GO Enrichment Analysis of Co-expressed Genes with
AT4G21760
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0042817: pyridoxal metabolic process | 0.00E+00 |
| 2 | GO:0097275: cellular ammonia homeostasis | 0.00E+00 |
| 3 | GO:0051924: regulation of calcium ion transport | 0.00E+00 |
| 4 | GO:0042407: cristae formation | 0.00E+00 |
| 5 | GO:0046460: neutral lipid biosynthetic process | 0.00E+00 |
| 6 | GO:0019379: sulfate assimilation, phosphoadenylyl sulfate reduction by phosphoadenylyl-sulfate reductase (thioredoxin) | 0.00E+00 |
| 7 | GO:0031054: pre-miRNA processing | 0.00E+00 |
| 8 | GO:2001294: malonyl-CoA catabolic process | 0.00E+00 |
| 9 | GO:0031116: positive regulation of microtubule polymerization | 0.00E+00 |
| 10 | GO:0009733: response to auxin | 2.11E-05 |
| 11 | GO:0009734: auxin-activated signaling pathway | 7.44E-05 |
| 12 | GO:0006021: inositol biosynthetic process | 7.90E-05 |
| 13 | GO:0030488: tRNA methylation | 2.41E-04 |
| 14 | GO:0071028: nuclear mRNA surveillance | 3.57E-04 |
| 15 | GO:0043266: regulation of potassium ion transport | 3.57E-04 |
| 16 | GO:0006659: phosphatidylserine biosynthetic process | 3.57E-04 |
| 17 | GO:0043087: regulation of GTPase activity | 3.57E-04 |
| 18 | GO:2000021: regulation of ion homeostasis | 3.57E-04 |
| 19 | GO:1902458: positive regulation of stomatal opening | 3.57E-04 |
| 20 | GO:0051171: regulation of nitrogen compound metabolic process | 3.57E-04 |
| 21 | GO:0031426: polycistronic mRNA processing | 3.57E-04 |
| 22 | GO:0040008: regulation of growth | 4.01E-04 |
| 23 | GO:0080064: 4,4-dimethyl-9beta,19-cyclopropylsterol oxidation | 7.77E-04 |
| 24 | GO:1900033: negative regulation of trichome patterning | 7.77E-04 |
| 25 | GO:0031125: rRNA 3'-end processing | 7.77E-04 |
| 26 | GO:1903426: regulation of reactive oxygen species biosynthetic process | 7.77E-04 |
| 27 | GO:0006568: tryptophan metabolic process | 7.77E-04 |
| 28 | GO:0015804: neutral amino acid transport | 7.77E-04 |
| 29 | GO:0071051: polyadenylation-dependent snoRNA 3'-end processing | 7.77E-04 |
| 30 | GO:0006739: NADP metabolic process | 7.77E-04 |
| 31 | GO:0034475: U4 snRNA 3'-end processing | 7.77E-04 |
| 32 | GO:0006423: cysteinyl-tRNA aminoacylation | 7.77E-04 |
| 33 | GO:2000012: regulation of auxin polar transport | 1.18E-03 |
| 34 | GO:0080055: low-affinity nitrate transport | 1.26E-03 |
| 35 | GO:0051604: protein maturation | 1.26E-03 |
| 36 | GO:0001578: microtubule bundle formation | 1.26E-03 |
| 37 | GO:0045493: xylan catabolic process | 1.26E-03 |
| 38 | GO:0016075: rRNA catabolic process | 1.26E-03 |
| 39 | GO:0033591: response to L-ascorbic acid | 1.26E-03 |
| 40 | GO:0034427: nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' | 1.26E-03 |
| 41 | GO:1902448: positive regulation of shade avoidance | 1.26E-03 |
| 42 | GO:0019419: sulfate reduction | 1.26E-03 |
| 43 | GO:0006753: nucleoside phosphate metabolic process | 1.26E-03 |
| 44 | GO:0010589: leaf proximal/distal pattern formation | 1.26E-03 |
| 45 | GO:0010255: glucose mediated signaling pathway | 1.81E-03 |
| 46 | GO:0006168: adenine salvage | 1.81E-03 |
| 47 | GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly | 1.81E-03 |
| 48 | GO:0006166: purine ribonucleoside salvage | 1.81E-03 |
| 49 | GO:2001289: lipid X metabolic process | 1.81E-03 |
| 50 | GO:0010239: chloroplast mRNA processing | 1.81E-03 |
