GO Enrichment Analysis of Co-expressed Genes with
AT4G22756
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
2 | GO:0042407: cristae formation | 0.00E+00 |
3 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
4 | GO:0010068: protoderm histogenesis | 0.00E+00 |
5 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
6 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
7 | GO:0008618: 7-methylguanosine metabolic process | 0.00E+00 |
8 | GO:0006399: tRNA metabolic process | 0.00E+00 |
9 | GO:0010412: mannan metabolic process | 0.00E+00 |
10 | GO:0036265: RNA (guanine-N7)-methylation | 0.00E+00 |
11 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
12 | GO:0090706: specification of plant organ position | 0.00E+00 |
13 | GO:0009157: deoxyribonucleoside monophosphate biosynthetic process | 0.00E+00 |
14 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
15 | GO:0051322: anaphase | 5.21E-05 |
16 | GO:0009082: branched-chain amino acid biosynthetic process | 1.64E-04 |
17 | GO:0009099: valine biosynthetic process | 1.64E-04 |
18 | GO:0006400: tRNA modification | 2.16E-04 |
19 | GO:0007155: cell adhesion | 2.73E-04 |
20 | GO:0031426: polycistronic mRNA processing | 2.80E-04 |
21 | GO:0071028: nuclear mRNA surveillance | 2.80E-04 |
22 | GO:0043266: regulation of potassium ion transport | 2.80E-04 |
23 | GO:0006659: phosphatidylserine biosynthetic process | 2.80E-04 |
24 | GO:0043087: regulation of GTPase activity | 2.80E-04 |
25 | GO:2000021: regulation of ion homeostasis | 2.80E-04 |
26 | GO:0006264: mitochondrial DNA replication | 2.80E-04 |
27 | GO:0033259: plastid DNA replication | 2.80E-04 |
28 | GO:0048508: embryonic meristem development | 2.80E-04 |
29 | GO:0006177: GMP biosynthetic process | 2.80E-04 |
30 | GO:0010450: inflorescence meristem growth | 2.80E-04 |
31 | GO:0009097: isoleucine biosynthetic process | 3.35E-04 |
32 | GO:0010206: photosystem II repair | 4.05E-04 |
33 | GO:1900865: chloroplast RNA modification | 4.79E-04 |
34 | GO:0009658: chloroplast organization | 5.00E-04 |
35 | GO:0000910: cytokinesis | 5.11E-04 |
36 | GO:1900871: chloroplast mRNA modification | 6.14E-04 |
37 | GO:0009945: radial axis specification | 6.14E-04 |
38 | GO:0007154: cell communication | 6.14E-04 |
39 | GO:0006423: cysteinyl-tRNA aminoacylation | 6.14E-04 |
40 | GO:0031125: rRNA 3'-end processing | 6.14E-04 |
41 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 6.14E-04 |
42 | GO:0006739: NADP metabolic process | 6.14E-04 |
43 | GO:0034475: U4 snRNA 3'-end processing | 6.14E-04 |
44 | GO:0006753: nucleoside phosphate metabolic process | 9.96E-04 |
45 | GO:0080055: low-affinity nitrate transport | 9.96E-04 |
46 | GO:0001578: microtubule bundle formation | 9.96E-04 |
47 | GO:0045493: xylan catabolic process | 9.96E-04 |
48 | GO:0030261: chromosome condensation | 9.96E-04 |
49 | GO:0045165: cell fate commitment | 9.96E-04 |
50 | GO:0000913: preprophase band assembly | 9.96E-04 |
51 | GO:0016075: rRNA catabolic process | 9.96E-04 |
52 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 9.96E-04 |
53 | GO:0031022: nuclear migration along microfilament | 9.96E-04 |
54 | GO:0051127: positive regulation of actin nucleation | 9.96E-04 |
55 | GO:0019419: sulfate reduction | 9.96E-04 |
56 | GO:0080147: root hair cell development | 1.29E-03 |
57 | GO:0048645: animal organ formation | 1.42E-03 |
58 | GO:0008615: pyridoxine biosynthetic process | 1.42E-03 |
59 | GO:0006164: purine nucleotide biosynthetic process | 1.42E-03 |
60 | GO:0006168: adenine salvage | 1.42E-03 |
61 | GO:2001141: regulation of RNA biosynthetic process | 1.42E-03 |
62 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.42E-03 |
