Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G27430

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process0.00E+00
2GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process0.00E+00
3GO:1905157: positive regulation of photosynthesis0.00E+00
4GO:0006982: response to lipid hydroperoxide0.00E+00
5GO:0010335: response to non-ionic osmotic stress0.00E+00
6GO:1902171: regulation of tocopherol cyclase activity0.00E+00
7GO:1901918: negative regulation of exoribonuclease activity0.00E+00
8GO:0016553: base conversion or substitution editing0.00E+00
9GO:0090279: regulation of calcium ion import0.00E+00
10GO:0033494: ferulate metabolic process0.00E+00
11GO:0090470: shoot organ boundary specification0.00E+00
12GO:2000042: negative regulation of double-strand break repair via homologous recombination0.00E+00
13GO:1903508: positive regulation of nucleic acid-templated transcription0.00E+00
14GO:0071474: cellular hyperosmotic response0.00E+00
15GO:0006021: inositol biosynthetic process1.27E-06
16GO:0055114: oxidation-reduction process1.37E-05
17GO:0015995: chlorophyll biosynthetic process1.98E-05
18GO:0010143: cutin biosynthetic process1.61E-04
19GO:0044550: secondary metabolite biosynthetic process1.71E-04
20GO:0009904: chloroplast accumulation movement1.80E-04
21GO:0046855: inositol phosphate dephosphorylation2.55E-04
22GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway2.55E-04
23GO:0009903: chloroplast avoidance movement3.43E-04
24GO:0046167: glycerol-3-phosphate biosynthetic process4.51E-04
25GO:0043007: maintenance of rDNA4.51E-04
26GO:1902458: positive regulation of stomatal opening4.51E-04
27GO:0034337: RNA folding4.51E-04
28GO:0010362: negative regulation of anion channel activity by blue light4.51E-04
29GO:0015969: guanosine tetraphosphate metabolic process4.51E-04
30GO:0009090: homoserine biosynthetic process4.51E-04
31GO:1902478: negative regulation of defense response to bacterium, incompatible interaction4.51E-04
32GO:0031426: polycistronic mRNA processing4.51E-04
33GO:0043489: RNA stabilization4.51E-04
34GO:0000481: maturation of 5S rRNA4.51E-04
35GO:0006659: phosphatidylserine biosynthetic process4.51E-04
36GO:0043953: protein transport by the Tat complex4.51E-04
37GO:0010426: DNA methylation on cytosine within a CHH sequence4.51E-04
38GO:0065002: intracellular protein transmembrane transport4.51E-04
39GO:0043686: co-translational protein modification4.51E-04
40GO:0043087: regulation of GTPase activity4.51E-04
41GO:0071461: cellular response to redox state4.51E-04
42GO:0006631: fatty acid metabolic process5.22E-04
43GO:0016559: peroxisome fission5.51E-04
44GO:0007155: cell adhesion5.51E-04
45GO:0007018: microtubule-based movement7.02E-04
46GO:0009791: post-embryonic development7.68E-04
47GO:0006650: glycerophospholipid metabolic process9.73E-04
48GO:0010155: regulation of proton transport9.73E-04
49GO:1903426: regulation of reactive oxygen species biosynthetic process9.73E-04
50GO:0015790: UDP-xylose transport9.73E-04
51GO:0051262: protein tetramerization9.73E-04
52GO:0080005: photosystem stoichiometry adjustment9.73E-04
53GO:0042819: vitamin B6 biosynthetic process9.73E-04
54GO:0010541: acropetal auxin transport9.73E-04
55GO:0006435: threonyl-tRNA aminoacylation9.73E-04
56GO:0010027: thylakoid membrane organization1.33E-03
57GO:0006790: sulfur compound metabolic process1.45E-03
58GO:0016024: CDP-diacylglycerol biosynthetic process1.45E-03
59GO:0046621: negative regulation of organ growth1.58E-03
60GO:0000913: preprophase band assembly1.58E-03
61GO:0031022: nuclear migration along microfilament1.58E-03
62GO:0034051: negative regulation of plant-type hypersensitive response1.58E-03
63GO:0046168: glycerol-3-phosphate catabolic process1.58E-03
64GO:0080055: low-affinity nitrate transport1.58E-03
65GO:0044375: regulation of peroxisome size1.58E-03
66GO:0010160: formation of animal organ boundary1.58E-03
67GO:0009658: chloroplast organization1.75E-03
