Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G26790

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0010059: positive regulation of atrichoblast fate specification0.00E+00
2GO:0090627: plant epidermal cell differentiation0.00E+00
3GO:0009606: tropism0.00E+00
4GO:0090322: regulation of superoxide metabolic process0.00E+00
5GO:1903224: regulation of endodermal cell differentiation0.00E+00
6GO:0035884: arabinan biosynthetic process0.00E+00
7GO:0002949: tRNA threonylcarbamoyladenosine modification0.00E+00
8GO:0097164: ammonium ion metabolic process0.00E+00
9GO:0080127: fruit septum development0.00E+00
10GO:0045184: establishment of protein localization0.00E+00
11GO:0002103: endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 4.5S-rRNA, 5S-rRNA)0.00E+00
12GO:0031222: arabinan catabolic process0.00E+00
13GO:0042794: rRNA transcription from plastid promoter0.00E+00
14GO:0045014: negative regulation of transcription by glucose0.00E+00
15GO:0046620: regulation of organ growth1.80E-10
16GO:0042793: transcription from plastid promoter1.32E-09
17GO:0009733: response to auxin2.25E-07
18GO:0009734: auxin-activated signaling pathway5.32E-07
19GO:0009658: chloroplast organization1.68E-05
20GO:0009926: auxin polar transport4.42E-05
21GO:0009416: response to light stimulus5.44E-05
22GO:0006518: peptide metabolic process7.02E-05
23GO:1900865: chloroplast RNA modification1.55E-04
24GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway2.05E-04
25GO:2000038: regulation of stomatal complex development2.46E-04
26GO:0009828: plant-type cell wall loosening4.01E-04
27GO:0009913: epidermal cell differentiation5.13E-04
28GO:0040008: regulation of growth6.37E-04
29GO:0019294: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process7.13E-04
30GO:0072684: mitochondrial tRNA 3'-trailer cleavage, endonucleolytic7.13E-04
31GO:1905039: carboxylic acid transmembrane transport7.13E-04
32GO:1905200: gibberellic acid transmembrane transport7.13E-04
33GO:0080112: seed growth7.13E-04
34GO:0090558: plant epidermis development7.13E-04
35GO:0010063: positive regulation of trichoblast fate specification7.13E-04
36GO:1903866: palisade mesophyll development7.13E-04
37GO:0010480: microsporocyte differentiation7.13E-04
38GO:0035987: endodermal cell differentiation7.13E-04
39GO:0006436: tryptophanyl-tRNA aminoacylation7.13E-04
40GO:0015904: tetracycline transport7.13E-04
41GO:0034757: negative regulation of iron ion transport7.13E-04
42GO:0042659: regulation of cell fate specification7.13E-04
43GO:0009451: RNA modification7.33E-04
44GO:0048437: floral organ development8.67E-04
45GO:0042255: ribosome assembly1.08E-03
46GO:0006353: DNA-templated transcription, termination1.08E-03
47GO:0000105: histidine biosynthetic process1.08E-03
48GO:0009657: plastid organization1.31E-03
49GO:0007389: pattern specification process1.31E-03
50GO:1902326: positive regulation of chlorophyll biosynthetic process1.54E-03
51GO:0010569: regulation of double-strand break repair via homologous recombination1.54E-03
52GO:0070981: L-asparagine biosynthetic process1.54E-03
53GO:0010271: regulation of chlorophyll catabolic process1.54E-03
54GO:2000039: regulation of trichome morphogenesis1.54E-03
55GO:0018026: peptidyl-lysine monomethylation1.54E-03
56GO:0071497: cellular response to freezing1.54E-03
57GO:0009662: etioplast organization1.54E-03
58GO:1900033: negative regulation of trichome patterning1.54E-03
59GO:1904143: positive regulation of carotenoid biosynthetic process1.54E-03
60GO:0080009: mRNA methylation1.54E-03
61GO:0006529: asparagine biosynthetic process1.54E-03
62GO:2000123: positive regulation of stomatal complex development1.54E-03