63 | GO:0006166: purine ribonucleoside salvage | 1.42E-03 |
64 | GO:0010239: chloroplast mRNA processing | 1.42E-03 |
65 | GO:0007020: microtubule nucleation | 1.91E-03 |
66 | GO:0006021: inositol biosynthetic process | 1.91E-03 |
67 | GO:0006734: NADH metabolic process | 1.91E-03 |
68 | GO:0009902: chloroplast relocation | 1.91E-03 |
69 | GO:0009165: nucleotide biosynthetic process | 1.91E-03 |
70 | GO:0046355: mannan catabolic process | 1.91E-03 |
71 | GO:0010107: potassium ion import | 1.91E-03 |
72 | GO:0015846: polyamine transport | 1.91E-03 |
73 | GO:0046785: microtubule polymerization | 2.43E-03 |
74 | GO:0098719: sodium ion import across plasma membrane | 2.43E-03 |
75 | GO:0009904: chloroplast accumulation movement | 2.43E-03 |
76 | GO:1902183: regulation of shoot apical meristem development | 2.43E-03 |
77 | GO:0044209: AMP salvage | 2.43E-03 |
78 | GO:0010158: abaxial cell fate specification | 2.43E-03 |
79 | GO:0007018: microtubule-based movement | 2.73E-03 |
80 | GO:0009791: post-embryonic development | 2.93E-03 |
81 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.00E-03 |
82 | GO:0018258: protein O-linked glycosylation via hydroxyproline | 3.00E-03 |
83 | GO:0009635: response to herbicide | 3.00E-03 |
84 | GO:0010405: arabinogalactan protein metabolic process | 3.00E-03 |
85 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.00E-03 |
86 | GO:0006139: nucleobase-containing compound metabolic process | 3.00E-03 |
87 | GO:0016554: cytidine to uridine editing | 3.00E-03 |
88 | GO:0016032: viral process | 3.35E-03 |
89 | GO:0010583: response to cyclopentenone | 3.35E-03 |
90 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 3.54E-03 |
91 | GO:0030163: protein catabolic process | 3.57E-03 |
92 | GO:0009942: longitudinal axis specification | 3.62E-03 |
93 | GO:0048280: vesicle fusion with Golgi apparatus | 3.62E-03 |
94 | GO:0009903: chloroplast avoidance movement | 3.62E-03 |
95 | GO:0030488: tRNA methylation | 3.62E-03 |
96 | GO:0042372: phylloquinone biosynthetic process | 3.62E-03 |
97 | GO:0015937: coenzyme A biosynthetic process | 4.26E-03 |
98 | GO:0048528: post-embryonic root development | 4.26E-03 |
99 | GO:0010078: maintenance of root meristem identity | 4.95E-03 |
100 | GO:0009704: de-etiolation | 4.95E-03 |
101 | GO:0055075: potassium ion homeostasis | 4.95E-03 |
102 | GO:0043562: cellular response to nitrogen levels | 5.67E-03 |
103 | GO:0009808: lignin metabolic process | 5.67E-03 |
104 | GO:0010093: specification of floral organ identity | 5.67E-03 |
105 | GO:0006002: fructose 6-phosphate metabolic process | 5.67E-03 |
106 | GO:0071482: cellular response to light stimulus | 5.67E-03 |
107 | GO:2000024: regulation of leaf development | 6.43E-03 |
108 | GO:0090333: regulation of stomatal closure | 6.43E-03 |
109 | GO:0048507: meristem development | 6.43E-03 |
110 | GO:0000373: Group II intron splicing | 6.43E-03 |
111 | GO:0006189: 'de novo' IMP biosynthetic process | 6.43E-03 |
112 | GO:0006811: ion transport | 6.51E-03 |
113 | GO:0010018: far-red light signaling pathway | 7.22E-03 |
114 | GO:0048354: mucilage biosynthetic process involved in seed coat development | 7.22E-03 |
115 | GO:0051453: regulation of intracellular pH | 7.22E-03 |
116 | GO:0009638: phototropism | 7.22E-03 |
117 | GO:0043067: regulation of programmed cell death | 7.22E-03 |
118 | GO:0042761: very long-chain fatty acid biosynthetic process | 7.22E-03 |
119 | GO:0009098: leucine biosynthetic process | 7.22E-03 |
120 | GO:0006896: Golgi to vacuole transport | 8.04E-03 |
121 | GO:0000103: sulfate assimilation | 8.04E-03 |
