Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G27030

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0005996: monosaccharide metabolic process0.00E+00
2GO:0006982: response to lipid hydroperoxide0.00E+00
3GO:0010335: response to non-ionic osmotic stress0.00E+00
4GO:1901918: negative regulation of exoribonuclease activity0.00E+00
5GO:0033231: carbohydrate export0.00E+00
6GO:0010207: photosystem II assembly2.80E-08
7GO:0055114: oxidation-reduction process3.35E-07
8GO:0006094: gluconeogenesis1.30E-06
9GO:0015995: chlorophyll biosynthetic process4.12E-06
10GO:0009658: chloroplast organization1.16E-05
11GO:0019252: starch biosynthetic process2.29E-05
12GO:0042823: pyridoxal phosphate biosynthetic process3.17E-05
13GO:0015994: chlorophyll metabolic process5.68E-05
14GO:0010189: vitamin E biosynthetic process1.78E-04
15GO:0044550: secondary metabolite biosynthetic process1.98E-04
16GO:0030974: thiamine pyrophosphate transport2.94E-04
17GO:0046467: membrane lipid biosynthetic process2.94E-04
18GO:0010426: DNA methylation on cytosine within a CHH sequence2.94E-04
19GO:0051775: response to redox state2.94E-04
20GO:0071277: cellular response to calcium ion2.94E-04
21GO:0009704: de-etiolation2.94E-04
22GO:0043087: regulation of GTPase activity2.94E-04
23GO:0071461: cellular response to redox state2.94E-04
24GO:0046167: glycerol-3-phosphate biosynthetic process2.94E-04
25GO:0034337: RNA folding2.94E-04
26GO:0019510: S-adenosylhomocysteine catabolic process2.94E-04
27GO:1902334: fructose export from vacuole to cytoplasm2.94E-04
28GO:0015969: guanosine tetraphosphate metabolic process2.94E-04
29GO:0015755: fructose transport2.94E-04
30GO:0051180: vitamin transport2.94E-04
31GO:0032259: methylation3.52E-04
32GO:0032544: plastid translation3.62E-04
33GO:0006098: pentose-phosphate shunt4.36E-04
34GO:0033353: S-adenosylmethionine cycle6.45E-04
35GO:0015893: drug transport6.45E-04
36GO:0006650: glycerophospholipid metabolic process6.45E-04
37GO:0030388: fructose 1,6-bisphosphate metabolic process6.45E-04
38GO:0042819: vitamin B6 biosynthetic process6.45E-04
39GO:0080005: photosystem stoichiometry adjustment6.45E-04
40GO:0018119: peptidyl-cysteine S-nitrosylation6.94E-04
41GO:0019253: reductive pentose-phosphate cycle1.01E-03
42GO:0044375: regulation of peroxisome size1.04E-03
43GO:0006081: cellular aldehyde metabolic process1.04E-03
44GO:0006000: fructose metabolic process1.04E-03
45GO:0046168: glycerol-3-phosphate catabolic process1.04E-03
46GO:0007031: peroxisome organization1.13E-03
47GO:0006636: unsaturated fatty acid biosynthetic process1.25E-03
48GO:0008615: pyridoxine biosynthetic process1.50E-03
49GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis1.50E-03
50GO:2001141: regulation of RNA biosynthetic process1.50E-03
51GO:0071484: cellular response to light intensity1.50E-03
52GO:0009152: purine ribonucleotide biosynthetic process1.50E-03
53GO:0046653: tetrahydrofolate metabolic process1.50E-03
54GO:0006107: oxaloacetate metabolic process1.50E-03
55GO:0006072: glycerol-3-phosphate metabolic process1.50E-03
56GO:0006546: glycine catabolic process2.01E-03
57GO:0006734: NADH metabolic process2.01E-03
58GO:0010021: amylopectin biosynthetic process2.01E-03
59GO:0015689: molybdate ion transport2.01E-03
60GO:0045727: positive regulation of translation2.01E-03
61GO:0010600: regulation of auxin biosynthetic process2.01E-03
62GO:0043097: pyrimidine nucleoside salvage2.56E-03
63GO:0035434: copper ion transmembrane transport2.56E-03
64GO:0009107: lipoate biosynthetic process2.56E-03
65GO:0016123: xanthophyll biosynthetic process2.56E-03
66GO:0006465: signal peptide processing2.56E-03
67GO:0006096: glycolytic process2.81E-03
68GO:0009646: response to absence of light2.94E-03
69GO:0010190: cytochrome b6f complex assembly3.16E-03
70GO:0006206: pyrimidine nucleobase metabolic process3.16E-03
71GO:0042549: photosystem II stabilization3.16E-03
