Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G27440

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061635: regulation of protein complex stability0.00E+00
2GO:0019265: glycine biosynthetic process, by transamination of glyoxylate0.00E+00
3GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
4GO:0015979: photosynthesis4.89E-18
5GO:0032544: plastid translation1.14E-09
6GO:0009768: photosynthesis, light harvesting in photosystem I4.52E-08
7GO:0010196: nonphotochemical quenching1.23E-07
8GO:0009735: response to cytokinin3.99E-07
9GO:0090391: granum assembly9.50E-07
10GO:0018298: protein-chromophore linkage1.29E-06
11GO:0009854: oxidative photosynthetic carbon pathway1.63E-05
12GO:0015995: chlorophyll biosynthetic process4.20E-05
13GO:0010218: response to far red light5.73E-05
14GO:0080093: regulation of photorespiration6.58E-05
15GO:0031998: regulation of fatty acid beta-oxidation6.58E-05
16GO:0009637: response to blue light7.09E-05
17GO:0009773: photosynthetic electron transport in photosystem I8.19E-05
18GO:0010114: response to red light1.04E-04
19GO:0019253: reductive pentose-phosphate cycle1.27E-04
20GO:0030388: fructose 1,6-bisphosphate metabolic process1.59E-04
21GO:0010275: NAD(P)H dehydrogenase complex assembly1.59E-04
22GO:0006518: peptide metabolic process2.69E-04
23GO:0006000: fructose metabolic process2.69E-04
24GO:0042631: cellular response to water deprivation3.43E-04
25GO:0006165: nucleoside diphosphate phosphorylation3.90E-04
26GO:0006228: UTP biosynthetic process3.90E-04
27GO:0006241: CTP biosynthetic process3.90E-04
28GO:0006633: fatty acid biosynthetic process4.66E-04
29GO:0015976: carbon utilization5.20E-04
30GO:0009765: photosynthesis, light harvesting5.20E-04
31GO:0006183: GTP biosynthetic process5.20E-04
32GO:0045727: positive regulation of translation5.20E-04
33GO:0006536: glutamate metabolic process5.20E-04
34GO:0006412: translation5.41E-04
35GO:0006656: phosphatidylcholine biosynthetic process6.60E-04
36GO:0043097: pyrimidine nucleoside salvage6.60E-04
37GO:0006097: glyoxylate cycle6.60E-04
38GO:0016311: dephosphorylation8.01E-04
39GO:0006206: pyrimidine nucleobase metabolic process8.06E-04
40GO:0050665: hydrogen peroxide biosynthetic process8.06E-04
41GO:0009658: chloroplast organization9.04E-04
42GO:0009853: photorespiration1.05E-03
43GO:0009645: response to low light intensity stimulus1.12E-03
44GO:0009642: response to light intensity1.29E-03
45GO:0006002: fructose 6-phosphate metabolic process1.47E-03
46GO:0071482: cellular response to light stimulus1.47E-03
47GO:0022900: electron transport chain1.47E-03
48GO:0010206: photosystem II repair1.65E-03
49GO:0009245: lipid A biosynthetic process1.65E-03
50GO:0010205: photoinhibition1.85E-03
51GO:0072593: reactive oxygen species metabolic process2.26E-03
52GO:0043085: positive regulation of catalytic activity2.26E-03
53GO:0009750: response to fructose2.26E-03
54GO:0018119: peptidyl-cysteine S-nitrosylation2.26E-03
55GO:0009698: phenylpropanoid metabolic process2.26E-03
56GO:0005983: starch catabolic process2.48E-03
57GO:0006807: nitrogen compound metabolic process2.70E-03
58GO:0006108: malate metabolic process2.70E-03
59GO:0006006: glucose metabolic process2.70E-03
60GO:0006094: gluconeogenesis2.70E-03
61GO:0005986: sucrose biosynthetic process2.70E-03
62GO:0010207: photosystem II assembly2.93E-03
63GO:0006636: unsaturated fatty acid biosynthetic process3.40E-03
64GO:0009411: response to UV4.70E-03
65GO:0042335: cuticle development5.55E-03
66GO:0000413: protein peptidyl-prolyl isomerization5.55E-03
67GO:0006662: glycerol ether metabolic process5.85E-03
68GO:0055072: iron ion homeostasis6.45E-03
69GO:0042254: ribosome biogenesis6.82E-03
70GO:0080167: response to karrikin8.30E-03
71GO:0010027: thylakoid membrane organization8.74E-03
72GO:0009627: systemic acquired resistance9.44E-03
73GO:0042742: defense response to bacterium9.67E-03
74GO:0055114: oxidation-reduction process9.69E-03
75GO:0006869: lipid transport1.09E-02