| 51 | GO:0009647: skotomorphogenesis | 1.81E-03 |
| 52 | GO:0006164: purine nucleotide biosynthetic process | 1.81E-03 |
| 53 | GO:0009226: nucleotide-sugar biosynthetic process | 1.81E-03 |
| 54 | GO:0008615: pyridoxine biosynthetic process | 1.81E-03 |
| 55 | GO:0006734: NADH metabolic process | 2.44E-03 |
| 56 | GO:0048629: trichome patterning | 2.44E-03 |
| 57 | GO:0051322: anaphase | 2.44E-03 |
| 58 | GO:0035279: mRNA cleavage involved in gene silencing by miRNA | 2.44E-03 |
| 59 | GO:0007020: microtubule nucleation | 2.44E-03 |
| 60 | GO:0045038: protein import into chloroplast thylakoid membrane | 3.11E-03 |
| 61 | GO:0044209: AMP salvage | 3.11E-03 |
| 62 | GO:0046785: microtubule polymerization | 3.11E-03 |
| 63 | GO:0009789: positive regulation of abscisic acid-activated signaling pathway | 3.13E-03 |
| 64 | GO:0010197: polar nucleus fusion | 3.64E-03 |
| 65 | GO:0010264: myo-inositol hexakisphosphate biosynthetic process | 3.85E-03 |
| 66 | GO:0016554: cytidine to uridine editing | 3.85E-03 |
| 67 | GO:0009920: cell plate formation involved in plant-type cell wall biogenesis | 3.85E-03 |
| 68 | GO:0032973: amino acid export | 3.85E-03 |
| 69 | GO:0000741: karyogamy | 3.85E-03 |
| 70 | GO:0010190: cytochrome b6f complex assembly | 3.85E-03 |
| 71 | GO:0046855: inositol phosphate dephosphorylation | 3.85E-03 |
| 72 | GO:0009791: post-embryonic development | 4.20E-03 |
| 73 | GO:0048280: vesicle fusion with Golgi apparatus | 4.64E-03 |
| 74 | GO:0080086: stamen filament development | 4.64E-03 |
| 75 | GO:0009648: photoperiodism | 4.64E-03 |
| 76 | GO:0034389: lipid particle organization | 4.64E-03 |
| 77 | GO:0042372: phylloquinone biosynthetic process | 4.64E-03 |
| 78 | GO:0030307: positive regulation of cell growth | 5.48E-03 |
| 79 | GO:0035196: production of miRNAs involved in gene silencing by miRNA | 5.48E-03 |
| 80 | GO:0048528: post-embryonic root development | 5.48E-03 |
| 81 | GO:0043090: amino acid import | 5.48E-03 |
| 82 | GO:0010196: nonphotochemical quenching | 5.48E-03 |
| 83 | GO:0015937: coenzyme A biosynthetic process | 5.48E-03 |
| 84 | GO:0010078: maintenance of root meristem identity | 6.37E-03 |
| 85 | GO:0009704: de-etiolation | 6.37E-03 |
| 86 | GO:2000070: regulation of response to water deprivation | 6.37E-03 |
| 87 | GO:0046620: regulation of organ growth | 6.37E-03 |
| 88 | GO:0010027: thylakoid membrane organization | 6.51E-03 |
| 89 | GO:0032544: plastid translation | 7.30E-03 |
| 90 | GO:0043562: cellular response to nitrogen levels | 7.30E-03 |
| 91 | GO:0006189: 'de novo' IMP biosynthetic process | 8.29E-03 |
| 92 | GO:0015780: nucleotide-sugar transport | 8.29E-03 |
| 93 | GO:0009245: lipid A biosynthetic process | 8.29E-03 |
| 94 | GO:0019432: triglyceride biosynthetic process | 8.29E-03 |
| 95 | GO:0048507: meristem development | 8.29E-03 |
| 96 | GO:0010206: photosystem II repair | 8.29E-03 |
| 97 | GO:0080144: amino acid homeostasis | 8.29E-03 |
| 98 | GO:0043067: regulation of programmed cell death | 9.31E-03 |
| 99 | GO:1900865: chloroplast RNA modification | 9.31E-03 |
| 100 | GO:0010267: production of ta-siRNAs involved in RNA interference | 9.31E-03 |
| 101 | GO:0042761: very long-chain fatty acid biosynthetic process | 9.31E-03 |
| 102 | GO:0010380: regulation of chlorophyll biosynthetic process | 9.31E-03 |
| 103 | GO:0000103: sulfate assimilation | 1.04E-02 |
