Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G24290

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0090359: negative regulation of abscisic acid biosynthetic process0.00E+00
2GO:0033198: response to ATP0.00E+00
3GO:0009312: oligosaccharide biosynthetic process0.00E+00
4GO:0006654: phosphatidic acid biosynthetic process0.00E+00
5GO:0090480: purine nucleotide-sugar transmembrane transport0.00E+00
6GO:0006216: cytidine catabolic process0.00E+00
7GO:0071446: cellular response to salicylic acid stimulus1.88E-04
8GO:1900056: negative regulation of leaf senescence1.88E-04
9GO:0032491: detection of molecule of fungal origin2.55E-04
10GO:0000077: DNA damage checkpoint2.55E-04
11GO:0006623: protein targeting to vacuole2.61E-04
12GO:1900426: positive regulation of defense response to bacterium4.21E-04
13GO:0009816: defense response to bacterium, incompatible interaction5.00E-04
14GO:0040020: regulation of meiotic nuclear division5.64E-04
15GO:0002240: response to molecule of oomycetes origin5.64E-04
16GO:0010115: regulation of abscisic acid biosynthetic process5.64E-04
17GO:0010271: regulation of chlorophyll catabolic process5.64E-04
18GO:0006996: organelle organization5.64E-04
19GO:0046939: nucleotide phosphorylation5.64E-04
20GO:0080151: positive regulation of salicylic acid mediated signaling pathway5.64E-04
21GO:1902066: regulation of cell wall pectin metabolic process5.64E-04
22GO:0006790: sulfur compound metabolic process6.51E-04
23GO:0002237: response to molecule of bacterial origin8.30E-04
24GO:0010498: proteasomal protein catabolic process9.15E-04
25GO:1901672: positive regulation of systemic acquired resistance9.15E-04
26GO:0048586: regulation of long-day photoperiodism, flowering9.15E-04
27GO:0032922: circadian regulation of gene expression9.15E-04
28GO:0051176: positive regulation of sulfur metabolic process9.15E-04
29GO:0015783: GDP-fucose transport9.15E-04
30GO:2001009: regulation of plant-type cell wall cellulose biosynthetic process9.15E-04
31GO:0046854: phosphatidylinositol phosphorylation9.26E-04
32GO:0051707: response to other organism1.20E-03
33GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process1.21E-03
34GO:0000209: protein polyubiquitination1.26E-03
35GO:0010104: regulation of ethylene-activated signaling pathway1.31E-03
36GO:0010306: rhamnogalacturonan II biosynthetic process1.31E-03
37GO:1902290: positive regulation of defense response to oomycetes1.31E-03
38GO:0042787: protein ubiquitination involved in ubiquitin-dependent protein catabolic process1.53E-03
39GO:0033358: UDP-L-arabinose biosynthetic process1.75E-03
40GO:0033356: UDP-L-arabinose metabolic process1.75E-03
41GO:0045227: capsule polysaccharide biosynthetic process1.75E-03
42GO:0045088: regulation of innate immune response1.75E-03
43GO:0009247: glycolipid biosynthetic process2.23E-03
44GO:0098719: sodium ion import across plasma membrane2.23E-03
45GO:0031365: N-terminal protein amino acid modification2.23E-03
46GO:0009435: NAD biosynthetic process2.23E-03
47GO:0006952: defense response2.51E-03
48GO:0018258: protein O-linked glycosylation via hydroxyproline2.75E-03
49GO:0010337: regulation of salicylic acid metabolic process2.75E-03
50GO:0002238: response to molecule of fungal origin2.75E-03
51GO:0009643: photosynthetic acclimation2.75E-03
52GO:0009972: cytidine deamination2.75E-03
53GO:0010405: arabinogalactan protein metabolic process2.75E-03
54GO:0042742: defense response to bacterium3.25E-03
55GO:0052033: pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response3.30E-03
56GO:0050832: defense response to fungus3.67E-03
57GO:0046470: phosphatidylcholine metabolic process3.89E-03
58GO:0080186: developmental vegetative growth3.89E-03
59GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.52E-03
60GO:1900150: regulation of defense response to fungus4.52E-03
61GO:0009850: auxin metabolic process4.52E-03
62GO:0019375: galactolipid biosynthetic process4.52E-03
63GO:0009231: riboflavin biosynthetic process4.52E-03
64GO:0016559: peroxisome fission4.52E-03
65GO:0009751: response to salicylic acid4.86E-03
66GO:0006367: transcription initiation from RNA polymerase II promoter5.18E-03
67GO:0006997: nucleus organization5.18E-03
68GO:0010204: defense response signaling pathway, resistance gene-independent5.18E-03
69GO:2000031: regulation of salicylic acid mediated signaling pathway5.18E-03
70GO:0006499: N-terminal protein myristoylation5.71E-03
71GO:0010332: response to gamma radiation5.86E-03
