Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G23770

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0097164: ammonium ion metabolic process0.00E+00
2GO:0015739: sialic acid transport0.00E+00
3GO:0006399: tRNA metabolic process0.00E+00
4GO:0010412: mannan metabolic process0.00E+00
5GO:0071311: cellular response to acetate0.00E+00
6GO:0015843: methylammonium transport0.00E+00
7GO:0031222: arabinan catabolic process0.00E+00
8GO:0070979: protein K11-linked ubiquitination0.00E+00
9GO:0071260: cellular response to mechanical stimulus0.00E+00
10GO:0043488: regulation of mRNA stability0.00E+00
11GO:0061157: mRNA destabilization0.00E+00
12GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin)0.00E+00
13GO:0010068: protoderm histogenesis0.00E+00
14GO:0009157: deoxyribonucleoside monophosphate biosynthetic process0.00E+00
15GO:0007638: mechanosensory behavior0.00E+00
16GO:0006003: fructose 2,6-bisphosphate metabolic process0.00E+00
17GO:0046620: regulation of organ growth2.13E-10
18GO:0009733: response to auxin1.34E-09
19GO:0009734: auxin-activated signaling pathway1.35E-09
20GO:0040008: regulation of growth2.96E-07
21GO:0009658: chloroplast organization2.75E-06
22GO:0009926: auxin polar transport4.77E-06
23GO:0009903: chloroplast avoidance movement3.17E-05
24GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway4.99E-05
25GO:0031022: nuclear migration along microfilament7.44E-05
26GO:0000373: Group II intron splicing1.29E-04
27GO:0009904: chloroplast accumulation movement3.89E-04
28GO:0005992: trehalose biosynthetic process6.76E-04
29GO:2000021: regulation of ion homeostasis7.37E-04
30GO:0006264: mitochondrial DNA replication7.37E-04
31GO:0043609: regulation of carbon utilization7.37E-04
32GO:0033259: plastid DNA replication7.37E-04
33GO:0006436: tryptophanyl-tRNA aminoacylation7.37E-04
34GO:0034080: CENP-A containing nucleosome assembly7.37E-04
35GO:0000066: mitochondrial ornithine transport7.37E-04
36GO:0006177: GMP biosynthetic process7.37E-04
37GO:0051418: microtubule nucleation by microtubule organizing center7.37E-04
38GO:0071028: nuclear mRNA surveillance7.37E-04
39GO:1902265: abscisic acid homeostasis7.37E-04
40GO:0043266: regulation of potassium ion transport7.37E-04
41GO:0010480: microsporocyte differentiation7.37E-04
42GO:0042255: ribosome assembly1.13E-03
43GO:0007389: pattern specification process1.38E-03
44GO:0006002: fructose 6-phosphate metabolic process1.38E-03
45GO:0006423: cysteinyl-tRNA aminoacylation1.59E-03
46GO:0031648: protein destabilization1.59E-03
47GO:0006529: asparagine biosynthetic process1.59E-03
48GO:0031125: rRNA 3'-end processing1.59E-03
49GO:0071051: polyadenylation-dependent snoRNA 3'-end processing1.59E-03
50GO:0034475: U4 snRNA 3'-end processing1.59E-03
51GO:1900871: chloroplast mRNA modification1.59E-03
52GO:0033566: gamma-tubulin complex localization1.59E-03
53GO:0070981: L-asparagine biosynthetic process1.59E-03
54GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation1.59E-03
55GO:0071497: cellular response to freezing1.59E-03
56GO:0009638: phototropism1.96E-03
57GO:0032502: developmental process2.33E-03
58GO:0030154: cell differentiation2.44E-03
59GO:0006760: folic acid-containing compound metabolic process2.63E-03
60GO:0007052: mitotic spindle organization2.63E-03
61GO:0016075: rRNA catabolic process2.63E-03
62GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5'2.63E-03
