co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G22890

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0061635: regulation of protein complex stability	0.00E+00
2	GO:0016118: carotenoid catabolic process	0.00E+00
3	GO:0019265: glycine biosynthetic process, by transamination of glyoxylate	0.00E+00
4	GO:0015979: photosynthesis	1.01E-14
5	GO:0009768: photosynthesis, light harvesting in photosystem I	7.49E-11
6	GO:0018298: protein-chromophore linkage	1.04E-08
7	GO:0032544: plastid translation	1.54E-08
8	GO:0009735: response to cytokinin	1.26E-07
9	GO:0010207: photosystem II assembly	2.11E-07
10	GO:0015995: chlorophyll biosynthetic process	3.45E-07
11	GO:0009645: response to low light intensity stimulus	9.44E-07
12	GO:0090391: granum assembly	4.23E-06
13	GO:0010218: response to far red light	1.78E-05
14	GO:0009637: response to blue light	2.37E-05
15	GO:0010114: response to red light	3.91E-05
16	GO:0010190: cytochrome b6f complex assembly	4.48E-05
17	GO:0010189: vitamin E biosynthetic process	6.27E-05
18	GO:0010196: nonphotochemical quenching	8.40E-05
19	GO:0006810: transport	9.28E-05
20	GO:0080093: regulation of photorespiration	1.52E-04
21	GO:0031998: regulation of fatty acid beta-oxidation	1.52E-04
22	GO:0006412: translation	2.46E-04
23	GO:0009773: photosynthetic electron transport in photosystem I	2.75E-04
24	GO:0016124: xanthophyll catabolic process	3.47E-04
25	GO:0016121: carotene catabolic process	3.47E-04
26	GO:0010275: NAD(P)H dehydrogenase complex assembly	3.47E-04
27	GO:0009767: photosynthetic electron transport chain	3.61E-04
28	GO:0019253: reductive pentose-phosphate cycle	4.07E-04
29	GO:0009644: response to high light intensity	5.32E-04
30	GO:0006518: peptide metabolic process	5.68E-04
31	GO:0042254: ribosome biogenesis	6.68E-04
32	GO:0080158: chloroplast ribulose bisphosphate carboxylase complex biogenesis	8.13E-04
33	GO:0006546: glycine catabolic process	1.08E-03
34	GO:0015976: carbon utilization	1.08E-03
35	GO:0019464: glycine decarboxylation via glycine cleavage system	1.08E-03
36	GO:0009765: photosynthesis, light harvesting	1.08E-03
37	GO:0015994: chlorophyll metabolic process	1.08E-03
38	GO:0006536: glutamate metabolic process	1.08E-03
39	GO:0010600: regulation of auxin biosynthetic process	1.08E-03
40	GO:0010236: plastoquinone biosynthetic process	1.36E-03
41	GO:0006097: glyoxylate cycle	1.36E-03
42	GO:0009107: lipoate biosynthetic process	1.36E-03
43	GO:0006656: phosphatidylcholine biosynthetic process	1.36E-03
44	GO:0043097: pyrimidine nucleoside salvage	1.36E-03
45	GO:0050665: hydrogen peroxide biosynthetic process	1.67E-03
46	GO:0006206: pyrimidine nucleobase metabolic process	1.67E-03
47	GO:0009854: oxidative photosynthetic carbon pathway	2.01E-03
48	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	2.01E-03
49	GO:1900057: positive regulation of leaf senescence	2.36E-03
50	GO:0010928: regulation of auxin mediated signaling pathway	2.73E-03
51	GO:0009642: response to light intensity	2.73E-03
52	GO:0022900: electron transport chain	3.12E-03
53	GO:0010206: photosystem II repair	3.53E-03
54	GO:0006783: heme biosynthetic process	3.53E-03
55	GO:0009245: lipid A biosynthetic process	3.53E-03