72GO:0009060: aerobic respiration5.86E-03
73GO:0009056: catabolic process5.86E-03
74GO:0015780: nucleotide-sugar transport5.86E-03
75GO:0048268: clathrin coat assembly6.58E-03
76GO:0048354: mucilage biosynthetic process involved in seed coat development6.58E-03
77GO:0010380: regulation of chlorophyll biosynthetic process6.58E-03
78GO:0008202: steroid metabolic process6.58E-03
79GO:0051453: regulation of intracellular pH6.58E-03
80GO:0009299: mRNA transcription7.33E-03
81GO:0000103: sulfate assimilation7.33E-03
82GO:0043069: negative regulation of programmed cell death7.33E-03
83GO:0009682: induced systemic resistance8.11E-03
84GO:0000266: mitochondrial fission8.92E-03
85GO:0012501: programmed cell death8.92E-03
86GO:0010102: lateral root morphogenesis9.75E-03
87GO:2000028: regulation of photoperiodism, flowering9.75E-03
88GO:0050826: response to freezing9.75E-03
89GO:0055046: microgametogenesis9.75E-03
90GO:0034605: cellular response to heat1.06E-02
91GO:0016567: protein ubiquitination1.06E-02
92GO:0006508: proteolysis1.09E-02
93GO:0006486: protein glycosylation1.14E-02
94GO:0010053: root epidermal cell differentiation1.15E-02
95GO:0009225: nucleotide-sugar metabolic process1.15E-02
96GO:0034976: response to endoplasmic reticulum stress1.24E-02
97GO:0006289: nucleotide-excision repair1.34E-02
98GO:0007165: signal transduction1.36E-02
99GO:0009620: response to fungus1.49E-02
100GO:0006334: nucleosome assembly1.53E-02
101GO:0015031: protein transport1.63E-02
102GO:0009814: defense response, incompatible interaction1.64E-02
103GO:0016226: iron-sulfur cluster assembly1.64E-02
104GO:2000022: regulation of jasmonic acid mediated signaling pathway1.64E-02
105GO:0007005: mitochondrion organization1.64E-02
106GO:0006012: galactose metabolic process1.74E-02
107GO:0009561: megagametogenesis1.85E-02
108GO:0016042: lipid catabolic process1.99E-02
109GO:0042391: regulation of membrane potential2.07E-02
110GO:0008033: tRNA processing2.07E-02
111GO:0006662: glycerol ether metabolic process2.18E-02
112GO:0009753: response to jasmonic acid2.25E-02
113GO:0006814: sodium ion transport2.29E-02
114GO:0010193: response to ozone2.53E-02
115GO:0000302: response to reactive oxygen species2.53E-02
116GO:0016032: viral process2.65E-02
117GO:0010150: leaf senescence2.83E-02
118GO:0071805: potassium ion transmembrane transport3.03E-02
119GO:0009739: response to gibberellin3.16E-02
120GO:0051607: defense response to virus3.16E-02
121GO:0009615: response to virus3.29E-02
122GO:0007275: multicellular organism development3.39E-02
123GO:0009788: negative regulation of abscisic acid-activated signaling pathway3.42E-02
124GO:0006906: vesicle fusion3.56E-02
125GO:0006974: cellular response to DNA damage stimulus3.56E-02
126GO:0009627: systemic acquired resistance3.56E-02
127GO:0006888: ER to Golgi vesicle-mediated transport3.70E-02
128GO:0016311: dephosphorylation3.83E-02
129GO:0030244: cellulose biosynthetic process3.97E-02
130GO:0008219: cell death3.97E-02
131GO:0009738: abscisic acid-activated signaling pathway4.04E-02
132GO:0009832: plant-type cell wall biogenesis4.12E-02
133GO:0009631: cold acclimation4.41E-02
134GO:0010119: regulation of stomatal movement4.41E-02
135GO:0010043: response to zinc ion4.41E-02
136GO:0000724: double-strand break repair via homologous recombination4.55E-02
137GO:0009867: jasmonic acid mediated signaling pathway4.70E-02
138GO:0034599: cellular response to oxidative stress4.85E-02
RankGO TermAdjusted P value
1GO:0047844: deoxycytidine deaminase activity0.00E+00
2GO:0005212: structural constituent of eye lens0.00E+00
3GO:0016312: inositol bisphosphate phosphatase activity0.00E+00
4GO:0034338: short-chain carboxylesterase activity0.00E+00
5GO:0016639: oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor0.00E+00
6GO:0044318: L-aspartate:fumarate oxidoreductase activity0.00E+00
7GO:0055105: ubiquitin-protein transferase inhibitor activity0.00E+00
8GO:0008455: alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity0.00E+00
9GO:0008734: L-aspartate oxidase activity0.00E+00
10GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity1.09E-05
11GO:0070696: transmembrane receptor protein serine/threonine kinase binding7.11E-05
12GO:0035252: UDP-xylosyltransferase activity1.04E-04
13GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity1.43E-04
14GO:0046481: digalactosyldiacylglycerol synthase activity2.55E-04
15GO:0004649: poly(ADP-ribose) glycohydrolase activity2.55E-04