122 | GO:0045036: protein targeting to chloroplast | 8.04E-03 |
123 | GO:0010192: mucilage biosynthetic process | 8.04E-03 |
124 | GO:0009299: mRNA transcription | 8.04E-03 |
125 | GO:0006468: protein phosphorylation | 8.87E-03 |
126 | GO:1903507: negative regulation of nucleic acid-templated transcription | 8.90E-03 |
127 | GO:0006352: DNA-templated transcription, initiation | 8.90E-03 |
128 | GO:0009684: indoleacetic acid biosynthetic process | 8.90E-03 |
129 | GO:0010152: pollen maturation | 9.79E-03 |
130 | GO:0045037: protein import into chloroplast stroma | 9.79E-03 |
131 | GO:0030036: actin cytoskeleton organization | 1.07E-02 |
132 | GO:0050826: response to freezing | 1.07E-02 |
133 | GO:0009725: response to hormone | 1.07E-02 |
134 | GO:0009767: photosynthetic electron transport chain | 1.07E-02 |
135 | GO:0010588: cotyledon vascular tissue pattern formation | 1.07E-02 |
136 | GO:0010020: chloroplast fission | 1.17E-02 |
137 | GO:0009933: meristem structural organization | 1.17E-02 |
138 | GO:0048467: gynoecium development | 1.17E-02 |
139 | GO:0009825: multidimensional cell growth | 1.26E-02 |
140 | GO:0090351: seedling development | 1.26E-02 |
141 | GO:0010030: positive regulation of seed germination | 1.26E-02 |
142 | GO:0009585: red, far-red light phototransduction | 1.31E-02 |
143 | GO:0010025: wax biosynthetic process | 1.37E-02 |
144 | GO:0042753: positive regulation of circadian rhythm | 1.37E-02 |
145 | GO:0007010: cytoskeleton organization | 1.47E-02 |
146 | GO:0005992: trehalose biosynthetic process | 1.47E-02 |
147 | GO:0019344: cysteine biosynthetic process | 1.47E-02 |
148 | GO:0009944: polarity specification of adaxial/abaxial axis | 1.47E-02 |
149 | GO:0043622: cortical microtubule organization | 1.58E-02 |
150 | GO:0007017: microtubule-based process | 1.58E-02 |
151 | GO:0010073: meristem maintenance | 1.58E-02 |
152 | GO:0048367: shoot system development | 1.60E-02 |
153 | GO:0046777: protein autophosphorylation | 1.62E-02 |
154 | GO:0051260: protein homooligomerization | 1.68E-02 |
155 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 1.80E-02 |
156 | GO:0035428: hexose transmembrane transport | 1.80E-02 |
157 | GO:0045454: cell redox homeostasis | 1.87E-02 |
158 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 2.15E-02 |
159 | GO:0042147: retrograde transport, endosome to Golgi | 2.15E-02 |
160 | GO:0042335: cuticle development | 2.27E-02 |
161 | GO:0080022: primary root development | 2.27E-02 |
162 | GO:0010087: phloem or xylem histogenesis | 2.27E-02 |
163 | GO:0048653: anther development | 2.27E-02 |
164 | GO:0042631: cellular response to water deprivation | 2.27E-02 |
165 | GO:0045489: pectin biosynthetic process | 2.39E-02 |
166 | GO:0010154: fruit development | 2.39E-02 |
167 | GO:0010197: polar nucleus fusion | 2.39E-02 |
168 | GO:0010182: sugar mediated signaling pathway | 2.39E-02 |
169 | GO:0046323: glucose import | 2.39E-02 |
170 | GO:0009958: positive gravitropism | 2.39E-02 |
171 | GO:0006885: regulation of pH | 2.39E-02 |
172 | GO:0006814: sodium ion transport | 2.52E-02 |
173 | GO:0055114: oxidation-reduction process | 2.56E-02 |
174 | GO:0048825: cotyledon development | 2.65E-02 |
175 | GO:0008654: phospholipid biosynthetic process | 2.65E-02 |
176 | GO:0009851: auxin biosynthetic process | 2.65E-02 |
177 | GO:0006623: protein targeting to vacuole | 2.65E-02 |
178 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 2.78E-02 |
179 | GO:0006891: intra-Golgi vesicle-mediated transport | 2.78E-02 |
180 | GO:0006413: translational initiation | 3.01E-02 |
181 | GO:1901657: glycosyl compound metabolic process | 3.05E-02 |
182 | GO:0009639: response to red or far red light | 3.19E-02 |
