Gene type: Transcription factor Metabolic gene Others DE type: Up Down Slightly_up Slightly_down Mixeded Others

GO Enrichment Analysis of Co-expressed Genes with

AT4G21610

GO-BP
GO-MF
GO-CC
RankGO TermAdjusted P value
1GO:0097250: mitochondrial respiratory chain supercomplex assembly0.00E+00
2GO:0046865: terpenoid transport0.00E+00
3GO:0002084: protein depalmitoylation0.00E+00
4GO:0034756: regulation of iron ion transport0.00E+00
5GO:0051707: response to other organism1.34E-04
6GO:0031123: RNA 3'-end processing2.43E-04
7GO:0009700: indole phytoalexin biosynthetic process2.43E-04
8GO:0010230: alternative respiration2.43E-04
9GO:0042868: antisense RNA metabolic process2.43E-04
10GO:0002143: tRNA wobble position uridine thiolation2.43E-04
11GO:0098789: pre-mRNA cleavage required for polyadenylation2.43E-04
12GO:0001558: regulation of cell growth2.74E-04
13GO:0010120: camalexin biosynthetic process2.74E-04
14GO:0009627: systemic acquired resistance4.91E-04
15GO:0009156: ribonucleoside monophosphate biosynthetic process5.39E-04
16GO:0035335: peptidyl-tyrosine dephosphorylation5.39E-04
17GO:0015709: thiosulfate transport5.39E-04
18GO:0071422: succinate transmembrane transport5.39E-04
19GO:0048569: post-embryonic animal organ development5.39E-04
20GO:0042853: L-alanine catabolic process5.39E-04
21GO:0043066: negative regulation of apoptotic process5.39E-04
22GO:0008535: respiratory chain complex IV assembly5.39E-04
23GO:0051252: regulation of RNA metabolic process5.39E-04
24GO:0010053: root epidermal cell differentiation8.68E-04
25GO:0045836: positive regulation of meiotic nuclear division8.75E-04
26GO:0006517: protein deglycosylation8.75E-04
27GO:0071494: cellular response to UV-C8.75E-04
28GO:0015692: lead ion transport8.75E-04
29GO:0060968: regulation of gene silencing8.75E-04
30GO:0080168: abscisic acid transport8.75E-04
31GO:0071367: cellular response to brassinosteroid stimulus8.75E-04
32GO:0061158: 3'-UTR-mediated mRNA destabilization8.75E-04
33GO:0017006: protein-tetrapyrrole linkage8.75E-04
34GO:0006515: misfolded or incompletely synthesized protein catabolic process1.25E-03
35GO:0055089: fatty acid homeostasis1.25E-03
36GO:0015729: oxaloacetate transport1.25E-03
37GO:0009584: detection of visible light1.25E-03
38GO:0010104: regulation of ethylene-activated signaling pathway1.25E-03
39GO:0006516: glycoprotein catabolic process1.25E-03
40GO:0002679: respiratory burst involved in defense response1.25E-03
41GO:0010731: protein glutathionylation1.25E-03
42GO:0009636: response to toxic substance1.28E-03
43GO:0071456: cellular response to hypoxia1.40E-03
44GO:0071369: cellular response to ethylene stimulus1.53E-03
45GO:0009165: nucleotide biosynthetic process1.67E-03
46GO:0033320: UDP-D-xylose biosynthetic process1.67E-03
47GO:0010363: regulation of plant-type hypersensitive response1.67E-03
48GO:0010188: response to microbial phytotoxin1.67E-03
49GO:0000380: alternative mRNA splicing, via spliceosome2.13E-03
50GO:0045927: positive regulation of growth2.13E-03
51GO:0071423: malate transmembrane transport2.13E-03
52GO:0006544: glycine metabolic process2.13E-03
53GO:0009626: plant-type hypersensitive response2.15E-03
54GO:0006623: protein targeting to vacuole2.40E-03
55GO:0010193: response to ozone2.57E-03
56GO:0006561: proline biosynthetic process2.62E-03
57GO:0006563: L-serine metabolic process2.62E-03
58GO:0006777: Mo-molybdopterin cofactor biosynthetic process2.62E-03