63GO:0010583: response to cyclopentenone2.18E-03
64GO:0006535: cysteine biosynthetic process from serine2.18E-03
65GO:0048829: root cap development2.18E-03
66GO:0006949: syncytium formation2.18E-03
67GO:0009664: plant-type cell wall organization2.42E-03
68GO:0080117: secondary growth2.54E-03
69GO:0090391: granum assembly2.54E-03
70GO:0042780: tRNA 3'-end processing2.54E-03
71GO:0001578: microtubule bundle formation2.54E-03
72GO:0034414: tRNA 3'-trailer cleavage, endonucleolytic2.54E-03
73GO:0090708: specification of plant organ axis polarity2.54E-03
74GO:0010252: auxin homeostasis2.56E-03
75GO:0010027: thylakoid membrane organization3.22E-03
76GO:0010588: cotyledon vascular tissue pattern formation3.30E-03
77GO:0044211: CTP salvage3.69E-03
78GO:0010306: rhamnogalacturonan II biosynthetic process3.69E-03
79GO:0046739: transport of virus in multicellular host3.69E-03
80GO:2000904: regulation of starch metabolic process3.69E-03
81GO:0051289: protein homotetramerization3.69E-03
82GO:0016556: mRNA modification3.69E-03
83GO:0010371: regulation of gibberellin biosynthetic process3.69E-03
84GO:1902476: chloride transmembrane transport3.69E-03
85GO:0010071: root meristem specification3.69E-03
86GO:0051513: regulation of monopolar cell growth3.69E-03
87GO:0010239: chloroplast mRNA processing3.69E-03
88GO:0048481: plant ovule development4.53E-03
89GO:0030104: water homeostasis4.99E-03
90GO:0006221: pyrimidine nucleotide biosynthetic process4.99E-03
91GO:0046656: folic acid biosynthetic process4.99E-03
92GO:0006021: inositol biosynthetic process4.99E-03
93GO:0044206: UMP salvage4.99E-03
94GO:0006346: methylation-dependent chromatin silencing4.99E-03
95GO:1901141: regulation of lignin biosynthetic process4.99E-03
96GO:0006479: protein methylation4.99E-03
97GO:0048629: trichome patterning4.99E-03
98GO:1900864: mitochondrial RNA modification4.99E-03
99GO:0051322: anaphase4.99E-03
100GO:0019344: cysteine biosynthetic process5.18E-03
101GO:0009826: unidimensional cell growth5.62E-03
102GO:0019953: sexual reproduction5.73E-03
103GO:0003333: amino acid transmembrane transport6.31E-03
104GO:0016998: cell wall macromolecule catabolic process6.31E-03
105GO:0030308: negative regulation of cell growth6.42E-03
106GO:0010375: stomatal complex patterning6.42E-03
107GO:0080110: sporopollenin biosynthetic process6.42E-03
108GO:0048497: maintenance of floral organ identity6.42E-03
109GO:0009107: lipoate biosynthetic process6.42E-03
110GO:0016123: xanthophyll biosynthetic process6.42E-03
111GO:0032876: negative regulation of DNA endoreduplication6.42E-03
112GO:0016567: protein ubiquitination7.31E-03
113GO:0009831: plant-type cell wall modification involved in multidimensional cell growth7.55E-03
114GO:0006655: phosphatidylglycerol biosynthetic process7.97E-03
115GO:0016554: cytidine to uridine editing7.97E-03
116GO:1902456: regulation of stomatal opening7.97E-03
117GO:0048831: regulation of shoot system development7.97E-03
118GO:0010315: auxin efflux7.97E-03
119GO:0003006: developmental process involved in reproduction7.97E-03
120GO:0006206: pyrimidine nucleobase metabolic process7.97E-03
121GO:0018258: protein O-linked glycosylation via hydroxyproline7.97E-03
122GO:0009643: photosynthetic acclimation7.97E-03
123GO:0006014: D-ribose metabolic process7.97E-03
124GO:0010405: arabinogalactan protein metabolic process7.97E-03
125GO:0009942: longitudinal axis specification9.65E-03
126GO:0048509: regulation of meristem development9.65E-03
127GO:0046654: tetrahydrofolate biosynthetic process9.65E-03
128GO:1901259: chloroplast rRNA processing9.65E-03
129GO:0030488: tRNA methylation9.65E-03