56	GO:0009416: response to light stimulus	3.85E-03
57	GO:0006779: porphyrin-containing compound biosynthetic process	3.96E-03
58	GO:0006782: protoporphyrinogen IX biosynthetic process	4.40E-03
59	GO:0043085: positive regulation of catalytic activity	4.86E-03
60	GO:0018119: peptidyl-cysteine S-nitrosylation	4.86E-03
61	GO:0009698: phenylpropanoid metabolic process	4.86E-03
62	GO:0009409: response to cold	4.99E-03
63	GO:0006108: malate metabolic process	5.83E-03
64	GO:0006006: glucose metabolic process	5.83E-03
65	GO:0006094: gluconeogenesis	5.83E-03
66	GO:0006807: nitrogen compound metabolic process	5.83E-03
67	GO:0006096: glycolytic process	6.45E-03
68	GO:0032259: methylation	7.63E-03
69	GO:0009693: ethylene biosynthetic process	1.03E-02
70	GO:0042742: defense response to bacterium	1.12E-02
71	GO:0000413: protein peptidyl-prolyl isomerization	1.22E-02
72	GO:0006606: protein import into nucleus	1.22E-02
73	GO:0006633: fatty acid biosynthetic process	1.22E-02
74	GO:0042335: cuticle development	1.22E-02
75	GO:0006662: glycerol ether metabolic process	1.29E-02
76	GO:0006814: sodium ion transport	1.36E-02
77	GO:0010027: thylakoid membrane organization	1.94E-02
78	GO:0009627: systemic acquired resistance	2.10E-02
79	GO:0016311: dephosphorylation	2.26E-02
80	GO:0080167: response to karrikin	2.59E-02
81	GO:0007568: aging	2.60E-02
82	GO:0009853: photorespiration	2.78E-02
83	GO:0034599: cellular response to oxidative stress	2.86E-02
84	GO:0006099: tricarboxylic acid cycle	2.86E-02
85	GO:0030001: metal ion transport	3.05E-02
86	GO:0055114: oxidation-reduction process	3.09E-02
87	GO:0045454: cell redox homeostasis	3.10E-02
88	GO:0006869: lipid transport	3.39E-02
89	GO:0006812: cation transport	3.91E-02
90	GO:0006979: response to oxidative stress	4.07E-02
91	GO:0006364: rRNA processing	4.11E-02
92	GO:0009585: red, far-red light phototransduction	4.11E-02

Rank	GO Term	Adjusted P value
1	GO:0052667: phosphomethylethanolamine N-methyltransferase activity	0.00E+00
2	GO:0045550: geranylgeranyl reductase activity	0.00E+00
3	GO:0102550: 2-methyl-6-geranylgeranyl-1,4-benzoquinol methyltransferase activity	0.00E+00
4	GO:0008974: phosphoribulokinase activity	0.00E+00
5	GO:0015038: glutathione disulfide oxidoreductase activity	0.00E+00
6	GO:0046408: chlorophyll synthetase activity	0.00E+00
7	GO:0050281: serine-glyoxylate transaminase activity	0.00E+00
8	GO:0046863: ribulose-1,5-bisphosphate carboxylase/oxygenase activator activity	0.00E+00
9	GO:0030504: inorganic diphosphate transmembrane transporter activity	0.00E+00
10	GO:0016754: sinapoylglucose-malate O-sinapoyltransferase activity	0.00E+00
11	GO:0004760: serine-pyruvate transaminase activity	0.00E+00
12	GO:0031409: pigment binding	3.59E-11
13	GO:0016168: chlorophyll binding	5.18E-09
14	GO:0003735: structural constituent of ribosome	7.18E-06
15	GO:0009374: biotin binding	1.52E-04
16	GO:0051741: 2-methyl-6-phytyl-1,4-benzoquinone methyltransferase activity	1.52E-04
17	GO:0019843: rRNA binding	1.94E-04
18	GO:0016630: protochlorophyllide reductase activity	3.47E-04
19	GO:0000234: phosphoethanolamine N-methyltransferase activity	3.47E-04
20	GO:0008883: glutamyl-tRNA reductase activity	3.47E-04