59GO:0042732: D-xylose metabolic process2.62E-03
60GO:0035435: phosphate ion transmembrane transport2.62E-03
61GO:0031047: gene silencing by RNA2.75E-03
62GO:0051607: defense response to virus3.50E-03
63GO:1900056: negative regulation of leaf senescence3.72E-03
64GO:2000014: regulation of endosperm development3.72E-03
65GO:0008272: sulfate transport3.72E-03
66GO:0050821: protein stabilization4.31E-03
67GO:0006102: isocitrate metabolic process4.31E-03
68GO:0018401: peptidyl-proline hydroxylation to 4-hydroxy-L-proline4.31E-03
69GO:0009819: drought recovery4.31E-03
70GO:1900150: regulation of defense response to fungus4.31E-03
71GO:2000070: regulation of response to water deprivation4.31E-03
72GO:0009817: defense response to fungus, incompatible interaction4.83E-03
73GO:0006002: fructose 6-phosphate metabolic process4.93E-03
74GO:0010204: defense response signaling pathway, resistance gene-independent4.93E-03
75GO:0010150: leaf senescence5.03E-03
76GO:0009407: toxin catabolic process5.33E-03
77GO:0006952: defense response5.34E-03
78GO:0010112: regulation of systemic acquired resistance5.59E-03
79GO:0048589: developmental growth5.59E-03
80GO:0090332: stomatal closure6.27E-03
81GO:0035999: tetrahydrofolate interconversion6.27E-03
82GO:0009862: systemic acquired resistance, salicylic acid mediated signaling pathway6.27E-03
83GO:0043069: negative regulation of programmed cell death6.99E-03
84GO:0009870: defense response signaling pathway, resistance gene-dependent6.99E-03
85GO:0006816: calcium ion transport7.73E-03
86GO:0009089: lysine biosynthetic process via diaminopimelate7.73E-03
87GO:0006890: retrograde vesicle-mediated transport, Golgi to ER8.49E-03
88GO:0008361: regulation of cell size8.49E-03
89GO:0006790: sulfur compound metabolic process8.49E-03
90GO:0016925: protein sumoylation8.49E-03
91GO:0009718: anthocyanin-containing compound biosynthetic process9.29E-03
92GO:0032436: positive regulation of proteasomal ubiquitin-dependent protein catabolic process9.29E-03
93GO:0006626: protein targeting to mitochondrion9.29E-03
94GO:0042742: defense response to bacterium9.55E-03
95GO:0006541: glutamine metabolic process1.01E-02
96GO:0007034: vacuolar transport1.01E-02
97GO:0009809: lignin biosynthetic process1.07E-02
98GO:0046854: phosphatidylinositol phosphorylation1.10E-02
99GO:0009225: nucleotide-sugar metabolic process1.10E-02
100GO:0042343: indole glucosinolate metabolic process1.10E-02
101GO:0007030: Golgi organization1.10E-02
102GO:0010039: response to iron ion1.10E-02
103GO:0071732: cellular response to nitric oxide1.10E-02
104GO:0006636: unsaturated fatty acid biosynthetic process1.18E-02
105GO:0005992: trehalose biosynthetic process1.27E-02
106GO:0009116: nucleoside metabolic process1.27E-02
107GO:0051302: regulation of cell division1.37E-02
108GO:0015031: protein transport1.45E-02
109GO:0098542: defense response to other organism1.46E-02
110GO:0048278: vesicle docking1.46E-02
111GO:0031408: oxylipin biosynthetic process1.46E-02
112GO:0051321: meiotic cell cycle1.46E-02
113GO:0010017: red or far-red light signaling pathway1.56E-02
114GO:0009814: defense response, incompatible interaction1.56E-02
115GO:0030433: ubiquitin-dependent ERAD pathway1.56E-02
116GO:0009625: response to insect1.66E-02
117GO:0010227: floral organ abscission1.66E-02
118GO:0006012: galactose metabolic process1.66E-02
119GO:0071215: cellular response to abscisic acid stimulus1.66E-02
120GO:0045492: xylan biosynthetic process1.76E-02