72GO:0009920: cell plate formation involved in plant-type cell wall biogenesis3.16E-03
73GO:0006810: transport3.48E-03
74GO:0032502: developmental process3.61E-03
75GO:1901259: chloroplast rRNA processing3.81E-03
76GO:0010019: chloroplast-nucleus signaling pathway3.81E-03
77GO:0010244: response to low fluence blue light stimulus by blue low-fluence system3.81E-03
78GO:0045926: negative regulation of growth3.81E-03
79GO:1900057: positive regulation of leaf senescence4.49E-03
80GO:0050829: defense response to Gram-negative bacterium4.49E-03
81GO:0010161: red light signaling pathway4.49E-03
82GO:1900056: negative regulation of leaf senescence4.49E-03
83GO:0015979: photosynthesis4.61E-03
84GO:0009058: biosynthetic process5.07E-03
85GO:0042255: ribosome assembly5.21E-03
86GO:0006353: DNA-templated transcription, termination5.21E-03
87GO:0009690: cytokinin metabolic process5.21E-03
88GO:0016559: peroxisome fission5.21E-03
89GO:0007155: cell adhesion5.21E-03
90GO:0010928: regulation of auxin mediated signaling pathway5.21E-03
91GO:0010411: xyloglucan metabolic process5.75E-03
92GO:0009657: plastid organization5.98E-03
93GO:0009932: cell tip growth5.98E-03
94GO:0006002: fructose 6-phosphate metabolic process5.98E-03
95GO:0071482: cellular response to light stimulus5.98E-03
96GO:0034765: regulation of ion transmembrane transport6.77E-03
97GO:0090333: regulation of stomatal closure6.77E-03
98GO:0006783: heme biosynthetic process6.77E-03
99GO:0006754: ATP biosynthetic process6.77E-03
100GO:0009821: alkaloid biosynthetic process6.77E-03
101GO:0010206: photosystem II repair6.77E-03
102GO:0007623: circadian rhythm7.15E-03
103GO:0010380: regulation of chlorophyll biosynthetic process7.60E-03
104GO:0010205: photoinhibition7.60E-03
105GO:0006779: porphyrin-containing compound biosynthetic process7.60E-03
106GO:0034599: cellular response to oxidative stress8.45E-03
107GO:0006995: cellular response to nitrogen starvation8.48E-03
108GO:0009688: abscisic acid biosynthetic process8.48E-03
109GO:0043069: negative regulation of programmed cell death8.48E-03
110GO:0006782: protoporphyrinogen IX biosynthetic process8.48E-03
111GO:0043085: positive regulation of catalytic activity9.38E-03
112GO:0006352: DNA-templated transcription, initiation9.38E-03
113GO:0000272: polysaccharide catabolic process9.38E-03
114GO:0009750: response to fructose9.38E-03
115GO:0019684: photosynthesis, light reaction9.38E-03
116GO:0009773: photosynthetic electron transport in photosystem I9.38E-03
117GO:0010114: response to red light1.04E-02
118GO:0042546: cell wall biogenesis1.09E-02
119GO:0006108: malate metabolic process1.13E-02
120GO:0018107: peptidyl-threonine phosphorylation1.13E-02
121GO:0009725: response to hormone1.13E-02
122GO:0009767: photosynthetic electron transport chain1.13E-02
123GO:0005986: sucrose biosynthetic process1.13E-02
124GO:0009266: response to temperature stimulus1.23E-02
125GO:0034605: cellular response to heat1.23E-02
126GO:0042343: indole glucosinolate metabolic process1.33E-02
127GO:0009585: red, far-red light phototransduction1.41E-02
128GO:0009833: plant-type primary cell wall biogenesis1.44E-02
129GO:0006833: water transport1.44E-02
130GO:0019762: glucosinolate catabolic process1.44E-02
131GO:0010025: wax biosynthetic process1.44E-02
132GO:0006825: copper ion transport1.66E-02
133GO:0043086: negative regulation of catalytic activity1.67E-02
134GO:0051260: protein homooligomerization1.78E-02
135GO:0098542: defense response to other organism1.78E-02
136GO:0061077: chaperone-mediated protein folding1.78E-02
137GO:0006306: DNA methylation1.78E-02
138GO:0031408: oxylipin biosynthetic process1.78E-02
139GO:0006730: one-carbon metabolic process1.90E-02
140GO:0007005: mitochondrion organization1.90E-02
141GO:0019748: secondary metabolic process1.90E-02
142GO:0010017: red or far-red light signaling pathway1.90E-02
143GO:0009624: response to nematode2.01E-02
144GO:0006396: RNA processing2.07E-02
145GO:0019722: calcium-mediated signaling2.14E-02