68GO:0010207: photosystem II assembly1.86E-03
69GO:0046854: phosphatidylinositol phosphorylation2.09E-03
70GO:0042823: pyridoxal phosphate biosynthetic process2.29E-03
71GO:0009067: aspartate family amino acid biosynthetic process2.29E-03
72GO:0010371: regulation of gibberellin biosynthetic process2.29E-03
73GO:0006166: purine ribonucleoside salvage2.29E-03
74GO:0006020: inositol metabolic process2.29E-03
75GO:0009152: purine ribonucleotide biosynthetic process2.29E-03
76GO:0046653: tetrahydrofolate metabolic process2.29E-03
77GO:0010239: chloroplast mRNA processing2.29E-03
78GO:0033014: tetrapyrrole biosynthetic process2.29E-03
79GO:0043481: anthocyanin accumulation in tissues in response to UV light2.29E-03
80GO:0008615: pyridoxine biosynthetic process2.29E-03
81GO:0006072: glycerol-3-phosphate metabolic process2.29E-03
82GO:0006168: adenine salvage2.29E-03
83GO:2001141: regulation of RNA biosynthetic process2.29E-03
84GO:0009637: response to blue light2.52E-03
85GO:0019464: glycine decarboxylation via glycine cleavage system3.08E-03
86GO:2000306: positive regulation of photomorphogenesis3.08E-03
87GO:0015994: chlorophyll metabolic process3.08E-03
88GO:0006546: glycine catabolic process3.08E-03
89GO:0008295: spermidine biosynthetic process3.08E-03
90GO:0048511: rhythmic process3.14E-03
91GO:0031365: N-terminal protein amino acid modification3.95E-03
92GO:0044209: AMP salvage3.95E-03
93GO:0000304: response to singlet oxygen3.95E-03
94GO:0006465: signal peptide processing3.95E-03
95GO:0006564: L-serine biosynthetic process3.95E-03
96GO:0045038: protein import into chloroplast thylakoid membrane3.95E-03
97GO:0009228: thiamine biosynthetic process4.89E-03
98GO:0010264: myo-inositol hexakisphosphate biosynthetic process4.89E-03
99GO:0006655: phosphatidylglycerol biosynthetic process4.89E-03
100GO:0060918: auxin transport4.89E-03
101GO:0045962: positive regulation of development, heterochronic4.89E-03
102GO:0009920: cell plate formation involved in plant-type cell wall biogenesis4.89E-03
103GO:0009643: photosynthetic acclimation4.89E-03
104GO:0006520: cellular amino acid metabolic process5.15E-03
105GO:0045489: pectin biosynthetic process5.15E-03
106GO:0006857: oligopeptide transport5.58E-03
107GO:0009648: photoperiodism5.90E-03
108GO:0048280: vesicle fusion with Golgi apparatus5.90E-03
109GO:0030488: tRNA methylation5.90E-03
110GO:0009088: threonine biosynthetic process5.90E-03
111GO:0008654: phospholipid biosynthetic process5.95E-03
112GO:0006096: glycolytic process6.33E-03
113GO:0009395: phospholipid catabolic process6.98E-03
114GO:0048437: floral organ development6.98E-03
115GO:0006400: tRNA modification6.98E-03
116GO:0032508: DNA duplex unwinding8.12E-03
117GO:2000070: regulation of response to water deprivation8.12E-03
118GO:0050821: protein stabilization8.12E-03
119GO:0042255: ribosome assembly8.12E-03
120GO:0006353: DNA-templated transcription, termination8.12E-03
121GO:0006396: RNA processing8.33E-03
122GO:0009932: cell tip growth9.33E-03
123GO:0071482: cellular response to light stimulus9.33E-03
124GO:0015996: chlorophyll catabolic process9.33E-03
125GO:0007186: G-protein coupled receptor signaling pathway9.33E-03
126GO:0009657: plastid organization9.33E-03
127GO:0009821: alkaloid biosynthetic process1.06E-02
128GO:0051865: protein autoubiquitination1.06E-02
129GO:0090305: nucleic acid phosphodiester bond hydrolysis1.06E-02
130GO:0006098: pentose-phosphate shunt1.06E-02
131GO:0006783: heme biosynthetic process1.06E-02
132GO:0048507: meristem development1.06E-02
133GO:0009638: phototropism1.19E-02
134GO:0006779: porphyrin-containing compound biosynthetic process1.19E-02
135GO:0009086: methionine biosynthetic process1.19E-02
136GO:0015979: photosynthesis1.22E-02
137GO:0009641: shade avoidance1.33E-02
138GO:0010215: cellulose microfibril organization1.33E-02
139GO:0006535: cysteine biosynthetic process from serine1.33E-02