63GO:0051127: positive regulation of actin nucleation2.63E-03
64GO:1902448: positive regulation of shade avoidance2.63E-03
65GO:0019419: sulfate reduction2.63E-03
66GO:0071230: cellular response to amino acid stimulus2.63E-03
67GO:0031145: anaphase-promoting complex-dependent catabolic process2.63E-03
68GO:0006000: fructose metabolic process2.63E-03
69GO:0006816: calcium ion transport2.66E-03
70GO:0010252: auxin homeostasis2.74E-03
71GO:0006468: protein phosphorylation2.92E-03
72GO:0009767: photosynthetic electron transport chain3.47E-03
73GO:2000012: regulation of auxin polar transport3.47E-03
74GO:0043572: plastid fission3.83E-03
75GO:2001141: regulation of RNA biosynthetic process3.83E-03
76GO:0051415: interphase microtubule nucleation by interphase microtubule organizing center3.83E-03
77GO:0046836: glycolipid transport3.83E-03
78GO:0034508: centromere complex assembly3.83E-03
79GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly3.83E-03
80GO:1902476: chloride transmembrane transport3.83E-03
81GO:0007231: osmosensory signaling pathway3.83E-03
82GO:0030071: regulation of mitotic metaphase/anaphase transition3.83E-03
83GO:0051639: actin filament network formation3.83E-03
84GO:0009226: nucleotide-sugar biosynthetic process3.83E-03
85GO:0048645: animal organ formation3.83E-03
86GO:0044211: CTP salvage3.83E-03
87GO:0015696: ammonium transport3.83E-03
88GO:0046739: transport of virus in multicellular host3.83E-03
89GO:0032981: mitochondrial respiratory chain complex I assembly3.83E-03
90GO:2000904: regulation of starch metabolic process3.83E-03
91GO:0090307: mitotic spindle assembly3.83E-03
92GO:0006164: purine nucleotide biosynthetic process3.83E-03
93GO:0007166: cell surface receptor signaling pathway3.87E-03
94GO:0010020: chloroplast fission3.92E-03
95GO:0090351: seedling development4.41E-03
96GO:0016310: phosphorylation4.48E-03
97GO:0000160: phosphorelay signal transduction system5.17E-03
98GO:0044206: UMP salvage5.18E-03
99GO:0009165: nucleotide biosynthetic process5.18E-03
100GO:1901141: regulation of lignin biosynthetic process5.18E-03
101GO:0015846: polyamine transport5.18E-03
102GO:0051764: actin crosslink formation5.18E-03
103GO:0033500: carbohydrate homeostasis5.18E-03
104GO:0046656: folic acid biosynthetic process5.18E-03
105GO:0046355: mannan catabolic process5.18E-03
106GO:0072488: ammonium transmembrane transport5.18E-03
107GO:0022622: root system development5.18E-03
108GO:0044205: 'de novo' UMP biosynthetic process5.18E-03
109GO:0009902: chloroplast relocation5.18E-03
110GO:0019344: cysteine biosynthetic process5.46E-03
111GO:0009742: brassinosteroid mediated signaling pathway5.50E-03
112GO:0006418: tRNA aminoacylation for protein translation6.04E-03
113GO:0009637: response to blue light6.57E-03
114GO:0006544: glycine metabolic process6.66E-03
115GO:1902183: regulation of shoot apical meristem development6.66E-03
116GO:0016123: xanthophyll biosynthetic process6.66E-03
117GO:0010438: cellular response to sulfur starvation6.66E-03
118GO:0010158: abaxial cell fate specification6.66E-03
119GO:0032876: negative regulation of DNA endoreduplication6.66E-03
120GO:2000022: regulation of jasmonic acid mediated signaling pathway7.29E-03
121GO:0006839: mitochondrial transport7.78E-03
122GO:0018258: protein O-linked glycosylation via hydroxyproline8.27E-03