121GO:0009306: protein secretion1.76E-02
122GO:0042147: retrograde transport, endosome to Golgi1.86E-02
123GO:0009058: biosynthetic process2.01E-02
124GO:0010197: polar nucleus fusion2.07E-02
125GO:0009960: endosperm development2.07E-02
126GO:0061025: membrane fusion2.18E-02
127GO:0048544: recognition of pollen2.18E-02
128GO:0002229: defense response to oomycetes2.41E-02
129GO:0000302: response to reactive oxygen species2.41E-02
130GO:0006891: intra-Golgi vesicle-mediated transport2.41E-02
131GO:1901657: glycosyl compound metabolic process2.64E-02
132GO:0071281: cellular response to iron ion2.64E-02
133GO:0006904: vesicle docking involved in exocytosis2.88E-02
134GO:0000910: cytokinesis3.01E-02
135GO:0016579: protein deubiquitination3.01E-02
136GO:0001666: response to hypoxia3.13E-02
137GO:0009816: defense response to bacterium, incompatible interaction3.26E-02
138GO:0006906: vesicle fusion3.39E-02
139GO:0006974: cellular response to DNA damage stimulus3.39E-02
140GO:0006888: ER to Golgi vesicle-mediated transport3.52E-02
141GO:0008219: cell death3.78E-02
142GO:0018298: protein-chromophore linkage3.78E-02
143GO:0000724: double-strand break repair via homologous recombination4.33E-02
144GO:0016310: phosphorylation4.35E-02
145GO:0006099: tricarboxylic acid cycle4.62E-02
146GO:0006839: mitochondrial transport4.91E-02
RankGO TermAdjusted P value
1GO:0061604: molybdopterin-synthase sulfurtransferase activity0.00E+00
2GO:0000224: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity0.00E+00
3GO:0010298: dihydrocamalexic acid decarboxylase activity0.00E+00
4GO:0061605: molybdopterin-synthase adenylyltransferase activity0.00E+00
5GO:0016621: cinnamoyl-CoA reductase activity1.74E-04
6GO:0010285: L,L-diaminopimelate aminotransferase activity2.43E-04
7GO:0004566: beta-glucuronidase activity5.39E-04
8GO:0009883: red or far-red light photoreceptor activity5.39E-04
9GO:0051879: Hsp90 protein binding5.39E-04
10GO:0052640: salicylic acid glucosyltransferase (glucoside-forming) activity5.39E-04
11GO:0015117: thiosulfate transmembrane transporter activity5.39E-04
12GO:0008428: ribonuclease inhibitor activity5.39E-04
13GO:0004338: glucan exo-1,3-beta-glucosidase activity5.39E-04
14GO:1901677: phosphate transmembrane transporter activity5.39E-04
15GO:0047443: 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity5.39E-04
16GO:0008265: Mo-molybdopterin cofactor sulfurase activity8.75E-04
17GO:0005310: dicarboxylic acid transmembrane transporter activity8.75E-04
18GO:0015141: succinate transmembrane transporter activity8.75E-04
19GO:0004441: inositol-1,4-bisphosphate 1-phosphatase activity8.75E-04
20GO:0008020: G-protein coupled photoreceptor activity8.75E-04
21GO:0017077: oxidative phosphorylation uncoupler activity1.25E-03
22GO:0004749: ribose phosphate diphosphokinase activity1.25E-03
23GO:0004021: L-alanine:2-oxoglutarate aminotransferase activity1.25E-03
24GO:0004449: isocitrate dehydrogenase (NAD+) activity1.25E-03
25GO:0015131: oxaloacetate transmembrane transporter activity1.25E-03
26GO:0004792: thiosulfate sulfurtransferase activity1.25E-03
27GO:0015368: calcium:cation antiporter activity1.67E-03
28GO:0015369: calcium:proton antiporter activity1.67E-03
29GO:0046527: glucosyltransferase activity1.67E-03
30GO:0009916: alternative oxidase activity1.67E-03
31GO:0008641: small protein activating enzyme activity2.13E-03
32GO:0008948: oxaloacetate decarboxylase activity2.13E-03
33GO:0004040: amidase activity2.13E-03