21	GO:0047746: chlorophyllase activity	3.47E-04
22	GO:0047158: sinapoylglucose-sinapoylglucose O-sinapoyltransferase activity	3.47E-04
23	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	3.47E-04
24	GO:0051537: 2 iron, 2 sulfur cluster binding	5.32E-04
25	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	5.68E-04
26	GO:0016992: lipoate synthase activity	5.68E-04
27	GO:0052852: very-long-chain-(S)-2-hydroxy-acid oxidase activity	8.13E-04
28	GO:0008097: 5S rRNA binding	8.13E-04
29	GO:0004351: glutamate decarboxylase activity	8.13E-04
30	GO:0052853: long-chain-(S)-2-hydroxy-long-chain-acid oxidase activity	8.13E-04
31	GO:0052854: medium-chain-(S)-2-hydroxy-acid oxidase activity	8.13E-04
32	GO:0004375: glycine dehydrogenase (decarboxylating) activity	8.13E-04
33	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	8.13E-04
34	GO:0016851: magnesium chelatase activity	8.13E-04
35	GO:0008891: glycolate oxidase activity	1.08E-03
36	GO:0008453: alanine-glyoxylate transaminase activity	1.08E-03
37	GO:0048038: quinone binding	1.34E-03
38	GO:0045549: 9-cis-epoxycarotenoid dioxygenase activity	1.36E-03
39	GO:0003989: acetyl-CoA carboxylase activity	1.36E-03
40	GO:0031177: phosphopantetheine binding	1.67E-03
41	GO:0016615: malate dehydrogenase activity	1.67E-03
42	GO:0004332: fructose-bisphosphate aldolase activity	1.67E-03
43	GO:0009055: electron carrier activity	1.79E-03
44	GO:0004849: uridine kinase activity	2.01E-03
45	GO:0000035: acyl binding	2.01E-03
46	GO:0045156: electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	2.01E-03
47	GO:0030060: L-malate dehydrogenase activity	2.01E-03
48	GO:0000036: ACP phosphopantetheine attachment site binding involved in fatty acid biosynthetic process	2.73E-03
49	GO:0003993: acid phosphatase activity	3.29E-03
50	GO:0050661: NADP binding	3.59E-03
51	GO:0030234: enzyme regulator activity	4.40E-03
52	GO:0008047: enzyme activator activity	4.40E-03
53	GO:0016491: oxidoreductase activity	4.76E-03
54	GO:0005315: inorganic phosphate transmembrane transporter activity	5.83E-03
55	GO:0004089: carbonate dehydratase activity	5.83E-03
56	GO:0031072: heat shock protein binding	5.83E-03
57	GO:0015035: protein disulfide oxidoreductase activity	7.99E-03
58	GO:0043424: protein histidine kinase binding	8.51E-03
59	GO:0008514: organic anion transmembrane transporter activity	1.09E-02
60	GO:0046872: metal ion binding	1.14E-02
61	GO:0047134: protein-disulfide reductase activity	1.16E-02
62	GO:0004791: thioredoxin-disulfide reductase activity	1.36E-02
63	GO:0016853: isomerase activity	1.36E-02
64	GO:0010181: FMN binding	1.36E-02
65	GO:0005515: protein binding	1.43E-02
66	GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	1.64E-02
67	GO:0008168: methyltransferase activity	2.01E-02
68	GO:0008757: S-adenosylmethionine-dependent methyltransferase activity	2.26E-02
69	GO:0043531: ADP binding	2.29E-02
70	GO:0004222: metalloendopeptidase activity	2.51E-02
71	GO:0003746: translation elongation factor activity	2.78E-02
72	GO:0004185: serine-type carboxypeptidase activity	3.32E-02
73	GO:0015293: symporter activity	3.61E-02
74	GO:0003755: peptidyl-prolyl cis-trans isomerase activity	3.71E-02
75	GO:0051287: NAD binding	3.81E-02