140GO:0006896: Golgi to vacuole transport1.33E-02
141GO:0043069: negative regulation of programmed cell death1.33E-02
142GO:0006811: ion transport1.34E-02
143GO:0007568: aging1.40E-02
144GO:0006633: fatty acid biosynthetic process1.43E-02
145GO:0009089: lysine biosynthetic process via diaminopimelate1.47E-02
146GO:0009773: photosynthetic electron transport in photosystem I1.47E-02
147GO:0006352: DNA-templated transcription, initiation1.47E-02
148GO:0008285: negative regulation of cell proliferation1.47E-02
149GO:0018119: peptidyl-cysteine S-nitrosylation1.47E-02
150GO:0016485: protein processing1.47E-02
151GO:0008361: regulation of cell size1.62E-02
152GO:0045037: protein import into chloroplast stroma1.62E-02
153GO:0010228: vegetative to reproductive phase transition of meristem1.71E-02
154GO:0018107: peptidyl-threonine phosphorylation1.78E-02
155GO:0009725: response to hormone1.78E-02
156GO:0006094: gluconeogenesis1.78E-02
157GO:0009767: photosynthetic electron transport chain1.78E-02
158GO:0030048: actin filament-based movement1.78E-02
159GO:0006006: glucose metabolic process1.78E-02
160GO:0009785: blue light signaling pathway1.78E-02
161GO:0019253: reductive pentose-phosphate cycle1.94E-02
162GO:0009887: animal organ morphogenesis1.94E-02
163GO:0010540: basipetal auxin transport1.94E-02
164GO:0009266: response to temperature stimulus1.94E-02
165GO:0034605: cellular response to heat1.94E-02
166GO:0010020: chloroplast fission1.94E-02
167GO:0010223: secondary shoot formation1.94E-02
168GO:0009640: photomorphogenesis1.99E-02
169GO:0009744: response to sucrose1.99E-02
170GO:0007031: peroxisome organization2.10E-02
171GO:0042343: indole glucosinolate metabolic process2.10E-02
172GO:0019853: L-ascorbic acid biosynthetic process2.10E-02
173GO:0009825: multidimensional cell growth2.10E-02
174GO:0019762: glucosinolate catabolic process2.27E-02
175GO:0010025: wax biosynthetic process2.27E-02
176GO:0042753: positive regulation of circadian rhythm2.27E-02
177GO:0006636: unsaturated fatty acid biosynthetic process2.27E-02
178GO:0019344: cysteine biosynthetic process2.44E-02
179GO:0006289: nucleotide-excision repair2.44E-02
180GO:0010073: meristem maintenance2.62E-02
181GO:0008299: isoprenoid biosynthetic process2.62E-02
182GO:0009768: photosynthesis, light harvesting in photosystem I2.62E-02
183GO:0007017: microtubule-based process2.62E-02
184GO:0098542: defense response to other organism2.81E-02
185GO:0010431: seed maturation2.81E-02
186GO:0031408: oxylipin biosynthetic process2.81E-02
187GO:0006306: DNA methylation2.81E-02
188GO:0016114: terpenoid biosynthetic process2.81E-02
189GO:0080092: regulation of pollen tube growth2.99E-02
190GO:0019748: secondary metabolic process2.99E-02
191GO:0016226: iron-sulfur cluster assembly2.99E-02
192GO:0010227: floral organ abscission3.18E-02
193GO:0009294: DNA mediated transformation3.18E-02
194GO:0071369: cellular response to ethylene stimulus3.18E-02
195GO:0006817: phosphate ion transport3.38E-02
196GO:0048443: stamen development3.38E-02
197GO:0009306: protein secretion3.38E-02
198GO:0019722: calcium-mediated signaling3.38E-02
199GO:0042147: retrograde transport, endosome to Golgi3.58E-02
200GO:0005975: carbohydrate metabolic process3.72E-02
201GO:0042335: cuticle development3.78E-02
202GO:0010182: sugar mediated signaling pathway3.99E-02
203GO:0009741: response to brassinosteroid3.99E-02
204GO:0009958: positive gravitropism3.99E-02
205GO:0009742: brassinosteroid mediated signaling pathway4.04E-02
206GO:0009416: response to light stimulus4.16E-02
207GO:0009646: response to absence of light4.20E-02
208GO:0006623: protein targeting to vacuole4.41E-02
209GO:0010183: pollen tube guidance4.41E-02
210GO:0019252: starch biosynthetic process4.41E-02
211GO:0071555: cell wall organization4.51E-02
212GO:0006891: intra-Golgi vesicle-mediated transport4.63E-02
213GO:0032502: developmental process4.85E-02
214GO:0007264: small GTPase mediated signal transduction4.85E-02