16GO:0070290: N-acylphosphatidylethanolamine-specific phospholipase D activity2.94E-04
17GO:0004630: phospholipase D activity2.94E-04
18GO:0008805: carbon-monoxide oxygenase activity5.64E-04
19GO:0004809: tRNA (guanine-N2-)-methyltransferase activity5.64E-04
20GO:0008686: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity5.64E-04
21GO:0016174: NAD(P)H oxidase activity9.15E-04
22GO:0003935: GTP cyclohydrolase II activity9.15E-04
23GO:0005457: GDP-fucose transmembrane transporter activity9.15E-04
24GO:0000030: mannosyltransferase activity9.15E-04
25GO:0035529: NADH pyrophosphatase activity1.31E-03
26GO:0035250: UDP-galactosyltransferase activity1.31E-03
27GO:0010178: IAA-amino acid conjugate hydrolase activity1.31E-03
28GO:0019201: nucleotide kinase activity1.31E-03
29GO:0050373: UDP-arabinose 4-epimerase activity1.75E-03
30GO:0001075: transcription factor activity, RNA polymerase II core promoter sequence-specific binding involved in preinitiation complex assembly1.75E-03
31GO:0005546: phosphatidylinositol-4,5-bisphosphate binding2.23E-03
32GO:0004623: phospholipase A2 activity2.23E-03
33GO:0047631: ADP-ribose diphosphatase activity2.23E-03
34GO:0047714: galactolipase activity2.75E-03
35GO:0000210: NAD+ diphosphatase activity2.75E-03
36GO:1990714: hydroxyproline O-galactosyltransferase activity2.75E-03
37GO:0061630: ubiquitin protein ligase activity2.96E-03
38GO:0004126: cytidine deaminase activity3.30E-03
39GO:0004012: phospholipid-translocating ATPase activity3.30E-03
40GO:0003978: UDP-glucose 4-epimerase activity3.30E-03
41GO:0004017: adenylate kinase activity3.30E-03
42GO:0004656: procollagen-proline 4-dioxygenase activity3.30E-03
43GO:0008235: metalloexopeptidase activity3.89E-03
44GO:0008375: acetylglucosaminyltransferase activity4.44E-03
45GO:0004869: cysteine-type endopeptidase inhibitor activity4.52E-03
46GO:0004708: MAP kinase kinase activity4.52E-03
47GO:0004806: triglyceride lipase activity4.68E-03
48GO:0008970: phosphatidylcholine 1-acylhydrolase activity5.18E-03
49GO:0008142: oxysterol binding5.18E-03
50GO:0004222: metalloendopeptidase activity5.71E-03
51GO:0030145: manganese ion binding5.99E-03
52GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors6.56E-03
53GO:0005545: 1-phosphatidylinositol binding7.33E-03
54GO:0008047: enzyme activator activity7.33E-03
55GO:0015386: potassium:proton antiporter activity8.11E-03
56GO:0004177: aminopeptidase activity8.11E-03
57GO:0000049: tRNA binding8.92E-03
58GO:0008378: galactosyltransferase activity8.92E-03
59GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism9.75E-03
60GO:0004175: endopeptidase activity1.06E-02
61GO:0003712: transcription cofactor activity1.15E-02
62GO:0030552: cAMP binding1.15E-02
63GO:0004867: serine-type endopeptidase inhibitor activity1.15E-02
64GO:0030553: cGMP binding1.15E-02
65GO:0008134: transcription factor binding1.34E-02
66GO:0031418: L-ascorbic acid binding1.34E-02
67GO:0005216: ion channel activity1.43E-02
68GO:0008408: 3'-5' exonuclease activity1.53E-02
69GO:0003756: protein disulfide isomerase activity1.85E-02
70GO:0004499: N,N-dimethylaniline monooxygenase activity1.85E-02
71GO:0004842: ubiquitin-protein transferase activity1.88E-02
72GO:0047134: protein-disulfide reductase activity1.95E-02
73GO:0005102: receptor binding1.95E-02
74GO:0030551: cyclic nucleotide binding2.07E-02
75GO:0005249: voltage-gated potassium channel activity2.07E-02
76GO:0004527: exonuclease activity2.18E-02
77GO:0003713: transcription coactivator activity2.18E-02
78GO:0030276: clathrin binding2.18E-02
79GO:0004252: serine-type endopeptidase activity2.27E-02
80GO:0016301: kinase activity2.27E-02
81GO:0010181: FMN binding2.29E-02
82GO:0004791: thioredoxin-disulfide reductase activity2.29E-02
83GO:0015385: sodium:proton antiporter activity2.78E-02
84GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor2.78E-02
85GO:0016791: phosphatase activity2.90E-02
86GO:0005509: calcium ion binding3.01E-02
87GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity3.03E-02
88GO:0008237: metallopeptidase activity3.03E-02
89GO:0008194: UDP-glycosyltransferase activity3.16E-02
90GO:0051213: dioxygenase activity3.29E-02
91GO:0008270: zinc ion binding3.50E-02
92GO:0016887: ATPase activity3.56E-02
93GO:0004721: phosphoprotein phosphatase activity3.70E-02
94GO:0005515: protein binding4.49E-02
95GO:0003746: translation elongation factor activity4.70E-02
96GO:0043531: ADP binding4.77E-02
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Gene type



Gene DE type