03 |
| 63 | GO:0009165: nucleotide biosynthetic process | 2.38E-03 |
| 64 | GO:0048629: trichome patterning | 2.38E-03 |
| 65 | GO:0046355: mannan catabolic process | 2.38E-03 |
| 66 | GO:0015846: polyamine transport | 2.38E-03 |
| 67 | GO:0007020: microtubule nucleation | 2.38E-03 |
| 68 | GO:0007166: cell surface receptor signaling pathway | 2.53E-03 |
| 69 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.03E-03 |
| 70 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.05E-03 |
| 71 | GO:0044209: AMP salvage | 3.05E-03 |
| 72 | GO:0046785: microtubule polymerization | 3.05E-03 |
| 73 | GO:0010154: fruit development | 3.53E-03 |
| 74 | GO:0000741: karyogamy | 3.76E-03 |
| 75 | GO:0009117: nucleotide metabolic process | 3.76E-03 |
| 76 | GO:0009635: response to herbicide | 3.76E-03 |
| 77 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.76E-03 |
| 78 | GO:0016554: cytidine to uridine editing | 3.76E-03 |
| 79 | GO:0006655: phosphatidylglycerol biosynthetic process | 3.76E-03 |
| 80 | GO:0006139: nucleobase-containing compound metabolic process | 3.76E-03 |
| 81 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.76E-03 |
| 82 | GO:0009658: chloroplast organization | 4.01E-03 |
| 83 | GO:0009791: post-embryonic development | 4.07E-03 |
| 84 | GO:0048280: vesicle fusion with Golgi apparatus | 4.54E-03 |
| 85 | GO:0080086: stamen filament development | 4.54E-03 |
| 86 | GO:0009648: photoperiodism | 4.54E-03 |
| 87 | GO:0042372: phylloquinone biosynthetic process | 4.54E-03 |
| 88 | GO:0010583: response to cyclopentenone | 4.65E-03 |
| 89 | GO:0006400: tRNA modification | 5.36E-03 |
| 90 | GO:0048528: post-embryonic root development | 5.36E-03 |
| 91 | GO:0015937: coenzyme A biosynthetic process | 5.36E-03 |
| 92 | GO:0000910: cytokinesis | 5.95E-03 |
| 93 | GO:0046620: regulation of organ growth | 6.22E-03 |
| 94 | GO:0070413: trehalose metabolism in response to stress | 6.22E-03 |
| 95 | GO:0010078: maintenance of root meristem identity | 6.22E-03 |
| 96 | GO:0009704: de-etiolation | 6.22E-03 |
| 97 | GO:2000070: regulation of response to water deprivation | 6.22E-03 |
| 98 | GO:0009231: riboflavin biosynthetic process | 6.22E-03 |
| 99 | GO:0052543: callose deposition in cell wall | 6.22E-03 |
| 100 | GO:0007155: cell adhesion | 6.22E-03 |
| 101 | GO:0009627: systemic acquired resistance | 7.04E-03 |
| 102 | GO:0006997: nucleus organization | 7.14E-03 |
| 103 | GO:0043562: cellular response to nitrogen levels | 7.14E-03 |
| 104 | GO:0010093: specification of floral organ identity | 7.14E-03 |
| 105 | GO:0000373: Group II intron splicing | 8.10E-03 |
| 106 | GO:0006189: 'de novo' IMP biosynthetic process | 8.10E-03 |
| 107 | GO:0010206: photosystem II repair | 8.10E-03 |
| 108 | GO:0048507: meristem development | 8.10E-03 |
| 109 | GO:0009638: phototropism | 9.10E-03 |
| 110 | GO:0009098: leucine biosynthetic process | 9.10E-03 |
| 111 | GO:0042761: very long-chain fatty acid biosynthetic process | 9.10E-03 |
| 112 | GO:0010018: far-red light signaling pathway | 9.10E-03 |
| 113 | GO:0010380: regulation of chlorophyll biosynthetic process | 9.10E-03 |
| 114 | GO:0045490: pectin catabolic process | 9.92E-03 |
| 115 | GO:0000103: sulfate assimilation | 1.01E-02 |
| 116 | GO:0045036: protein targeting to chloroplast | 1.01E-02 |
| 117 | GO:0006949: syncytium formation | 1.01E-02 |
| 118 | GO:0006896: Golgi to vacuole transport | 1.01E-02 |
| 119 | GO:0009299: mRNA transcription | 1.01E-02 |