215GO:0010583: response to cyclopentenone4.85E-02
216GO:0016032: viral process4.85E-02
RankGO TermAdjusted P value
1GO:0036033: mediator complex binding0.00E+00
2GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity0.00E+00
3GO:0036361: racemase activity, acting on amino acids and derivatives0.00E+00
4GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
5GO:0050613: delta14-sterol reductase activity0.00E+00
6GO:0016855: racemase and epimerase activity, acting on amino acids and derivatives0.00E+00
7GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity0.00E+00
8GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
9GO:0052832: inositol monophosphate 3-phosphatase activity8.98E-06
10GO:0008934: inositol monophosphate 1-phosphatase activity8.98E-06
11GO:0052833: inositol monophosphate 4-phosphatase activity8.98E-06
12GO:0016851: magnesium chelatase activity6.67E-05
13GO:0016491: oxidoreductase activity1.53E-04
14GO:0000293: ferric-chelate reductase activity2.55E-04
15GO:0004366: glycerol-3-phosphate O-acyltransferase activity2.55E-04
16GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.43E-04
17GO:0031957: very long-chain fatty acid-CoA ligase activity4.51E-04
18GO:0010347: L-galactose-1-phosphate phosphatase activity4.51E-04
19GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity4.51E-04
20GO:0047259: glucomannan 4-beta-mannosyltransferase activity4.51E-04
21GO:0005227: calcium activated cation channel activity4.51E-04
22GO:0080132: fatty acid alpha-hydroxylase activity4.51E-04
23GO:0004325: ferrochelatase activity4.51E-04
24GO:0004328: formamidase activity4.51E-04
25GO:0042586: peptide deformylase activity4.51E-04
26GO:0008017: microtubule binding8.81E-04
27GO:0016887: ATPase activity9.69E-04
28GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity9.73E-04
29GO:0048531: beta-1,3-galactosyltransferase activity9.73E-04
30GO:0042389: omega-3 fatty acid desaturase activity9.73E-04
31GO:0009977: proton motive force dependent protein transmembrane transporter activity9.73E-04
32GO:0004617: phosphoglycerate dehydrogenase activity9.73E-04
33GO:0004766: spermidine synthase activity9.73E-04
34GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity9.73E-04
35GO:0018708: thiol S-methyltransferase activity9.73E-04
36GO:0004081: bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity9.73E-04
37GO:0034432: bis(5'-adenosyl)-pentaphosphatase activity9.73E-04
38GO:0004829: threonine-tRNA ligase activity9.73E-04
39GO:0008728: GTP diphosphokinase activity9.73E-04
40GO:0005464: UDP-xylose transmembrane transporter activity9.73E-04
41GO:0004412: homoserine dehydrogenase activity9.73E-04
42GO:0004512: inositol-3-phosphate synthase activity9.73E-04
43GO:0050017: L-3-cyanoalanine synthase activity9.73E-04
44GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity9.73E-04
45GO:0080045: quercetin 3'-O-glucosyltransferase activity9.73E-04
46GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen1.06E-03
47GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.58E-03
48GO:0070402: NADPH binding1.58E-03
49GO:0008864: formyltetrahydrofolate deformylase activity1.58E-03
50GO:0080054: low-affinity nitrate transmembrane transporter activity1.58E-03
51GO:0005504: fatty acid binding1.58E-03
52GO:0004373: glycogen (starch) synthase activity1.58E-03
53GO:0050734: hydroxycinnamoyltransferase activity1.58E-03
54GO:0003955: NAD(P)H dehydrogenase (quinone) activity1.58E-03
55GO:0003913: DNA photolyase activity1.58E-03
56GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.58E-03
57GO:0004565: beta-galactosidase activity1.65E-03
58GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor2.29E-03
59GO:0004072: aspartate kinase activity2.29E-03
60GO:0004375: glycine dehydrogenase (decarboxylating) activity2.29E-03
61GO:0003999: adenine phosphoribosyltransferase activity2.29E-03
62GO:0048027: mRNA 5'-UTR binding2.29E-03