123GO:0006563: L-serine metabolic process8.27E-03
124GO:0010405: arabinogalactan protein metabolic process8.27E-03
125GO:0009959: negative gravitropism8.27E-03
126GO:0006655: phosphatidylglycerol biosynthetic process8.27E-03
127GO:0006139: nucleobase-containing compound metabolic process8.27E-03
128GO:0042793: transcription from plastid promoter8.27E-03
129GO:0045962: positive regulation of development, heterochronic8.27E-03
130GO:0009117: nucleotide metabolic process8.27E-03
131GO:0006206: pyrimidine nucleobase metabolic process8.27E-03
132GO:0030488: tRNA methylation1.00E-02
133GO:0080086: stamen filament development1.00E-02
134GO:0042372: phylloquinone biosynthetic process1.00E-02
135GO:0009942: longitudinal axis specification1.00E-02
136GO:0046654: tetrahydrofolate biosynthetic process1.00E-02
137GO:0032880: regulation of protein localization1.19E-02
138GO:0010161: red light signaling pathway1.19E-02
139GO:0009610: response to symbiotic fungus1.19E-02
140GO:0006821: chloride transport1.19E-02
141GO:0010050: vegetative phase change1.19E-02
142GO:0048437: floral organ development1.19E-02
143GO:0006400: tRNA modification1.19E-02
144GO:0030307: positive regulation of cell growth1.19E-02
145GO:0007275: multicellular organism development1.20E-02
146GO:0071555: cell wall organization1.25E-02
147GO:0009736: cytokinin-activated signaling pathway1.34E-02
148GO:0006353: DNA-templated transcription, termination1.39E-02
149GO:0070413: trehalose metabolism in response to stress1.39E-02
150GO:0010439: regulation of glucosinolate biosynthetic process1.39E-02
151GO:0001522: pseudouridine synthesis1.39E-02
152GO:0009850: auxin metabolic process1.39E-02
153GO:0009690: cytokinin metabolic process1.39E-02
154GO:0009787: regulation of abscisic acid-activated signaling pathway1.39E-02
155GO:0009704: de-etiolation1.39E-02
156GO:0032875: regulation of DNA endoreduplication1.39E-02
157GO:0010583: response to cyclopentenone1.46E-02
158GO:1901657: glycosyl compound metabolic process1.55E-02
159GO:0010099: regulation of photomorphogenesis1.59E-02
160GO:0071482: cellular response to light stimulus1.59E-02
161GO:0009827: plant-type cell wall modification1.59E-02
162GO:0010100: negative regulation of photomorphogenesis1.59E-02
163GO:0006526: arginine biosynthetic process1.59E-02
164GO:0010497: plasmodesmata-mediated intercellular transport1.59E-02
165GO:0006189: 'de novo' IMP biosynthetic process1.81E-02
166GO:0000902: cell morphogenesis1.81E-02
167GO:0015780: nucleotide-sugar transport1.81E-02
168GO:0051865: protein autoubiquitination1.81E-02
169GO:0009051: pentose-phosphate shunt, oxidative branch1.81E-02
170GO:2000024: regulation of leaf development1.81E-02
171GO:0006783: heme biosynthetic process1.81E-02
172GO:0009740: gibberellic acid mediated signaling pathway1.94E-02
173GO:0008202: steroid metabolic process2.04E-02
174GO:0031425: chloroplast RNA processing2.04E-02
175GO:0042761: very long-chain fatty acid biosynthetic process2.04E-02
176GO:0035999: tetrahydrofolate interconversion2.04E-02
177GO:1900865: chloroplast RNA modification2.04E-02
178GO:0010029: regulation of seed germination2.09E-02
179GO:0009641: shade avoidance2.28E-02
180GO:0009299: mRNA transcription2.28E-02
181GO:0006535: cysteine biosynthetic process from serine2.28E-02
182GO:0000103: sulfate assimilation2.28E-02
183GO:0010411: xyloglucan metabolic process2.33E-02
