Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25370

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0044249: cellular biosynthetic process0.00E+00
2GO:0090071: negative regulation of ribosome biogenesis0.00E+00
3GO:0010239: chloroplast mRNA processing4.27E-05
4GO:0010236: plastoquinone biosynthetic process7.90E-05
5GO:0042793: transcription from plastid promoter9.99E-05
6GO:0017148: negative regulation of translation1.22E-04
7GO:0019509: L-methionine salvage from methylthioadenosine1.22E-04
8GO:1901259: chloroplast rRNA processing1.22E-04
9GO:0006353: DNA-templated transcription, termination1.70E-04
10GO:0018119: peptidyl-cysteine S-nitrosylation3.06E-04
11GO:0071732: cellular response to nitric oxide4.26E-04
12GO:0071369: cellular response to ethylene stimulus6.23E-04
13GO:0016117: carotenoid biosynthetic process6.93E-04
14GO:0016032: viral process9.12E-04
15GO:0071281: cellular response to iron ion9.50E-04
16GO:0006414: translational elongation1.49E-03
17GO:0006417: regulation of translation2.37E-03
18GO:0006413: translational initiation3.87E-03
19GO:0009451: RNA modification4.13E-03
20GO:0042254: ribosome biogenesis5.55E-03
21GO:0045454: cell redox homeostasis7.20E-03
22GO:0045893: positive regulation of transcription, DNA-templated1.38E-02
23GO:0005975: carbohydrate metabolic process2.77E-02
24GO:0046686: response to cadmium ion2.83E-02
25GO:0009737: response to abscisic acid3.54E-02
26GO:0009793: embryo development ending in seed dormancy3.75E-02
RankGO TermAdjusted P value
1GO:0010357: homogentisate solanesyltransferase activity0.00E+00
2GO:0046523: S-methyl-5-thioribose-1-phosphate isomerase activity0.00E+00
3GO:0010355: homogentisate farnesyltransferase activity0.00E+00
4GO:0010356: homogentisate geranylgeranyltransferase activity0.00E+00
5GO:0016765: transferase activity, transferring alkyl or aryl (other than methyl) groups2.75E-05
6GO:0003746: translation elongation factor activity4.20E-05
7GO:0043023: ribosomal large subunit binding4.27E-05
8GO:0019843: rRNA binding1.50E-04
9GO:0003743: translation initiation factor activity2.48E-04
10GO:0004161: dimethylallyltranstransferase activity3.06E-04
11GO:0016853: isomerase activity8.01E-04
12GO:0004721: phosphoprotein phosphatase activity1.23E-03
13GO:0005525: GTP binding1.64E-03
14GO:0043621: protein self-association1.91E-03
15GO:0003723: RNA binding2.42E-03
16GO:0015035: protein disulfide oxidoreductase activity2.86E-03
17GO:0008026: ATP-dependent helicase activity2.92E-03
18GO:0004722: protein serine/threonine phosphatase activity7.68E-03
19GO:0003924: GTPase activity8.33E-03
20GO:0009055: electron carrier activity8.75E-03
21GO:0004519: endonuclease activity8.83E-03
22GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds1.52E-02
23GO:0003729: mRNA binding2.73E-02
24GO:0003735: structural constituent of ribosome3.37E-02
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Gene type



Gene DE type