76GO:0009631: cold acclimation1.17E-02
77GO:0007568: aging1.17E-02
78GO:0006865: amino acid transport1.20E-02
79GO:0034599: cellular response to oxidative stress1.28E-02
80GO:0006099: tricarboxylic acid cycle1.28E-02
81GO:0042542: response to hydrogen peroxide1.45E-02
82GO:0009644: response to high light intensity1.57E-02
83GO:0006364: rRNA processing1.84E-02
84GO:0009585: red, far-red light phototransduction1.84E-02
85GO:0006096: glycolytic process2.07E-02
86GO:0009058: biosynthetic process2.88E-02
87GO:0007623: circadian rhythm3.49E-02
88GO:0010150: leaf senescence3.49E-02
RankGO TermAdjusted P value
1GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
2GO:0004760: serine-pyruvate transaminase activity0.00E+00
3GO:0052667: phosphomethylethanolamine N-methyltransferase activity0.00E+00
4GO:0008974: phosphoribulokinase activity0.00E+00
5GO:0008465: glycerate dehydrogenase activity0.00E+00
6GO:0046408: chlorophyll synthetase activity0.00E+00
7GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
8GO:0050281: serine-glyoxylate transaminase activity0.00E+00
9GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
10GO:0031409: pigment binding2.76E-08
11GO:0016168: chlorophyll binding8.02E-07
12GO:0019843: rRNA binding2.40E-05
13GO:0003735: structural constituent of ribosome4.74E-05
14GO:0045485: omega-6 fatty acid desaturase activity6.58E-05
15GO:0009374: biotin binding6.58E-05
16GO:0051537: 2 iron, 2 sulfur cluster binding1.16E-04
17GO:0008266: poly(U) RNA binding1.27E-04
18GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.59E-04
19GO:0000234: phosphoethanolamine N-methyltransferase activity1.59E-04
20GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity1.59E-04
21GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.59E-04
22GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.69E-04
23GO:0016851: magnesium chelatase activity3.90E-04
24GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.90E-04
25GO:0004550: nucleoside diphosphate kinase activity3.90E-04
26GO:0004351: glutamate decarboxylase activity3.90E-04
27GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.90E-04
28GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.90E-04
29GO:0008891: glycolate oxidase activity5.20E-04
30GO:0008453: alanine-glyoxylate transaminase activity5.20E-04
31GO:0003989: acetyl-CoA carboxylase activity6.60E-04
32GO:0031177: phosphopantetheine binding8.06E-04
33GO:0016615: malate dehydrogenase activity8.06E-04
34GO:0030060: L-malate dehydrogenase activity9.59E-04
35GO:0004849: uridine kinase activity9.59E-04
36GO:0000035: acyl binding9.59E-04
37GO:0003993: acid phosphatase activity1.10E-03
38GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process1.29E-03
39GO:0051287: NAD binding1.61E-03
40GO:0008047: enzyme activator activity2.05E-03
41GO:0009055: electron carrier activity2.09E-03
42GO:0046872: metal ion binding2.18E-03
43GO:0004089: carbonate dehydratase activity2.70E-03
44GO:0043424: protein histidine kinase binding3.90E-03
45GO:0047134: protein-disulfide reductase activity5.26E-03
46GO:0010181: FMN binding6.15E-03
47GO:0050662: coenzyme binding6.15E-03
48GO:0004791: thioredoxin-disulfide reductase activity6.15E-03
49GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor7.40E-03
50GO:0004222: metalloendopeptidase activity1.13E-02
51GO:0050661: NADP binding1.36E-02
52GO:0016491: oxidoreductase activity1.37E-02
53GO:0004185: serine-type carboxypeptidase activity1.49E-02
54GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.66E-02
55GO:0008289: lipid binding1.71E-02
56GO:0015171: amino acid transmembrane transporter activity1.98E-02
57GO:0005515: protein binding1.99E-02
58GO:0015035: protein disulfide oxidoreductase activity2.41E-02
59GO:0030170: pyridoxal phosphate binding2.99E-02
60GO:0004252: serine-type endopeptidase activity2.99E-02
61GO:0042802: identical protein binding4.13E-02
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Gene type



Gene DE type