130GO:2000037: regulation of stomatal complex patterning9.65E-03
131GO:0000079: regulation of cyclin-dependent protein serine/threonine kinase activity9.65E-03
132GO:0010310: regulation of hydrogen peroxide metabolic process9.65E-03
133GO:2000067: regulation of root morphogenesis9.65E-03
134GO:0009955: adaxial/abaxial pattern specification9.65E-03
135GO:0071470: cellular response to osmotic stress9.65E-03
136GO:0010087: phloem or xylem histogenesis9.66E-03
137GO:0010305: leaf vascular tissue pattern formation1.04E-02
138GO:0009741: response to brassinosteroid1.04E-02
139GO:0048544: recognition of pollen1.12E-02
140GO:0009646: response to absence of light1.12E-02
141GO:0006821: chloride transport1.14E-02
142GO:0015937: coenzyme A biosynthetic process1.14E-02
143GO:0009396: folic acid-containing compound biosynthetic process1.14E-02
144GO:0010103: stomatal complex morphogenesis1.14E-02
145GO:0009864: induced systemic resistance, jasmonic acid mediated signaling pathway1.14E-02
146GO:0006955: immune response1.14E-02
147GO:0007050: cell cycle arrest1.14E-02
148GO:0048825: cotyledon development1.20E-02
149GO:0071554: cell wall organization or biogenesis1.29E-02
150GO:0001522: pseudouridine synthesis1.33E-02
151GO:0009642: response to light intensity1.33E-02
152GO:0048766: root hair initiation1.33E-02
153GO:0055075: potassium ion homeostasis1.33E-02
154GO:0052543: callose deposition in cell wall1.33E-02
155GO:0032502: developmental process1.38E-02
156GO:0019430: removal of superoxide radicals1.54E-02
157GO:0007186: G-protein coupled receptor signaling pathway1.54E-02
158GO:0010497: plasmodesmata-mediated intercellular transport1.54E-02
159GO:0032544: plastid translation1.54E-02
160GO:0048367: shoot system development1.61E-02
161GO:0048507: meristem development1.75E-02
162GO:0000373: Group II intron splicing1.75E-02
163GO:0048589: developmental growth1.75E-02
164GO:0000902: cell morphogenesis1.75E-02
165GO:0042761: very long-chain fatty acid biosynthetic process1.97E-02
166GO:2000280: regulation of root development1.97E-02
167GO:0006349: regulation of gene expression by genetic imprinting1.97E-02
168GO:0031425: chloroplast RNA processing1.97E-02
169GO:0009638: phototropism1.97E-02
170GO:0045036: protein targeting to chloroplast2.20E-02
171GO:0006259: DNA metabolic process2.20E-02
172GO:0010048: vernalization response2.20E-02
173GO:0006265: DNA topological change2.44E-02
174GO:0015770: sucrose transport2.44E-02
175GO:0009750: response to fructose2.44E-02
176GO:0048229: gametophyte development2.44E-02
177GO:0010015: root morphogenesis2.44E-02
178GO:0000160: phosphorelay signal transduction system2.58E-02
179GO:0010152: pollen maturation2.68E-02
180GO:0016024: CDP-diacylglycerol biosynthetic process2.68E-02
181GO:0045037: protein import into chloroplast stroma2.68E-02
182GO:0010582: floral meristem determinacy2.68E-02
183GO:0008361: regulation of cell size2.68E-02
184GO:0006790: sulfur compound metabolic process2.68E-02
185GO:0006357: regulation of transcription from RNA polymerase II promoter2.77E-02
186GO:0009058: biosynthetic process2.78E-02
187GO:0030048: actin filament-based movement2.94E-02
188GO:0010102: lateral root morphogenesis2.94E-02
189GO:0009785: blue light signaling pathway2.94E-02
190GO:0009691: cytokinin biosynthetic process2.94E-02
191GO:0010075: regulation of meristem growth2.94E-02
192GO:0009767: photosynthetic electron transport chain2.94E-02
193GO:0006865: amino acid transport2.98E-02
194GO:0006468: protein phosphorylation3.14E-02
195GO:0009790: embryo development3.16E-02
196GO:0006541: glutamine metabolic process3.20E-02
197GO:0010207: photosystem II assembly3.20E-02
198GO:0010020: chloroplast fission3.20E-02