| 120 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.12E-02 |
| 121 | GO:0009684: indoleacetic acid biosynthetic process | 1.12E-02 |
| 122 | GO:0006816: calcium ion transport | 1.12E-02 |
| 123 | GO:0019684: photosynthesis, light reaction | 1.12E-02 |
| 124 | GO:0009089: lysine biosynthetic process via diaminopimelate | 1.12E-02 |
| 125 | GO:0045037: protein import into chloroplast stroma | 1.24E-02 |
| 126 | GO:0006790: sulfur compound metabolic process | 1.24E-02 |
| 127 | GO:0030036: actin cytoskeleton organization | 1.35E-02 |
| 128 | GO:0050826: response to freezing | 1.35E-02 |
| 129 | GO:0009725: response to hormone | 1.35E-02 |
| 130 | GO:0010588: cotyledon vascular tissue pattern formation | 1.35E-02 |
| 131 | GO:0048467: gynoecium development | 1.48E-02 |
| 132 | GO:0010143: cutin biosynthetic process | 1.48E-02 |
| 133 | GO:0010020: chloroplast fission | 1.48E-02 |
| 134 | GO:0009933: meristem structural organization | 1.48E-02 |
| 135 | GO:0006855: drug transmembrane transport | 1.58E-02 |
| 136 | GO:0010030: positive regulation of seed germination | 1.60E-02 |
| 137 | GO:0042753: positive regulation of circadian rhythm | 1.73E-02 |
| 138 | GO:0010025: wax biosynthetic process | 1.73E-02 |
| 139 | GO:0016310: phosphorylation | 1.81E-02 |
| 140 | GO:0009585: red, far-red light phototransduction | 1.83E-02 |
| 141 | GO:0007010: cytoskeleton organization | 1.86E-02 |
| 142 | GO:0010187: negative regulation of seed germination | 1.86E-02 |
| 143 | GO:0019344: cysteine biosynthetic process | 1.86E-02 |
| 144 | GO:0006874: cellular calcium ion homeostasis | 2.00E-02 |
| 145 | GO:0043622: cortical microtubule organization | 2.00E-02 |
| 146 | GO:0006468: protein phosphorylation | 2.14E-02 |
| 147 | GO:0048367: shoot system development | 2.23E-02 |
| 148 | GO:0035428: hexose transmembrane transport | 2.28E-02 |
| 149 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.28E-02 |
| 150 | GO:0031348: negative regulation of defense response | 2.28E-02 |
| 151 | GO:0009416: response to light stimulus | 2.38E-02 |
| 152 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 2.42E-02 |
| 153 | GO:0009740: gibberellic acid mediated signaling pathway | 2.45E-02 |
| 154 | GO:0019722: calcium-mediated signaling | 2.57E-02 |
| 155 | GO:0009306: protein secretion | 2.57E-02 |
| 156 | GO:0070417: cellular response to cold | 2.72E-02 |
| 157 | GO:0042147: retrograde transport, endosome to Golgi | 2.72E-02 |
| 158 | GO:0042335: cuticle development | 2.88E-02 |
| 159 | GO:0080022: primary root development | 2.88E-02 |
| 160 | GO:0034220: ion transmembrane transport | 2.88E-02 |
| 161 | GO:0010087: phloem or xylem histogenesis | 2.88E-02 |
| 162 | GO:0042631: cellular response to water deprivation | 2.88E-02 |
| 163 | GO:0010197: polar nucleus fusion | 3.04E-02 |
| 164 | GO:0010182: sugar mediated signaling pathway | 3.04E-02 |
| 165 | GO:0046323: glucose import | 3.04E-02 |
| 166 | GO:0009958: positive gravitropism | 3.04E-02 |
| 167 | GO:0045489: pectin biosynthetic process | 3.04E-02 |
| 168 | GO:0007018: microtubule-based movement | 3.20E-02 |
| 169 | GO:0048825: cotyledon development | 3.36E-02 |
| 170 | GO:0008654: phospholipid biosynthetic process | 3.36E-02 |
| 171 | GO:0009851: auxin biosynthetic process | 3.36E-02 |
| 172 | GO:0006623: protein targeting to vacuole | 3.36E-02 |
| 173 | GO:0000302: response to reactive oxygen species | 3.53E-02 |
| 174 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.53E-02 |