184GO:0048229: gametophyte development2.53E-02
185GO:0006415: translational termination2.53E-02
186GO:0010015: root morphogenesis2.53E-02
187GO:0009773: photosynthetic electron transport in photosystem I2.53E-02
188GO:0009682: induced systemic resistance2.53E-02
189GO:1903507: negative regulation of nucleic acid-templated transcription2.53E-02
190GO:0006352: DNA-templated transcription, initiation2.53E-02
191GO:0045037: protein import into chloroplast stroma2.79E-02
192GO:0010582: floral meristem determinacy2.79E-02
193GO:0016024: CDP-diacylglycerol biosynthetic process2.79E-02
194GO:0009785: blue light signaling pathway3.05E-02
195GO:0030036: actin cytoskeleton organization3.05E-02
196GO:0010075: regulation of meristem growth3.05E-02
197GO:0009725: response to hormone3.05E-02
198GO:0030048: actin filament-based movement3.05E-02
199GO:0010628: positive regulation of gene expression3.05E-02
200GO:0006006: glucose metabolic process3.05E-02
201GO:0009934: regulation of meristem structural organization3.33E-02
202GO:0010207: photosystem II assembly3.33E-02
203GO:0010143: cutin biosynthetic process3.33E-02
204GO:0006541: glutamine metabolic process3.33E-02
205GO:0010030: positive regulation of seed germination3.61E-02
206GO:0070588: calcium ion transmembrane transport3.61E-02
207GO:0009833: plant-type primary cell wall biogenesis3.90E-02
208GO:0006071: glycerol metabolic process3.90E-02
209GO:0010025: wax biosynthetic process3.90E-02
210GO:0006631: fatty acid metabolic process3.90E-02
211GO:0007623: circadian rhythm4.15E-02
212GO:0007010: cytoskeleton organization4.20E-02
213GO:0010187: negative regulation of seed germination4.20E-02
214GO:0009944: polarity specification of adaxial/abaxial axis4.20E-02
215GO:0051017: actin filament bundle assembly4.20E-02
216GO:0030150: protein import into mitochondrial matrix4.20E-02
217GO:0042546: cell wall biogenesis4.39E-02
218GO:0006825: copper ion transport4.50E-02
219GO:0006874: cellular calcium ion homeostasis4.50E-02
220GO:0008643: carbohydrate transport4.56E-02
221GO:0016998: cell wall macromolecule catabolic process4.81E-02
222GO:0009416: response to light stimulus4.90E-02
223GO:0006855: drug transmembrane transport4.92E-02
RankGO TermAdjusted P value
1GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity0.00E+00
2GO:0004056: argininosuccinate lyase activity0.00E+00
3GO:0019136: deoxynucleoside kinase activity0.00E+00
4GO:0005456: CMP-N-acetylneuraminate transmembrane transporter activity0.00E+00
5GO:0004331: fructose-2,6-bisphosphate 2-phosphatase activity0.00E+00
6GO:0019808: polyamine binding0.00E+00
7GO:0003873: 6-phosphofructo-2-kinase activity0.00E+00
8GO:0015136: sialic acid transmembrane transporter activity0.00E+00
9GO:0008756: o-succinylbenzoate-CoA ligase activity0.00E+00
10GO:0015276: ligand-gated ion channel activity0.00E+00
11GO:0004805: trehalose-phosphatase activity2.10E-04
12GO:0005089: Rho guanyl-nucleotide exchange factor activity2.59E-04
13GO:0016773: phosphotransferase activity, alcohol group as acceptor3.89E-04
14GO:0004675: transmembrane receptor protein serine/threonine kinase activity6.74E-04
15GO:0004830: tryptophan-tRNA ligase activity7.37E-04
16GO:0010313: phytochrome binding7.37E-04
17GO:0050139: nicotinate-N-glucosyltransferase activity7.37E-04
18GO:0004088: carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity7.37E-04
19GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity7.37E-04
20GO:0008066: glutamate receptor activity7.37E-04
21GO:0005290: L-histidine transmembrane transporter activity7.37E-04
22GO:0004008: copper-exporting ATPase activity7.37E-04
23GO:0004071: aspartate-ammonia ligase activity7.37E-04
24GO:0030785: [ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity7.37E-04
25GO:0033946: xyloglucan-specific endo-beta-1,4-glucanase activity7.37E-04
26GO:0003727: single-stranded RNA binding1.21E-03
27GO:0050017: L-3-cyanoalanine synthase activity1.59E-03
28GO:0017118: lipoyltransferase activity1.59E-03
29GO:0004066: asparagine synthase (glutamine-hydrolyzing) activity1.59E-03
30GO:0043425: bHLH transcription factor binding1.59E-03
31GO:0033741: adenylyl-sulfate reductase (glutathione) activity1.59E-03
32GO:0003938: IMP dehydrogenase activity1.59E-03
33GO:0102083: 7,8-dihydromonapterin aldolase activity1.59E-03
34GO:0009973: adenylyl-sulfate reductase activity1.59E-03
35GO:0004817: cysteine-tRNA ligase activity1.59E-03
36GO:0000095: S-adenosyl-L-methionine transmembrane transporter activity1.59E-03
37GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity1.59E-03
38GO:0004150: dihydroneopterin aldolase activity1.59E-03
39GO:0000064: L-ornithine transmembrane transporter activity1.59E-03
40GO:0009672: auxin:proton symporter activity1.96E-03
41GO:0043621: protein self-association2.08E-03
42GO:0000156: phosphorelay response regulator activity2.53E-03
43GO:0070330: aromatase activity2.63E-03
44GO:0052722: fatty acid in-chain hydroxylase activity2.63E-03
45GO:0005262: calcium channel activity3.47E-03
46GO:0010329: auxin efflux transmembrane transporter activity3.47E-03
47GO:0015189: L-lysine transmembrane transporter activity3.83E-03
48GO:0017089: glycolipid transporter activity3.83E-03
49GO:0035529: NADH pyrophosphatase activity3.83E-03
50GO:0000254: C-4 methylsterol oxidase activity3.83E-03
51GO:0017172: cysteine dioxygenase activity3.83E-03
52GO:0015181: arginine transmembrane transporter activity3.83E-03
53GO:0046556: alpha-L-arabinofuranosidase activity5.18E-03
54GO:0001053: plastid sigma factor activity5.18E-03
55GO:0004845: uracil phosphoribosyltransferase activity5.18E-03
56GO:0004345: glucose-6-phosphate dehydrogenase activity5.18E-03
57GO:0008409: 5'-3' exonuclease activity5.18E-03
58GO:0051861: glycolipid binding5.18E-03
59GO:0016985: mannan endo-1,4-beta-mannosidase activity5.18E-03
60GO:0080032: methyl jasmonate esterase activity5.18E-03
61GO:0016987: sigma factor activity5.18E-03
62GO:0043015: gamma-tubulin binding5.18E-03
63GO:0005253: anion channel activity5.18E-03
64GO:0004672: protein kinase activity5.52E-03
65GO:0016301: kinase activity6.02E-03
66GO:0004372: glycine hydroxymethyltransferase activity6.66E-03
67GO:0018685: alkane 1-monooxygenase activity6.66E-03
68GO:0030570: pectate lyase activity7.96E-03
69GO:0016829: lyase activity8.00E-03
70GO:0008519: ammonium transmembrane transporter activity8.27E-03
71GO:0005247: voltage-gated chloride channel activity8.27E-03
72GO:2001070: starch binding8.27E-03
73GO:0004605: phosphatidate cytidylyltransferase activity8.27E-03
74GO:1990714: hydroxyproline O-galactosyltransferase activity8.27E-03
75GO:0004709: MAP kinase kinase kinase activity8.27E-03
76GO:0016208: AMP binding8.27E-03
77GO:0016462: pyrophosphatase activity8.27E-03