| 104 | GO:0045036: protein targeting to chloroplast | 1.04E-02 |
| 105 | GO:0006896: Golgi to vacuole transport | 1.04E-02 |
| 106 | GO:1903507: negative regulation of nucleic acid-templated transcription | 1.15E-02 |
| 107 | GO:0009684: indoleacetic acid biosynthetic process | 1.15E-02 |
| 108 | GO:0009773: photosynthetic electron transport in photosystem I | 1.15E-02 |
| 109 | GO:0006415: translational termination | 1.15E-02 |
| 110 | GO:0007275: multicellular organism development | 1.22E-02 |
| 111 | GO:0006790: sulfur compound metabolic process | 1.27E-02 |
| 112 | GO:0010588: cotyledon vascular tissue pattern formation | 1.39E-02 |
| 113 | GO:0009266: response to temperature stimulus | 1.51E-02 |
| 114 | GO:0048467: gynoecium development | 1.51E-02 |
| 115 | GO:0090351: seedling development | 1.64E-02 |
| 116 | GO:0010030: positive regulation of seed germination | 1.64E-02 |
| 117 | GO:0046854: phosphatidylinositol phosphorylation | 1.64E-02 |
| 118 | GO:0019853: L-ascorbic acid biosynthetic process | 1.64E-02 |
| 119 | GO:0009833: plant-type primary cell wall biogenesis | 1.77E-02 |
| 120 | GO:0006071: glycerol metabolic process | 1.77E-02 |
| 121 | GO:0010025: wax biosynthetic process | 1.77E-02 |
| 122 | GO:0009658: chloroplast organization | 1.80E-02 |
| 123 | GO:0019344: cysteine biosynthetic process | 1.90E-02 |
| 124 | GO:0030150: protein import into mitochondrial matrix | 1.90E-02 |
| 125 | GO:0007010: cytoskeleton organization | 1.90E-02 |
| 126 | GO:0080147: root hair cell development | 1.90E-02 |
| 127 | GO:0010187: negative regulation of seed germination | 1.90E-02 |
| 128 | GO:0043622: cortical microtubule organization | 2.04E-02 |
| 129 | GO:0003333: amino acid transmembrane transport | 2.18E-02 |
| 130 | GO:0031348: negative regulation of defense response | 2.33E-02 |
| 131 | GO:0010017: red or far-red light signaling pathway | 2.33E-02 |
| 132 | GO:0035428: hexose transmembrane transport | 2.33E-02 |
| 133 | GO:0006730: one-carbon metabolic process | 2.33E-02 |
| 134 | GO:2000022: regulation of jasmonic acid mediated signaling pathway | 2.33E-02 |
| 135 | GO:0009686: gibberellin biosynthetic process | 2.48E-02 |
| 136 | GO:0009306: protein secretion | 2.63E-02 |
| 137 | GO:0010214: seed coat development | 2.63E-02 |
| 138 | GO:0006396: RNA processing | 2.77E-02 |
| 139 | GO:0042147: retrograde transport, endosome to Golgi | 2.79E-02 |
| 140 | GO:0080022: primary root development | 2.95E-02 |
| 141 | GO:0010087: phloem or xylem histogenesis | 2.95E-02 |
| 142 | GO:0042631: cellular response to water deprivation | 2.95E-02 |
| 143 | GO:0045454: cell redox homeostasis | 2.96E-02 |
| 144 | GO:0046323: glucose import | 3.11E-02 |
| 145 | GO:0010268: brassinosteroid homeostasis | 3.11E-02 |
| 146 | GO:0009958: positive gravitropism | 3.11E-02 |
| 147 | GO:0010305: leaf vascular tissue pattern formation | 3.11E-02 |
| 148 | GO:0008654: phospholipid biosynthetic process | 3.44E-02 |
| 149 | GO:0009851: auxin biosynthetic process | 3.44E-02 |
| 150 | GO:0006623: protein targeting to vacuole | 3.44E-02 |
| 151 | GO:0048825: cotyledon development | 3.44E-02 |
| 152 | GO:0000302: response to reactive oxygen species | 3.61E-02 |
| 153 | GO:0006891: intra-Golgi vesicle-mediated transport | 3.61E-02 |
| 154 | GO:0016132: brassinosteroid biosynthetic process | 3.61E-02 |
| 155 | GO:0048510: regulation of timing of transition from vegetative to reproductive phase | 3.61E-02 |
