GO Enrichment Analysis of Co-expressed Genes with
AT4G25990
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:1901528: hydrogen peroxide mediated signaling pathway involved in stomatal movement | 0.00E+00 |
| 2 | GO:0009946: proximal/distal axis specification | 0.00E+00 |
| 3 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 4 | GO:0006364: rRNA processing | 1.36E-05 |
| 5 | GO:0006401: RNA catabolic process | 3.21E-05 |
| 6 | GO:0006390: transcription from mitochondrial promoter | 8.25E-05 |
| 7 | GO:0006430: lysyl-tRNA aminoacylation | 8.25E-05 |
| 8 | GO:1901529: positive regulation of anion channel activity | 1.97E-04 |
| 9 | GO:0048731: system development | 1.97E-04 |
| 10 | GO:0010338: leaf formation | 3.29E-04 |
| 11 | GO:1901527: abscisic acid-activated signaling pathway involved in stomatal movement | 3.29E-04 |
| 12 | GO:0009102: biotin biosynthetic process | 4.75E-04 |
| 13 | GO:0007276: gamete generation | 4.75E-04 |
| 14 | GO:0007165: signal transduction | 6.00E-04 |
| 15 | GO:0045088: regulation of innate immune response | 6.32E-04 |
| 16 | GO:0009793: embryo development ending in seed dormancy | 7.40E-04 |
| 17 | GO:0009451: RNA modification | 7.88E-04 |
| 18 | GO:0016558: protein import into peroxisome matrix | 8.00E-04 |
| 19 | GO:0048497: maintenance of floral organ identity | 8.00E-04 |
| 20 | GO:0016123: xanthophyll biosynthetic process | 8.00E-04 |
| 21 | GO:0016120: carotene biosynthetic process | 8.00E-04 |
| 22 | GO:0042793: transcription from plastid promoter | 9.77E-04 |
| 23 | GO:0010019: chloroplast-nucleus signaling pathway | 1.16E-03 |
| 24 | GO:0010098: suspensor development | 1.36E-03 |
| 25 | GO:1900056: negative regulation of leaf senescence | 1.36E-03 |
| 26 | GO:0006402: mRNA catabolic process | 1.57E-03 |
| 27 | GO:0010492: maintenance of shoot apical meristem identity | 1.57E-03 |
| 28 | GO:0005978: glycogen biosynthetic process | 1.57E-03 |
| 29 | GO:0009642: response to light intensity | 1.57E-03 |
| 30 | GO:0006353: DNA-templated transcription, termination | 1.57E-03 |
| 31 | GO:0010100: negative regulation of photomorphogenesis | 1.79E-03 |
| 32 | GO:0007389: pattern specification process | 1.79E-03 |
| 33 | GO:0009664: plant-type cell wall organization | 2.24E-03 |
| 34 | GO:0008356: asymmetric cell division | 2.26E-03 |
| 35 | GO:0031425: chloroplast RNA processing | 2.26E-03 |
| 36 | GO:0009641: shade avoidance | 2.51E-03 |
| 37 | GO:0006949: syncytium formation | 2.51E-03 |
| 38 | GO:0006259: DNA metabolic process | 2.51E-03 |
| 39 | GO:0006265: DNA topological change | 2.77E-03 |
| 40 | GO:0009750: response to fructose | 2.77E-03 |
| 41 | GO:0012501: programmed cell death | 3.03E-03 |
| 42 | GO:0009887: animal organ morphogenesis | 3.59E-03 |
| 43 | GO:0010020: chloroplast fission | 3.59E-03 |
| 44 | GO:0009944: polarity specification of adaxial/abaxial axis | 4.48E-03 |
| 45 | GO:0006418: tRNA aminoacylation for protein translation | 4.80E-03 |
| 46 | GO:0030245: cellulose catabolic process | 5.45E-03 |
| 47 | GO:0009831: plant-type cell wall modification involved in multidimensional cell growth | 5.78E-03 |
| 48 | GO:0010091: trichome branching | 6.13E-03 |
| 49 | GO:0042127: regulation of cell proliferation | 6.13E-03 |
| 50 | GO:0009739: response to gibberellin | 6.54E-03 |
| 51 | GO:0008033: tRNA processing | 6.83E-03 |
| 52 | GO:0010501: RNA secondary structure unwinding | 6.83E-03 |
| 53 | GO:0045893: positive regulation of transcription, DNA-templated | 6.90E-03 |
| 54 | GO:0007059: chromosome segregation | 7.57E-03 |
| 55 | GO:0009749: response to glucose | 7.95E-03 |
| 56 | GO:0019252: starch biosynthetic process | 7.95E-03 |
| 57 | GO:0009791: post-embryonic development | 7.95E-03 |
| 58 | GO:0006635: fatty acid beta-oxidation | 8.33E-03 |
| 59 | GO:0032502: developmental process | 8.73E-03 |
| 60 | GO:0009658: chloroplast organization | 9.05E-03 |
| 61 | GO:0030163: protein catabolic process | 9.12E-03 |
| 62 | GO:0006464: cellular protein modification process | 9.53E-03 |
| 63 | GO:0009828: plant-type cell wall loosening | 9.53E-03 |