78GO:0004674: protein serine/threonine kinase activity8.98E-03
79GO:0004812: aminoacyl-tRNA ligase activity9.41E-03
80GO:0004124: cysteine synthase activity1.00E-02
81GO:0008195: phosphatidate phosphatase activity1.00E-02
82GO:0004849: uridine kinase activity1.00E-02
83GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity1.00E-02
84GO:0003730: mRNA 3'-UTR binding1.00E-02
85GO:0008536: Ran GTPase binding1.10E-02
86GO:0005338: nucleotide-sugar transmembrane transporter activity1.19E-02
87GO:0019899: enzyme binding1.19E-02
88GO:0003872: 6-phosphofructokinase activity1.19E-02
89GO:0005524: ATP binding1.25E-02
90GO:0016762: xyloglucan:xyloglucosyl transferase activity1.36E-02
91GO:0043022: ribosome binding1.39E-02
92GO:0004871: signal transducer activity1.43E-02
93GO:0051015: actin filament binding1.55E-02
94GO:0005375: copper ion transmembrane transporter activity1.59E-02
95GO:0008142: oxysterol binding1.59E-02
96GO:0008173: RNA methyltransferase activity1.59E-02
97GO:0016759: cellulose synthase activity1.66E-02
98GO:0003747: translation release factor activity1.81E-02
99GO:0008889: glycerophosphodiester phosphodiesterase activity1.81E-02
100GO:0004713: protein tyrosine kinase activity2.28E-02
101GO:0016798: hydrolase activity, acting on glycosyl bonds2.33E-02
102GO:0102483: scopolin beta-glucosidase activity2.33E-02
103GO:0008327: methyl-CpG binding2.53E-02
104GO:0008794: arsenate reductase (glutaredoxin) activity2.53E-02
105GO:0015238: drug transmembrane transporter activity2.72E-02
106GO:0000976: transcription regulatory region sequence-specific DNA binding2.79E-02
107GO:0015266: protein channel activity3.05E-02
108GO:0015662: ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism3.05E-02
109GO:0004089: carbonate dehydratase activity3.05E-02
110GO:0031072: heat shock protein binding3.05E-02
111GO:0009982: pseudouridine synthase activity3.05E-02
112GO:0003725: double-stranded RNA binding3.05E-02
113GO:0000175: 3'-5'-exoribonuclease activity3.05E-02
114GO:0004022: alcohol dehydrogenase (NAD) activity3.05E-02
115GO:0004252: serine-type endopeptidase activity3.17E-02
116GO:0008083: growth factor activity3.33E-02
117GO:0042973: glucan endo-1,3-beta-D-glucosidase activity3.33E-02
118GO:0008422: beta-glucosidase activity3.58E-02
119GO:0005217: intracellular ligand-gated ion channel activity3.61E-02
120GO:0004970: ionotropic glutamate receptor activity3.61E-02
121GO:0005215: transporter activity3.67E-02
122GO:0042393: histone binding3.74E-02
123GO:0003887: DNA-directed DNA polymerase activity3.90E-02
124GO:0001135: transcription factor activity, RNA polymerase II transcription factor recruiting4.00E-02
125GO:0005351: sugar:proton symporter activity4.03E-02
126GO:0003714: transcription corepressor activity4.20E-02
127GO:0005528: FK506 binding4.20E-02
128GO:0008017: microtubule binding4.38E-02
129GO:0005345: purine nucleobase transmembrane transporter activity4.50E-02
130GO:0051537: 2 iron, 2 sulfur cluster binding4.56E-02
131GO:0000981: RNA polymerase II transcription factor activity, sequence-specific DNA binding4.67E-02
132GO:0019706: protein-cysteine S-palmitoyltransferase activity4.81E-02
133GO:0008408: 3'-5' exonuclease activity4.81E-02
134GO:0004176: ATP-dependent peptidase activity4.81E-02
135GO:0033612: receptor serine/threonine kinase binding4.81E-02
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Gene type



Gene DE type