| 156 | GO:0010583: response to cyclopentenone | 3.78E-02 |
| 157 | GO:0016032: viral process | 3.78E-02 |
| 158 | GO:1901657: glycosyl compound metabolic process | 3.96E-02 |
| 159 | GO:0030163: protein catabolic process | 3.96E-02 |
| 160 | GO:0016125: sterol metabolic process | 4.14E-02 |
| 161 | GO:0000910: cytokinesis | 4.50E-02 |
| 162 | GO:0045490: pectin catabolic process | 4.63E-02 |
| 163 | GO:0007623: circadian rhythm | 4.63E-02 |
| 164 | GO:0016126: sterol biosynthetic process | 4.69E-02 |
| 165 | GO:0009911: positive regulation of flower development | 4.69E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0080176: xyloglucan 1,6-alpha-xylosidase activity | 0.00E+00 |
| 2 | GO:0008756: o-succinylbenzoate-CoA ligase activity | 0.00E+00 |
| 3 | GO:1990534: thermospermine oxidase activity | 0.00E+00 |
| 4 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 5 | GO:0009029: tetraacyldisaccharide 4'-kinase activity | 0.00E+00 |
| 6 | GO:0061634: alpha-D-xyloside xylohydrolase | 0.00E+00 |
| 7 | GO:0004639: phosphoribosylaminoimidazolesuccinocarboxamide synthase activity | 0.00E+00 |
| 8 | GO:0052906: tRNA (guanine(37)-N(1))-methyltransferase activity | 3.57E-04 |
| 9 | GO:0052857: NADPHX epimerase activity | 3.57E-04 |
| 10 | GO:0010347: L-galactose-1-phosphate phosphatase activity | 3.57E-04 |
| 11 | GO:0050139: nicotinate-N-glucosyltransferase activity | 3.57E-04 |
| 12 | GO:0004425: indole-3-glycerol-phosphate synthase activity | 3.57E-04 |
| 13 | GO:0004733: pyridoxamine-phosphate oxidase activity | 3.57E-04 |
| 14 | GO:0010945: CoA pyrophosphatase activity | 3.57E-04 |
| 15 | GO:0051777: ent-kaurenoate oxidase activity | 3.57E-04 |
| 16 | GO:0052856: NADHX epimerase activity | 3.57E-04 |
| 17 | GO:0015172: acidic amino acid transmembrane transporter activity | 7.77E-04 |
| 18 | GO:0050362: L-tryptophan:2-oxoglutarate aminotransferase activity | 7.77E-04 |
| 19 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 7.77E-04 |
| 20 | GO:0033741: adenylyl-sulfate reductase (glutathione) activity | 7.77E-04 |
| 21 | GO:0052832: inositol monophosphate 3-phosphatase activity | 7.77E-04 |
| 22 | GO:0004817: cysteine-tRNA ligase activity | 7.77E-04 |
| 23 | GO:0008934: inositol monophosphate 1-phosphatase activity | 7.77E-04 |
| 24 | GO:0009973: adenylyl-sulfate reductase activity | 7.77E-04 |
| 25 | GO:0052833: inositol monophosphate 4-phosphatase activity | 7.77E-04 |
| 26 | GO:0080097: L-tryptophan:pyruvate aminotransferase activity | 7.77E-04 |
| 27 | GO:0016630: protochlorophyllide reductase activity | 7.77E-04 |
| 28 | GO:0004604: phosphoadenylyl-sulfate reductase (thioredoxin) activity | 7.77E-04 |
| 29 | GO:0004512: inositol-3-phosphate synthase activity | 7.77E-04 |
| 30 | GO:0052692: raffinose alpha-galactosidase activity | 1.26E-03 |
| 31 | GO:0080054: low-affinity nitrate transmembrane transporter activity | 1.26E-03 |
| 32 | GO:0004557: alpha-galactosidase activity | 1.26E-03 |
| 33 | GO:0016149: translation release factor activity, codon specific | 1.81E-03 |
| 34 | GO:0035198: miRNA binding | 1.81E-03 |
| 35 | GO:0000254: C-4 methylsterol oxidase activity | 1.81E-03 |
| 36 | GO:0015175: neutral amino acid transmembrane transporter activity | 1.81E-03 |
| 37 | GO:0048027: mRNA 5'-UTR binding | 1.81E-03 |
| 38 | GO:0003999: adenine phosphoribosyltransferase activity | 1.81E-03 |