| 175 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.53E-02 |
| 176 | GO:0016042: lipid catabolic process | 3.56E-02 |
| 177 | GO:0016032: viral process | 3.70E-02 |
| 178 | GO:1901657: glycosyl compound metabolic process | 3.87E-02 |
| 179 | GO:0030163: protein catabolic process | 3.87E-02 |
| 180 | GO:0006464: cellular protein modification process | 4.04E-02 |
| 181 | GO:0009828: plant-type cell wall loosening | 4.04E-02 |
| 182 | GO:0009639: response to red or far red light | 4.04E-02 |
| 183 | GO:0006413: translational initiation | 4.18E-02 |
| 184 | GO:0040008: regulation of growth | 4.28E-02 |
| 185 | GO:0016126: sterol biosynthetic process | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 3 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 4 | GO:0015276: ligand-gated ion channel activity | 0.00E+00 |
| 5 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 6 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
| 7 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 8 | GO:0019808: polyamine binding | 0.00E+00 |
| 9 | GO:0030570: pectate lyase activity | 2.57E-04 |
| 10 | GO:0052856: NADHX epimerase activity | 3.50E-04 |
| 11 | GO:0003984: acetolactate synthase activity | 3.50E-04 |
| 12 | GO:0052857: NADPHX epimerase activity | 3.50E-04 |
| 13 | GO:0050139: nicotinate-N-glucosyltransferase activity | 3.50E-04 |
| 14 | GO:0004733: pyridoxamine-phosphate oxidase activity | 3.50E-04 |
| 15 | GO:0050567: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity | 3.50E-04 |
| 16 | GO:0010945: CoA pyrophosphatase activity | 3.50E-04 |
| 17 | GO:0008066: glutamate receptor activity | 3.50E-04 |
| 18 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 3.62E-04 |
| 19 | GO:0008017: microtubule binding | 4.48E-04 |
| 20 | GO:0004512: inositol-3-phosphate synthase activity | 7.62E-04 |
| 21 | GO:0008839: 4-hydroxy-tetrahydrodipicolinate reductase | 7.62E-04 |
| 22 | GO:0048531: beta-1,3-galactosyltransferase activity | 7.62E-04 |
| 23 | GO:0017118: lipoyltransferase activity | 7.62E-04 |
| 24 | GO:0043425: bHLH transcription factor binding | 7.62E-04 |
| 25 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 7.62E-04 |
| 26 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 7.62E-04 |
| 27 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 7.62E-04 |
| 28 | GO:0003938: IMP dehydrogenase activity | 7.62E-04 |
| 29 | GO:0009973: adenylyl-sulfate reductase activity | 7.62E-04 |
| 30 | GO:0003919: FMN adenylyltransferase activity | 7.62E-04 |
| 31 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 7.62E-04 |
| 32 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 7.62E-04 |
| 33 | GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | 7.62E-04 |
| 34 | GO:0004805: trehalose-phosphatase activity | 7.69E-04 |
| 35 | GO:0016829: lyase activity | 1.42E-03 |
| 36 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.78E-03 |
| 37 | GO:0052656: L-isoleucine transaminase activity | 1.78E-03 |
| 38 | GO:0047627: adenylylsulfatase activity | 1.78E-03 |
| 39 | GO:0052654: L-leucine transaminase activity | 1.78E-03 |
| 40 | GO:0052655: L-valine transaminase activity | 1.78E-03 |
| 41 | GO:0001872: (1->3)-beta-D-glucan binding | 1.78E-03 |
| 42 | GO:0000254: C-4 methylsterol oxidase activity | 1.78E-03 |
| 43 | GO:0048027: mRNA 5'-UTR binding | 1.78E-03 |
| 44 | GO:0035529: NADH pyrophosphatase activity | 1.78E-03 |