183 | GO:0006464: cellular protein modification process | 3.19E-02 |
184 | GO:0045490: pectin catabolic process | 3.22E-02 |
185 | GO:0006508: proteolysis | 3.62E-02 |
186 | GO:0007166: cell surface receptor signaling pathway | 3.68E-02 |
187 | GO:0009627: systemic acquired resistance | 3.91E-02 |
188 | GO:0010411: xyloglucan metabolic process | 4.06E-02 |
189 | GO:0006888: ER to Golgi vesicle-mediated transport | 4.06E-02 |
190 | GO:0071555: cell wall organization | 4.10E-02 |
191 | GO:0009651: response to salt stress | 4.25E-02 |
192 | GO:0030244: cellulose biosynthetic process | 4.37E-02 |
193 | GO:0009735: response to cytokinin | 4.43E-02 |
194 | GO:0006499: N-terminal protein myristoylation | 4.68E-02 |
195 | GO:0009826: unidimensional cell growth | 4.78E-02 |
196 | GO:0048527: lateral root development | 4.84E-02 |
197 | GO:0009416: response to light stimulus | 4.94E-02 |
198 | GO:0006865: amino acid transport | 5.00E-02 |
Rank | GO Term | Adjusted P value |
---|---|---|
1 | GO:0019808: polyamine binding | 0.00E+00 |
2 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
3 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
4 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
5 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
6 | GO:0008176: tRNA (guanine-N7-)-methyltransferase activity | 0.00E+00 |
7 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
8 | GO:0019136: deoxynucleoside kinase activity | 0.00E+00 |
9 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
10 | GO:0008017: microtubule binding | 3.01E-05 |
11 | GO:0000293: ferric-chelate reductase activity | 1.20E-04 |
12 | GO:0003984: acetolactate synthase activity | 2.80E-04 |
13 | GO:0052856: NADHX epimerase activity | 2.80E-04 |
14 | GO:0052857: NADPHX epimerase activity | 2.80E-04 |
15 | GO:0050139: nicotinate-N-glucosyltransferase activity | 2.80E-04 |
16 | GO:0004733: pyridoxamine-phosphate oxidase activity | 2.80E-04 |
17 | GO:0010945: CoA pyrophosphatase activity | 2.80E-04 |
18 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 6.14E-04 |
19 | GO:0001077: transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding | 6.14E-04 |
20 | GO:0004512: inositol-3-phosphate synthase activity | 6.14E-04 |
21 | GO:0048531: beta-1,3-galactosyltransferase activity | 6.14E-04 |
22 | GO:0017118: lipoyltransferase activity | 6.14E-04 |
23 | GO:0043425: bHLH transcription factor binding | 6.14E-04 |
24 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 6.14E-04 |
25 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 6.14E-04 |
26 | GO:0003938: IMP dehydrogenase activity | 6.14E-04 |
27 | GO:0004817: cysteine-tRNA ligase activity | 6.14E-04 |
28 | GO:0009973: adenylyl-sulfate reductase activity | 6.14E-04 |
29 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 6.14E-04 |
30 | GO:0004148: dihydrolipoyl dehydrogenase activity | 9.96E-04 |
31 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 9.96E-04 |
32 | GO:0003999: adenine phosphoribosyltransferase activity | 1.42E-03 |
33 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.42E-03 |
34 | GO:0052656: L-isoleucine transaminase activity | 1.42E-03 |
35 | GO:0052654: L-leucine transaminase activity | 1.42E-03 |
36 | GO:0052655: L-valine transaminase activity | 1.42E-03 |
37 | GO:0048027: mRNA 5'-UTR binding | 1.42E-03 |
38 | GO:0030570: pectate lyase activity | 1.86E-03 |
39 | GO:0009044: xylan 1,4-beta-xylosidase activity | 1.91E-03 |
40 | GO:0004084: branched-chain-amino-acid transaminase activity | 1.91E-03 |
41 | GO:0046556: alpha-L-arabinofuranosidase activity | 1.91E-03 |
42 | GO:0001053: plastid sigma factor activity | 1.91E-03 |
