Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G25050

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0061635: regulation of protein complex stability0.00E+00
2GO:1901401: regulation of tetrapyrrole metabolic process0.00E+00
3GO:0015979: photosynthesis2.88E-20
4GO:0009768: photosynthesis, light harvesting in photosystem I2.25E-10
5GO:0010196: nonphotochemical quenching2.69E-10
6GO:0090391: granum assembly4.94E-10
7GO:0018298: protein-chromophore linkage1.45E-08
8GO:0010218: response to far red light1.20E-06
9GO:0009637: response to blue light1.63E-06
10GO:0010114: response to red light2.86E-06
11GO:0009642: response to light intensity2.51E-05
12GO:0015995: chlorophyll biosynthetic process3.40E-05
13GO:0010206: photosystem II repair4.03E-05
14GO:0080093: regulation of photorespiration5.94E-05
15GO:0031998: regulation of fatty acid beta-oxidation5.94E-05
16GO:0009735: response to cytokinin6.06E-05
17GO:0043085: positive regulation of catalytic activity7.05E-05
18GO:0018119: peptidyl-cysteine S-nitrosylation7.05E-05
19GO:0010275: NAD(P)H dehydrogenase complex assembly1.44E-04
20GO:0016570: histone modification2.46E-04
21GO:0006662: glycerol ether metabolic process3.24E-04
22GO:0006109: regulation of carbohydrate metabolic process4.78E-04
23GO:0006546: glycine catabolic process4.78E-04
24GO:0015976: carbon utilization4.78E-04
25GO:0019464: glycine decarboxylation via glycine cleavage system4.78E-04
26GO:0009765: photosynthesis, light harvesting4.78E-04
27GO:0010027: thylakoid membrane organization5.73E-04
28GO:0006097: glyoxylate cycle6.05E-04
29GO:0050665: hydrogen peroxide biosynthetic process7.40E-04
30GO:0042254: ribosome biogenesis7.85E-04
31GO:0009854: oxidative photosynthetic carbon pathway8.82E-04
32GO:0034599: cellular response to oxidative stress9.67E-04
33GO:0080167: response to karrikin9.98E-04
34GO:0009645: response to low light intensity stimulus1.03E-03
35GO:0006368: transcription elongation from RNA polymerase II promoter1.03E-03
36GO:0045454: cell redox homeostasis1.25E-03
37GO:0032544: plastid translation1.35E-03
38GO:0022900: electron transport chain1.35E-03
39GO:0006412: translation1.52E-03
40GO:0009698: phenylpropanoid metabolic process2.07E-03
41GO:0009773: photosynthetic electron transport in photosystem I2.07E-03
42GO:0072593: reactive oxygen species metabolic process2.07E-03
43GO:0006108: malate metabolic process2.47E-03
44GO:0006006: glucose metabolic process2.47E-03
45GO:0019253: reductive pentose-phosphate cycle2.68E-03
46GO:0010207: photosystem II assembly2.68E-03
47GO:0040007: growth4.30E-03
48GO:0000413: protein peptidyl-prolyl isomerization5.07E-03
49GO:0009658: chloroplast organization5.86E-03
50GO:0055072: iron ion homeostasis5.89E-03
51GO:0055114: oxidation-reduction process7.01E-03
52GO:0016311: dephosphorylation9.25E-03
53GO:0007568: aging1.06E-02
54GO:0006865: amino acid transport1.10E-02
55GO:0006099: tricarboxylic acid cycle1.17E-02
56GO:0009644: response to high light intensity1.43E-02
57GO:0006812: cation transport1.59E-02
58GO:0043086: negative regulation of catalytic activity1.88E-02
59GO:0006096: glycolytic process1.88E-02
60GO:0009742: brassinosteroid mediated signaling pathway2.24E-02
61GO:0006633: fatty acid biosynthetic process2.97E-02
62GO:0010150: leaf senescence3.17E-02
63GO:0042742: defense response to bacterium3.86E-02
64GO:0009723: response to ethylene4.80E-02
RankGO TermAdjusted P value
1GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity0.00E+00
2GO:0016730: oxidoreductase activity, acting on iron-sulfur proteins as donors0.00E+00
3GO:0015038: glutathione disulfide oxidoreductase activity0.00E+00
4GO:0048529: magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase activity0.00E+00
5GO:0031409: pigment binding1.22E-10
6GO:0016168: chlorophyll binding8.02E-09
7GO:0009374: biotin binding5.94E-05
8GO:0008047: enzyme activator activity5.94E-05
9GO:0051537: 2 iron, 2 sulfur cluster binding9.55E-05
10GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity1.44E-04
11GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity1.44E-04
12GO:1990269: RNA polymerase II C-terminal domain phosphoserine binding1.44E-04
13GO:0016630: protochlorophyllide reductase activity1.44E-04
14GO:0003735: structural constituent of ribosome2.15E-04
15GO:0015035: protein disulfide oxidoreductase activity2.25E-04
16GO:0001076: transcription factor activity, RNA polymerase II transcription factor binding2.46E-04
17GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor2.46E-04
18GO:0047134: protein-disulfide reductase activity2.77E-04
19GO:0004791: thioredoxin-disulfide reductase activity3.49E-04
20GO:0004375: glycine dehydrogenase (decarboxylating) activity3.57E-04
21GO:0016851: magnesium chelatase activity3.57E-04
22GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity3.57E-04
23GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity3.57E-04
24GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity3.57E-04
25GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor4.55E-04
26GO:0008891: glycolate oxidase activity4.78E-04
27GO:0046872: metal ion binding5.27E-04
28GO:0003989: acetyl-CoA carboxylase activity6.05E-04
29GO:0016615: malate dehydrogenase activity7.40E-04
30GO:0030060: L-malate dehydrogenase activity8.82E-04
31GO:0003993: acid phosphatase activity9.67E-04
32GO:0009055: electron carrier activity1.77E-03
33GO:0004089: carbonate dehydratase activity2.47E-03
34GO:0031072: heat shock protein binding2.47E-03
35GO:0019843: rRNA binding2.77E-03
36GO:0004857: enzyme inhibitor activity3.34E-03
37GO:0043424: protein histidine kinase binding3.57E-03
38GO:0003756: protein disulfide isomerase activity4.55E-03
39GO:0010181: FMN binding5.61E-03
40GO:0005509: calcium ion binding7.36E-03
41GO:0016491: oxidoreductase activity1.16E-02
42GO:0050661: NADP binding1.24E-02
43GO:0004185: serine-type carboxypeptidase activity1.35E-02
44GO:0003755: peptidyl-prolyl cis-trans isomerase activity1.51E-02
45GO:0051287: NAD binding1.55E-02
46GO:0015171: amino acid transmembrane transporter activity1.80E-02
47GO:0051082: unfolded protein binding2.15E-02
48GO:0015297: antiporter activity3.07E-02
49GO:0042802: identical protein binding3.76E-02
50GO:0043531: ADP binding4.62E-02
<
Gene type



Gene DE type