| 64 | GO:0019760: glucosinolate metabolic process | 9.53E-03 |
| 65 | GO:0009615: response to virus | 1.08E-02 |
| 66 | GO:0015995: chlorophyll biosynthetic process | 1.21E-02 |
| 67 | GO:0016311: dephosphorylation | 1.26E-02 |
| 68 | GO:0048481: plant ovule development | 1.30E-02 |
| 69 | GO:0045892: negative regulation of transcription, DNA-templated | 1.37E-02 |
| 70 | GO:0009744: response to sucrose | 1.84E-02 |
| 71 | GO:0051707: response to other organism | 1.84E-02 |
| 72 | GO:0009965: leaf morphogenesis | 2.00E-02 |
| 73 | GO:0009585: red, far-red light phototransduction | 2.28E-02 |
| 74 | GO:0009908: flower development | 2.67E-02 |
| 75 | GO:0009740: gibberellic acid mediated signaling pathway | 2.80E-02 |
| 76 | GO:0009624: response to nematode | 2.93E-02 |
| 77 | GO:0009742: brassinosteroid mediated signaling pathway | 3.05E-02 |
| 78 | GO:0006351: transcription, DNA-templated | 3.49E-02 |
| 79 | GO:0009790: embryo development | 3.83E-02 |
| 80 | GO:0016036: cellular response to phosphate starvation | 4.11E-02 |
| 81 | GO:0040008: regulation of growth | 4.18E-02 |
| 82 | GO:0006470: protein dephosphorylation | 4.75E-02 |
| 83 | GO:0007166: cell surface receptor signaling pathway | 4.75E-02 |
| 84 | GO:0009617: response to bacterium | 4.89E-02 |
| 85 | GO:0010468: regulation of gene expression | 4.89E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004835: tubulin-tyrosine ligase activity | 0.00E+00 |
| 2 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 3 | GO:0008859: exoribonuclease II activity | 0.00E+00 |
| 4 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 5 | GO:0000979: RNA polymerase II core promoter sequence-specific DNA binding | 0.00E+00 |
| 6 | GO:0034335: DNA supercoiling activity | 8.25E-05 |
| 7 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 8.25E-05 |
| 8 | GO:0004824: lysine-tRNA ligase activity | 8.25E-05 |
| 9 | GO:0000175: 3'-5'-exoribonuclease activity | 1.54E-04 |
| 10 | GO:0003844: 1,4-alpha-glucan branching enzyme activity | 1.97E-04 |
| 11 | GO:0003723: RNA binding | 2.29E-04 |
| 12 | GO:0043169: cation binding | 3.29E-04 |
| 13 | GO:0042803: protein homodimerization activity | 3.54E-04 |
| 14 | GO:0003916: DNA topoisomerase activity | 4.75E-04 |
| 15 | GO:0004556: alpha-amylase activity | 9.77E-04 |
| 16 | GO:0004714: transmembrane receptor protein tyrosine kinase activity | 1.57E-03 |
| 17 | GO:0003918: DNA topoisomerase type II (ATP-hydrolyzing) activity | 1.79E-03 |
| 18 | GO:0004519: endonuclease activity | 3.12E-03 |
| 19 | GO:0003779: actin binding | 3.30E-03 |
| 20 | GO:0008266: poly(U) RNA binding | 3.59E-03 |
| 21 | GO:0008026: ATP-dependent helicase activity | 3.60E-03 |
| 22 | GO:0003712: transcription cofactor activity | 3.88E-03 |
| 23 | GO:0004190: aspartic-type endopeptidase activity | 3.88E-03 |
| 24 | GO:0004540: ribonuclease activity | 5.12E-03 |
| 25 | GO:0008810: cellulase activity | 5.78E-03 |
| 26 | GO:0004812: aminoacyl-tRNA ligase activity | 6.48E-03 |
| 27 | GO:0005102: receptor binding | 6.48E-03 |
| 28 | GO:0016791: phosphatase activity | 9.53E-03 |
| 29 | GO:0004004: ATP-dependent RNA helicase activity | 1.21E-02 |
| 30 | GO:0052689: carboxylic ester hydrolase activity | 1.24E-02 |
| 31 | GO:0005096: GTPase activator activity | 1.35E-02 |
| 32 | GO:0004722: protein serine/threonine phosphatase activity | 1.48E-02 |
| 33 | GO:0003993: acid phosphatase activity | 1.59E-02 |
| 34 | GO:0005524: ATP binding | 2.15E-02 |
| 35 | GO:0003677: DNA binding | 2.24E-02 |
| 36 | GO:0003899: DNA-directed 5'-3' RNA polymerase activity | 2.28E-02 |
| 37 | GO:0004672: protein kinase activity | 2.31E-02 |
| 38 | GO:0008289: lipid binding | 2.32E-02 |
| 39 | GO:0016298: lipase activity | 2.33E-02 |
| 40 | GO:0016874: ligase activity | 2.80E-02 |
| 41 | GO:0043565: sequence-specific DNA binding | 3.65E-02 |
| 42 | GO:0030170: pyridoxal phosphate binding | 3.70E-02 |
| 43 | GO:0004252: serine-type endopeptidase activity | 3.70E-02 |
| 44 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.11E-02 |
| 45 | GO:0005525: GTP binding | 4.83E-02 |