199GO:0006270: DNA replication initiation3.20E-02
200GO:0009934: regulation of meristem structural organization3.20E-02
201GO:0048467: gynoecium development3.20E-02
202GO:0034599: cellular response to oxidative stress3.25E-02
203GO:0080188: RNA-directed DNA methylation3.48E-02
204GO:0009901: anther dehiscence3.48E-02
205GO:0090351: seedling development3.48E-02
206GO:0046854: phosphatidylinositol phosphorylation3.48E-02
207GO:0006071: glycerol metabolic process3.76E-02
208GO:0006833: water transport3.76E-02
209GO:0080147: root hair cell development4.04E-02
210GO:0006418: tRNA aminoacylation for protein translation4.34E-02
211GO:0006874: cellular calcium ion homeostasis4.34E-02
212GO:0010073: meristem maintenance4.34E-02
213GO:0051302: regulation of cell division4.34E-02
214GO:0009739: response to gibberellin4.46E-02
215GO:0006306: DNA methylation4.64E-02
216GO:0010431: seed maturation4.64E-02
217GO:0008380: RNA splicing4.82E-02
218GO:0007275: multicellular organism development4.94E-02
219GO:0031348: negative regulation of defense response4.94E-02
RankGO TermAdjusted P value
1GO:0071633: dihydroceramidase activity0.00E+00
2GO:0061711: N(6)-L-threonylcarbamoyladenine synthase0.00E+00
3GO:0004401: histidinol-phosphatase activity0.00E+00
4GO:0070009: serine-type aminopeptidase activity0.00E+00
5GO:0052834: inositol monophosphate phosphatase activity0.00E+00
6GO:0004519: endonuclease activity1.77E-04
7GO:0004930: G-protein coupled receptor activity2.46E-04
8GO:0004124: cysteine synthase activity6.78E-04
9GO:0004632: phosphopantothenate--cysteine ligase activity7.13E-04
10GO:0042834: peptidoglycan binding7.13E-04
11GO:0008676: 3-deoxy-8-phosphooctulonate synthase activity7.13E-04
12GO:0016422: mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity7.13E-04
13GO:0004156: dihydropteroate synthase activity7.13E-04
14GO:0003848: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity7.13E-04
15GO:0016274: protein-arginine N-methyltransferase activity7.13E-04
16GO:0004071: aspartate-ammonia ligase activity7.13E-04
17GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity7.13E-04
18GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity7.13E-04
19GO:0052381: tRNA dimethylallyltransferase activity7.13E-04
20GO:0004830: tryptophan-tRNA ligase activity7.13E-04
21GO:0010347: L-galactose-1-phosphate phosphatase activity7.13E-04
22GO:0004016: adenylate cyclase activity7.13E-04
23GO:0004400: histidinol-phosphate transaminase activity7.13E-04
24GO:1905201: gibberellin transmembrane transporter activity7.13E-04
25GO:0003727: single-stranded RNA binding1.13E-03
26GO:0003723: RNA binding1.22E-03
27GO:0008173: RNA methyltransferase activity1.31E-03
28GO:0008805: carbon-monoxide oxygenase activity1.54E-03
29GO:0008934: inositol monophosphate 1-phosphatase activity1.54E-03
30GO:0008493: tetracycline transporter activity1.54E-03
31GO:0052833: inositol monophosphate 4-phosphatase activity1.54E-03
32GO:0000179: rRNA (adenine-N6,N6-)-dimethyltransferase activity1.54E-03
33GO:0009884: cytokinin receptor activity1.54E-03
34GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.54E-03
35GO:0017118: lipoyltransferase activity1.54E-03
36GO:0016415: octanoyltransferase activity1.54E-03
37GO:0052832: inositol monophosphate 3-phosphatase activity1.54E-03
38GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.54E-03
39GO:0009672: auxin:proton symporter activity1.86E-03
40GO:0017150: tRNA dihydrouridine synthase activity2.54E-03
41GO:0042781: 3'-tRNA processing endoribonuclease activity2.54E-03
42GO:0016805: dipeptidase activity2.54E-03
43GO:0005034: osmosensor activity2.54E-03