146GO:0009306: protein secretion2.14E-02
147GO:0006817: phosphate ion transport2.14E-02
148GO:0070417: cellular response to cold2.27E-02
149GO:0042391: regulation of membrane potential2.40E-02
150GO:0034220: ion transmembrane transport2.40E-02
151GO:0006606: protein import into nucleus2.40E-02
152GO:0042631: cellular response to water deprivation2.40E-02
153GO:0006662: glycerol ether metabolic process2.53E-02
154GO:0010182: sugar mediated signaling pathway2.53E-02
155GO:0009741: response to brassinosteroid2.53E-02
156GO:0006520: cellular amino acid metabolic process2.53E-02
157GO:0006814: sodium ion transport2.66E-02
158GO:0008654: phospholipid biosynthetic process2.80E-02
159GO:0007264: small GTPase mediated signal transduction3.08E-02
160GO:0010583: response to cyclopentenone3.08E-02
161GO:0005975: carbohydrate metabolic process3.12E-02
162GO:0006633: fatty acid biosynthetic process3.17E-02
163GO:0030163: protein catabolic process3.22E-02
164GO:0007267: cell-cell signaling3.51E-02
165GO:0071805: potassium ion transmembrane transport3.51E-02
166GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.97E-02
167GO:0042128: nitrate assimilation4.13E-02
168GO:0042742: defense response to bacterium4.57E-02
169GO:0071555: cell wall organization4.57E-02
170GO:0030244: cellulose biosynthetic process4.61E-02
171GO:0006499: N-terminal protein myristoylation4.94E-02
172GO:0009407: toxin catabolic process4.94E-02
RankGO TermAdjusted P value
1GO:0009979: 16:0 monogalactosyldiacylglycerol desaturase activity0.00E+00
2GO:0050278: sedoheptulose-bisphosphatase activity0.00E+00
3GO:0033840: NDP-glucose-starch glucosyltransferase activity0.00E+00
4GO:0008974: phosphoribulokinase activity0.00E+00
5GO:0008942: nitrite reductase [NAD(P)H] activity0.00E+00
6GO:0015284: fructose uniporter activity0.00E+00
7GO:0035798: 2-alkenal reductase (NADP+) activity0.00E+00
8GO:0009540: zeaxanthin epoxidase [overall] activity0.00E+00
9GO:0050342: tocopherol O-methyltransferase activity0.00E+00
10GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity0.00E+00
11GO:0030794: (S)-coclaurine-N-methyltransferase activity0.00E+00
12GO:0030504: inorganic diphosphate transmembrane transporter activity0.00E+00
13GO:0046406: magnesium protoporphyrin IX methyltransferase activity0.00E+00
14GO:0046554: malate dehydrogenase (NADP+) activity0.00E+00
15GO:0009673: low-affinity phosphate transmembrane transporter activity0.00E+00
16GO:0045550: geranylgeranyl reductase activity0.00E+00
17GO:0009011: starch synthase activity4.05E-07
18GO:0004332: fructose-bisphosphate aldolase activity1.78E-06
19GO:0016491: oxidoreductase activity1.87E-06
20GO:0018708: thiol S-methyltransferase activity3.96E-06
21GO:0004373: glycogen (starch) synthase activity1.41E-05
22GO:0008746: NAD(P)+ transhydrogenase activity2.94E-04
23GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity2.94E-04
24GO:0035671: enone reductase activity2.94E-04
25GO:0046906: tetrapyrrole binding2.94E-04
26GO:0090422: thiamine pyrophosphate transporter activity2.94E-04
27GO:0004013: adenosylhomocysteinase activity2.94E-04
28GO:0080132: fatty acid alpha-hydroxylase activity2.94E-04
29GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water3.62E-04
30GO:0071949: FAD binding4.36E-04
31GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity6.45E-04
32GO:0005353: fructose transmembrane transporter activity6.45E-04
33GO:0008728: GTP diphosphokinase activity6.45E-04
34GO:0008883: glutamyl-tRNA reductase activity6.45E-04
35GO:0047746: chlorophyllase activity6.45E-04
36GO:0042389: omega-3 fatty acid desaturase activity6.45E-04
37GO:0010297: heteropolysaccharide binding6.45E-04
38GO:0004047: aminomethyltransferase activity6.45E-04
39GO:0033201: alpha-1,4-glucan synthase activity6.45E-04
40GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity6.45E-04
41GO:0005315: inorganic phosphate transmembrane transporter activity8.98E-04
42GO:0004565: beta-galactosidase activity8.98E-04