43 | GO:0004737: pyruvate decarboxylase activity | 1.91E-03 |
44 | GO:0008409: 5'-3' exonuclease activity | 1.91E-03 |
45 | GO:0016985: mannan endo-1,4-beta-mannosidase activity | 1.91E-03 |
46 | GO:0016987: sigma factor activity | 1.91E-03 |
47 | GO:0003777: microtubule motor activity | 2.35E-03 |
48 | GO:0016773: phosphotransferase activity, alcohol group as acceptor | 2.43E-03 |
49 | GO:0016846: carbon-sulfur lyase activity | 2.43E-03 |
50 | GO:0005524: ATP binding | 2.69E-03 |
51 | GO:0010181: FMN binding | 2.73E-03 |
52 | GO:0000210: NAD+ diphosphatase activity | 3.00E-03 |
53 | GO:0016208: AMP binding | 3.00E-03 |
54 | GO:0042578: phosphoric ester hydrolase activity | 3.00E-03 |
55 | GO:0015081: sodium ion transmembrane transporter activity | 3.00E-03 |
56 | GO:0030976: thiamine pyrophosphate binding | 3.00E-03 |
57 | GO:1990714: hydroxyproline O-galactosyltransferase activity | 3.00E-03 |
58 | GO:0004709: MAP kinase kinase kinase activity | 3.00E-03 |
59 | GO:0016832: aldehyde-lyase activity | 3.62E-03 |
60 | GO:0009927: histidine phosphotransfer kinase activity | 3.62E-03 |
61 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 3.62E-03 |
62 | GO:0003872: 6-phosphofructokinase activity | 4.26E-03 |
63 | GO:0004252: serine-type endopeptidase activity | 4.92E-03 |
64 | GO:0043022: ribosome binding | 4.95E-03 |
65 | GO:0030247: polysaccharide binding | 5.33E-03 |
66 | GO:0008236: serine-type peptidase activity | 5.62E-03 |
67 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 5.94E-03 |
68 | GO:0004805: trehalose-phosphatase activity | 8.04E-03 |
69 | GO:0015386: potassium:proton antiporter activity | 8.90E-03 |
70 | GO:0008794: arsenate reductase (glutaredoxin) activity | 8.90E-03 |
71 | GO:0008559: xenobiotic-transporting ATPase activity | 8.90E-03 |
72 | GO:0000175: 3'-5'-exoribonuclease activity | 1.07E-02 |
73 | GO:0008131: primary amine oxidase activity | 1.17E-02 |
74 | GO:0042973: glucan endo-1,3-beta-D-glucosidase activity | 1.17E-02 |
75 | GO:0050660: flavin adenine dinucleotide binding | 1.36E-02 |
76 | GO:0003887: DNA-directed DNA polymerase activity | 1.37E-02 |
77 | GO:0003714: transcription corepressor activity | 1.47E-02 |
78 | GO:0005528: FK506 binding | 1.47E-02 |
79 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 1.68E-02 |
80 | GO:0008408: 3'-5' exonuclease activity | 1.68E-02 |
81 | GO:0004871: signal transducer activity | 1.99E-02 |
82 | GO:0004553: hydrolase activity, hydrolyzing O-glycosyl compounds | 2.19E-02 |
83 | GO:0046872: metal ion binding | 2.42E-02 |
84 | GO:0003924: GTPase activity | 2.44E-02 |
85 | GO:0005355: glucose transmembrane transporter activity | 2.52E-02 |
86 | GO:0016829: lyase activity | 2.53E-02 |
87 | GO:0008565: protein transporter activity | 2.80E-02 |
88 | GO:0005525: GTP binding | 3.03E-02 |
89 | GO:0015385: sodium:proton antiporter activity | 3.05E-02 |
90 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.05E-02 |
91 | GO:0016301: kinase activity | 3.24E-02 |
92 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 3.33E-02 |
93 | GO:0005200: structural constituent of cytoskeleton | 3.33E-02 |
94 | GO:0003743: translation initiation factor activity | 3.76E-02 |
95 | GO:0004674: protein serine/threonine kinase activity | 3.78E-02 |
96 | GO:0004721: phosphoprotein phosphatase activity | 4.06E-02 |
97 | GO:0102483: scopolin beta-glucosidase activity | 4.06E-02 |
98 | GO:0005096: GTPase activator activity | 4.52E-02 |
99 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 4.84E-02 |
100 | GO:0016787: hydrolase activity | 4.84E-02 |
101 | GO:0050897: cobalt ion binding | 4.84E-02 |