44GO:0003725: double-stranded RNA binding3.30E-03
45GO:0010329: auxin efflux transmembrane transporter activity3.30E-03
46GO:0009041: uridylate kinase activity3.69E-03
47GO:0001872: (1->3)-beta-D-glucan binding3.69E-03
48GO:0004871: signal transducer activity4.03E-03
49GO:0010328: auxin influx transmembrane transporter activity4.99E-03
50GO:0005253: anion channel activity4.99E-03
51GO:0046556: alpha-L-arabinofuranosidase activity4.99E-03
52GO:0016279: protein-lysine N-methyltransferase activity4.99E-03
53GO:0004845: uracil phosphoribosyltransferase activity4.99E-03
54GO:0010011: auxin binding4.99E-03
55GO:0004222: metalloendopeptidase activity5.14E-03
56GO:0004888: transmembrane signaling receptor activity6.42E-03
57GO:0016773: phosphotransferase activity, alcohol group as acceptor6.42E-03
58GO:0070696: transmembrane receptor protein serine/threonine kinase binding6.42E-03
59GO:0008725: DNA-3-methyladenine glycosylase activity6.42E-03
60GO:0019843: rRNA binding6.55E-03
61GO:0030570: pectate lyase activity7.55E-03
62GO:0004784: superoxide dismutase activity7.97E-03
63GO:0005247: voltage-gated chloride channel activity7.97E-03
64GO:0003688: DNA replication origin binding7.97E-03
65GO:0004605: phosphatidate cytidylyltransferase activity7.97E-03
66GO:1990714: hydroxyproline O-galactosyltransferase activity7.97E-03
67GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity9.65E-03
68GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity9.65E-03
69GO:0004849: uridine kinase activity9.65E-03
70GO:0004747: ribokinase activity9.65E-03
71GO:0004656: procollagen-proline 4-dioxygenase activity9.65E-03
72GO:0019900: kinase binding9.65E-03
73GO:0008195: phosphatidate phosphatase activity9.65E-03
74GO:0019901: protein kinase binding1.20E-02
75GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting1.20E-02
76GO:0008865: fructokinase activity1.33E-02
77GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding1.45E-02
78GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity1.54E-02
79GO:0008889: glycerophosphodiester phosphodiesterase activity1.75E-02
80GO:0016413: O-acetyltransferase activity1.77E-02
81GO:0005515: protein binding2.11E-02
82GO:0004673: protein histidine kinase activity2.20E-02
83GO:0008515: sucrose transmembrane transporter activity2.44E-02
84GO:0004022: alcohol dehydrogenase (NAD) activity2.94E-02
85GO:0031072: heat shock protein binding2.94E-02
86GO:0000155: phosphorelay sensor kinase activity2.94E-02
87GO:0009982: pseudouridine synthase activity2.94E-02
88GO:0004674: protein serine/threonine kinase activity2.95E-02
89GO:0003700: transcription factor activity, sequence-specific DNA binding3.00E-02
90GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding3.06E-02
91GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors3.11E-02
92GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.20E-02
93GO:0003774: motor activity3.20E-02
94GO:0005215: transporter activity3.30E-02
95GO:0004970: ionotropic glutamate receptor activity3.48E-02
96GO:0051119: sugar transmembrane transporter activity3.48E-02
97GO:0005217: intracellular ligand-gated ion channel activity3.48E-02
98GO:0031418: L-ascorbic acid binding4.04E-02
99GO:0003677: DNA binding4.05E-02
100GO:0043621: protein self-association4.33E-02
101GO:0005345: purine nucleobase transmembrane transporter activity4.34E-02
102GO:0043424: protein histidine kinase binding4.34E-02
103GO:0015293: symporter activity4.50E-02
104GO:0004707: MAP kinase activity4.64E-02
105GO:0033612: receptor serine/threonine kinase binding4.64E-02
106GO:0008408: 3'-5' exonuclease activity4.64E-02
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Gene type



Gene DE type