43GO:0016742: hydroxymethyl-, formyl- and related transferase activity1.04E-03
44GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity1.04E-03
45GO:0004030: aldehyde dehydrogenase [NAD(P)+] activity1.04E-03
46GO:0008864: formyltetrahydrofolate deformylase activity1.04E-03
47GO:0010277: chlorophyllide a oxygenase [overall] activity1.04E-03
48GO:0016992: lipoate synthase activity1.04E-03
49GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor1.50E-03
50GO:0015098: molybdate ion transmembrane transporter activity2.01E-03
51GO:0001053: plastid sigma factor activity2.01E-03
52GO:0042802: identical protein binding2.01E-03
53GO:0016987: sigma factor activity2.01E-03
54GO:0003727: single-stranded RNA binding2.17E-03
55GO:0016702: oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen2.56E-03
56GO:0008168: methyltransferase activity2.56E-03
57GO:0004029: aldehyde dehydrogenase (NAD) activity3.16E-03
58GO:0035673: oligopeptide transmembrane transporter activity3.16E-03
59GO:0042578: phosphoric ester hydrolase activity3.16E-03
60GO:0016615: malate dehydrogenase activity3.16E-03
61GO:0016762: xyloglucan:xyloglucosyl transferase activity3.38E-03
62GO:0048038: quinone binding3.38E-03
63GO:0030060: L-malate dehydrogenase activity3.81E-03
64GO:0003886: DNA (cytosine-5-)-methyltransferase activity3.81E-03
65GO:0005242: inward rectifier potassium channel activity3.81E-03
66GO:0004849: uridine kinase activity3.81E-03
67GO:0019899: enzyme binding4.49E-03
68GO:0019843: rRNA binding4.74E-03
69GO:0005506: iron ion binding4.75E-03
70GO:0005515: protein binding4.99E-03
71GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen5.57E-03
72GO:0016798: hydrolase activity, acting on glycosyl bonds5.75E-03
73GO:0005375: copper ion transmembrane transporter activity5.98E-03
74GO:0046910: pectinesterase inhibitor activity6.54E-03
75GO:0008553: hydrogen-exporting ATPase activity, phosphorylative mechanism6.77E-03
76GO:0016844: strictosidine synthase activity7.60E-03
77GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity7.60E-03
78GO:0030234: enzyme regulator activity8.48E-03
79GO:0015198: oligopeptide transporter activity1.03E-02
80GO:0031072: heat shock protein binding1.13E-02
81GO:0051537: 2 iron, 2 sulfur cluster binding1.13E-02
82GO:0015293: symporter activity1.17E-02
83GO:0051287: NAD binding1.27E-02
84GO:0051119: sugar transmembrane transporter activity1.33E-02
85GO:0003690: double-stranded DNA binding1.46E-02
86GO:0005528: FK506 binding1.55E-02
87GO:0052689: carboxylic ester hydrolase activity1.86E-02
88GO:0016760: cellulose synthase (UDP-forming) activity2.02E-02
89GO:0016757: transferase activity, transferring glycosyl groups2.09E-02
90GO:0008514: organic anion transmembrane transporter activity2.14E-02
91GO:0042803: protein homodimerization activity2.18E-02
92GO:0047134: protein-disulfide reductase activity2.27E-02
93GO:0005249: voltage-gated potassium channel activity2.40E-02
94GO:0030551: cyclic nucleotide binding2.40E-02
95GO:0008080: N-acetyltransferase activity2.53E-02
96GO:0050662: coenzyme binding2.66E-02
97GO:0004791: thioredoxin-disulfide reductase activity2.66E-02
98GO:0019825: oxygen binding2.74E-02
99GO:0004872: receptor activity2.80E-02
100GO:0008565: protein transporter activity3.02E-02
101GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor3.22E-02
102GO:0016791: phosphatase activity3.37E-02
103GO:0016759: cellulose synthase activity3.37E-02
104GO:0008483: transaminase activity3.51E-02
105GO:0016722: oxidoreductase activity, oxidizing metal ions3.51E-02
106GO:0015250: water channel activity3.82E-02
107GO:0004721: phosphoprotein phosphatase activity4.29E-02
108GO:0042626: ATPase activity, coupled to transmembrane movement of substances4.41E-02
109GO:0008757: S-adenosylmethionine-dependent methyltransferase activity4.44E-02
110GO:0005096: GTPase activator activity4.77E-02
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Gene type



Gene DE type