63GO:0022890: inorganic cation transmembrane transporter activity2.29E-03
64GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides2.29E-03
65GO:0009882: blue light photoreceptor activity2.29E-03
66GO:0003993: acid phosphatase activity2.67E-03
67GO:0001053: plastid sigma factor activity3.08E-03
68GO:0070628: proteasome binding3.08E-03
69GO:0045430: chalcone isomerase activity3.08E-03
70GO:0016987: sigma factor activity3.08E-03
71GO:0009011: starch synthase activity3.08E-03
72GO:0030570: pectate lyase activity3.75E-03
73GO:0035091: phosphatidylinositol binding3.86E-03
74GO:0003727: single-stranded RNA binding4.08E-03
75GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity4.89E-03
76GO:0080046: quercetin 4'-O-glucosyltransferase activity4.89E-03
77GO:0004332: fructose-bisphosphate aldolase activity4.89E-03
78GO:0031593: polyubiquitin binding4.89E-03
79GO:0035673: oligopeptide transmembrane transporter activity4.89E-03
80GO:0016787: hydrolase activity5.01E-03
81GO:0003777: microtubule motor activity5.82E-03
82GO:0005506: iron ion binding5.88E-03
83GO:0009927: histidine phosphotransfer kinase activity5.90E-03
84GO:0004124: cysteine synthase activity5.90E-03
85GO:0051753: mannan synthase activity5.90E-03
86GO:0102391: decanoate--CoA ligase activity5.90E-03
87GO:0005261: cation channel activity5.90E-03
88GO:0003886: DNA (cytosine-5-)-methyltransferase activity5.90E-03
89GO:0020037: heme binding6.18E-03
90GO:0004467: long-chain fatty acid-CoA ligase activity6.98E-03
91GO:0016722: oxidoreductase activity, oxidizing metal ions8.22E-03
92GO:0019825: oxygen binding8.64E-03
93GO:0016597: amino acid binding8.72E-03
94GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water9.33E-03
95GO:0008135: translation factor activity, RNA binding9.33E-03
96GO:0008173: RNA methyltransferase activity9.33E-03
97GO:0071949: FAD binding1.06E-02
98GO:0005525: GTP binding1.14E-02
99GO:0016844: strictosidine synthase activity1.19E-02
100GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity1.19E-02
101GO:0004743: pyruvate kinase activity1.19E-02
102GO:0030955: potassium ion binding1.19E-02
103GO:0005089: Rho guanyl-nucleotide exchange factor activity1.47E-02
104GO:0015386: potassium:proton antiporter activity1.47E-02
105GO:0015198: oligopeptide transporter activity1.62E-02
106GO:0000155: phosphorelay sensor kinase activity1.78E-02
107GO:0008081: phosphoric diester hydrolase activity1.78E-02
108GO:0005315: inorganic phosphate transmembrane transporter activity1.78E-02
109GO:0010329: auxin efflux transmembrane transporter activity1.78E-02
110GO:0003924: GTPase activity1.79E-02
111GO:0008266: poly(U) RNA binding1.94E-02
112GO:0003774: motor activity1.94E-02
113GO:0031624: ubiquitin conjugating enzyme binding1.94E-02
114GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.94E-02
115GO:0004185: serine-type carboxypeptidase activity1.99E-02
116GO:0008146: sulfotransferase activity2.10E-02
117GO:0042802: identical protein binding2.18E-02
118GO:0031409: pigment binding2.27E-02
119GO:0051287: NAD binding2.41E-02
120GO:0051536: iron-sulfur cluster binding2.44E-02
121GO:0043130: ubiquitin binding2.44E-02
122GO:0015079: potassium ion transmembrane transporter activity2.62E-02
123GO:0003690: double-stranded DNA binding2.77E-02
124GO:0016788: hydrolase activity, acting on ester bonds2.86E-02
125GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity2.99E-02
126GO:0016747: transferase activity, transferring acyl groups other than amino-acyl groups3.27E-02
127GO:0052689: carboxylic ester hydrolase activity4.13E-02
128GO:0016853: isomerase activity4.20E-02
129GO:0015299: solute:proton antiporter activity4.20E-02
130GO:0010181: FMN binding4.20E-02
131GO:0004872: receptor activity4.41E-02
132GO:0048038: quinone binding4.63E-02
133GO:0042803: protein homodimerization activity4.82E-02
134GO:0004518: nuclease activity4.85E-02
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Gene type



Gene DE type