34GO:0004372: glycine hydroxymethyltransferase activity2.13E-03
35GO:0045300: acyl-[acyl-carrier-protein] desaturase activity2.13E-03
36GO:0031386: protein tag2.13E-03
37GO:0048040: UDP-glucuronate decarboxylase activity2.62E-03
38GO:0008474: palmitoyl-(protein) hydrolase activity2.62E-03
39GO:0035252: UDP-xylosyltransferase activity2.62E-03
40GO:0070403: NAD+ binding3.15E-03
41GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity3.15E-03
42GO:0004656: procollagen-proline 4-dioxygenase activity3.15E-03
43GO:0102425: myricetin 3-O-glucosyltransferase activity3.72E-03
44GO:0102360: daphnetin 3-O-glucosyltransferase activity3.72E-03
45GO:0009881: photoreceptor activity3.72E-03
46GO:0003872: 6-phosphofructokinase activity3.72E-03
47GO:0015140: malate transmembrane transporter activity3.72E-03
48GO:0004620: phospholipase activity3.72E-03
49GO:0030170: pyridoxal phosphate binding3.81E-03
50GO:0016301: kinase activity4.07E-03
51GO:0004034: aldose 1-epimerase activity4.31E-03
52GO:0047893: flavonol 3-O-glucosyltransferase activity4.31E-03
53GO:0004525: ribonuclease III activity4.31E-03
54GO:0015491: cation:cation antiporter activity4.31E-03
55GO:0030247: polysaccharide binding4.37E-03
56GO:0004568: chitinase activity6.99E-03
57GO:0004364: glutathione transferase activity7.59E-03
58GO:0008559: xenobiotic-transporting ATPase activity7.73E-03
59GO:0047372: acylglycerol lipase activity7.73E-03
60GO:0015116: sulfate transmembrane transporter activity8.49E-03
61GO:0000155: phosphorelay sensor kinase activity9.29E-03
62GO:0004565: beta-galactosidase activity9.29E-03
63GO:0031624: ubiquitin conjugating enzyme binding1.01E-02
64GO:0042973: glucan endo-1,3-beta-D-glucosidase activity1.01E-02
65GO:0004867: serine-type endopeptidase inhibitor activity1.10E-02
66GO:0003712: transcription cofactor activity1.10E-02
67GO:0004725: protein tyrosine phosphatase activity1.18E-02
68GO:0031625: ubiquitin protein ligase binding1.18E-02
69GO:0031418: L-ascorbic acid binding1.27E-02
70GO:0080043: quercetin 3-O-glucosyltransferase activity1.39E-02
71GO:0080044: quercetin 7-O-glucosyltransferase activity1.39E-02
72GO:0035251: UDP-glucosyltransferase activity1.46E-02
73GO:0036459: thiol-dependent ubiquitinyl hydrolase activity1.46E-02
74GO:0008810: cellulase activity1.66E-02
75GO:0030246: carbohydrate binding1.67E-02
76GO:0003727: single-stranded RNA binding1.76E-02
77GO:0004499: N,N-dimethylaniline monooxygenase activity1.76E-02
78GO:0003924: GTPase activity1.89E-02
79GO:0005524: ATP binding2.02E-02
80GO:0016853: isomerase activity2.18E-02
81GO:0004843: thiol-dependent ubiquitin-specific protease activity2.41E-02
82GO:0005509: calcium ion binding2.72E-02
83GO:0008483: transaminase activity2.88E-02
84GO:0004702: signal transducer, downstream of receptor, with serine/threonine kinase activity2.88E-02
85GO:0008194: UDP-glycosyltransferase activity2.95E-02
86GO:0042626: ATPase activity, coupled to transmembrane movement of substances3.35E-02
87GO:0102483: scopolin beta-glucosidase activity3.52E-02
88GO:0043531: ADP binding4.46E-02
89GO:0016706: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors4.48E-02
90GO:0000149: SNARE binding4.76E-02
91GO:0004712: protein serine/threonine/tyrosine kinase activity4.76E-02
92GO:0008422: beta-glucosidase activity4.76E-02
93GO:0050661: NADP binding4.91E-02
94GO:0016740: transferase activity4.93E-02
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Gene type



Gene DE type