| 39 | GO:0008893: guanosine-3',5'-bis(diphosphate) 3'-diphosphatase activity | 1.81E-03 |
| 40 | GO:0046556: alpha-L-arabinofuranosidase activity | 2.44E-03 |
| 41 | GO:0009044: xylan 1,4-beta-xylosidase activity | 2.44E-03 |
| 42 | GO:0030570: pectate lyase activity | 2.66E-03 |
| 43 | GO:0016846: carbon-sulfur lyase activity | 3.11E-03 |
| 44 | GO:0016208: AMP binding | 3.85E-03 |
| 45 | GO:0000210: NAD+ diphosphatase activity | 3.85E-03 |
| 46 | GO:0042578: phosphoric ester hydrolase activity | 3.85E-03 |
| 47 | GO:0004144: diacylglycerol O-acyltransferase activity | 4.64E-03 |
| 48 | GO:0004723: calcium-dependent protein serine/threonine phosphatase activity | 4.64E-03 |
| 49 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 4.64E-03 |
| 50 | GO:0016832: aldehyde-lyase activity | 4.64E-03 |
| 51 | GO:0009927: histidine phosphotransfer kinase activity | 4.64E-03 |
| 52 | GO:0005338: nucleotide-sugar transmembrane transporter activity | 5.48E-03 |
| 53 | GO:0043022: ribosome binding | 6.37E-03 |
| 54 | GO:0008173: RNA methyltransferase activity | 7.30E-03 |
| 55 | GO:0016829: lyase activity | 7.57E-03 |
| 56 | GO:0008236: serine-type peptidase activity | 8.09E-03 |
| 57 | GO:0003747: translation release factor activity | 8.29E-03 |
| 58 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 9.85E-03 |
| 59 | GO:0008017: microtubule binding | 1.10E-02 |
| 60 | GO:0047372: acylglycerol lipase activity | 1.15E-02 |
| 61 | GO:0008794: arsenate reductase (glutaredoxin) activity | 1.15E-02 |
| 62 | GO:0004022: alcohol dehydrogenase (NAD) activity | 1.39E-02 |
| 63 | GO:0004089: carbonate dehydratase activity | 1.39E-02 |
| 64 | GO:0031072: heat shock protein binding | 1.39E-02 |
| 65 | GO:0000175: 3'-5'-exoribonuclease activity | 1.39E-02 |
| 66 | GO:0003725: double-stranded RNA binding | 1.39E-02 |
| 67 | GO:0015266: protein channel activity | 1.39E-02 |
| 68 | GO:0008131: primary amine oxidase activity | 1.51E-02 |
| 69 | GO:0005528: FK506 binding | 1.90E-02 |
| 70 | GO:0003714: transcription corepressor activity | 1.90E-02 |
| 71 | GO:0051087: chaperone binding | 2.04E-02 |
| 72 | GO:0015171: amino acid transmembrane transporter activity | 2.09E-02 |
| 73 | GO:0019706: protein-cysteine S-palmitoyltransferase activity | 2.18E-02 |
| 74 | GO:0008408: 3'-5' exonuclease activity | 2.18E-02 |
| 75 | GO:0005506: iron ion binding | 2.46E-02 |
| 76 | GO:0008270: zinc ion binding | 2.47E-02 |
| 77 | GO:0016760: cellulose synthase (UDP-forming) activity | 2.48E-02 |
| 78 | GO:0052689: carboxylic ester hydrolase activity | 2.68E-02 |
| 79 | GO:0008536: Ran GTPase binding | 3.11E-02 |
| 80 | GO:0001085: RNA polymerase II transcription factor binding | 3.11E-02 |
| 81 | GO:0005355: glucose transmembrane transporter activity | 3.27E-02 |
| 82 | GO:0010181: FMN binding | 3.27E-02 |
| 83 | GO:0004252: serine-type endopeptidase activity | 3.73E-02 |
| 84 | GO:0000156: phosphorelay response regulator activity | 3.96E-02 |
| 85 | GO:0016671: oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor | 3.96E-02 |
| 86 | GO:0016759: cellulose synthase activity | 4.14E-02 |
| 87 | GO:0019825: oxygen binding | 4.18E-02 |
| 88 | GO:0004675: transmembrane receptor protein serine/threonine kinase activity | 4.32E-02 |
| 89 | GO:0016722: oxidoreductase activity, oxidizing metal ions | 4.32E-02 |
| 90 | GO:0015297: antiporter activity | 4.42E-02 |