| 45 | GO:0003999: adenine phosphoribosyltransferase activity | 1.78E-03 |
| 46 | GO:0003841: 1-acylglycerol-3-phosphate O-acyltransferase activity | 2.38E-03 |
| 47 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.38E-03 |
| 48 | GO:0004737: pyruvate decarboxylase activity | 2.38E-03 |
| 49 | GO:0008409: 5'-3' exonuclease activity | 2.38E-03 |
| 50 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 2.38E-03 |
| 51 | GO:0004084: branched-chain-amino-acid transaminase activity | 2.38E-03 |
| 52 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.38E-03 |
| 53 | GO:0004040: amidase activity | 3.05E-03 |
| 54 | GO:0016846: carbon-sulfur lyase activity | 3.05E-03 |
| 55 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 3.05E-03 |
| 56 | GO:0004366: glycerol-3-phosphate O-acyltransferase activity | 3.76E-03 |
| 57 | GO:0016208: AMP binding | 3.76E-03 |
| 58 | GO:0042578: phosphoric ester hydrolase activity | 3.76E-03 |
| 59 | GO:0016462: pyrophosphatase activity | 3.76E-03 |
| 60 | GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity | 3.76E-03 |
| 61 | GO:0030976: thiamine pyrophosphate binding | 3.76E-03 |
| 62 | GO:0004709: MAP kinase kinase kinase activity | 3.76E-03 |
| 63 | GO:0000293: ferric-chelate reductase activity | 3.76E-03 |
| 64 | GO:0000210: NAD+ diphosphatase activity | 3.76E-03 |
| 65 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 4.54E-03 |
| 66 | GO:0016832: aldehyde-lyase activity | 4.54E-03 |
| 67 | GO:0004017: adenylate kinase activity | 4.54E-03 |
| 68 | GO:0016746: transferase activity, transferring acyl groups | 5.12E-03 |
| 69 | GO:0016791: phosphatase activity | 5.28E-03 |
| 70 | GO:0043022: ribosome binding | 6.22E-03 |
| 71 | GO:0052689: carboxylic ester hydrolase activity | 6.48E-03 |
| 72 | GO:0030247: polysaccharide binding | 7.43E-03 |
| 73 | GO:0004252: serine-type endopeptidase activity | 7.50E-03 |
| 74 | GO:0008236: serine-type peptidase activity | 7.82E-03 |
| 75 | GO:0015238: drug transmembrane transporter activity | 8.66E-03 |
| 76 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.12E-02 |
| 77 | GO:0016301: kinase activity | 1.13E-02 |
| 78 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 1.15E-02 |
| 79 | GO:0005262: calcium channel activity | 1.35E-02 |
| 80 | GO:0008131: primary amine oxidase activity | 1.48E-02 |
| 81 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.48E-02 |
| 82 | GO:0005217: intracellular ligand-gated ion channel activity | 1.60E-02 |
| 83 | GO:0004970: ionotropic glutamate receptor activity | 1.60E-02 |
| 84 | GO:0003887: DNA-directed DNA polymerase activity | 1.73E-02 |
| 85 | GO:0016788: hydrolase activity, acting on ester bonds | 1.77E-02 |
| 86 | GO:0003714: transcription corepressor activity | 1.86E-02 |
| 87 | GO:0005528: FK506 binding | 1.86E-02 |
| 88 | GO:0003777: microtubule motor activity | 2.02E-02 |
| 89 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.13E-02 |
| 90 | GO:0004871: signal transducer activity | 3.01E-02 |
| 91 | GO:0001085: RNA polymerase II transcription factor binding | 3.04E-02 |
| 92 | GO:0010181: FMN binding | 3.20E-02 |
| 93 | GO:0005355: glucose transmembrane transporter activity | 3.20E-02 |
| 94 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.87E-02 |
| 95 | GO:0008565: protein transporter activity | 3.89E-02 |
| 96 | GO:0046872: metal ion binding | 4.05E-02 |
| 97 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.22E-02 |
| 98 | GO:0015297: antiporter activity | 4.28E-02 |