GO Enrichment Analysis of Co-expressed Genes with
AT4G21430
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0010323: negative regulation of isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 0.00E+00 |
| 2 | GO:0071951: conversion of methionyl-tRNA to N-formyl-methionyl-tRNA | 0.00E+00 |
| 3 | GO:0090322: regulation of superoxide metabolic process | 0.00E+00 |
| 4 | GO:0080127: fruit septum development | 0.00E+00 |
| 5 | GO:0048598: embryonic morphogenesis | 3.90E-05 |
| 6 | GO:0033206: meiotic cytokinesis | 3.90E-05 |
| 7 | GO:0006430: lysyl-tRNA aminoacylation | 3.90E-05 |
| 8 | GO:0010501: RNA secondary structure unwinding | 1.71E-04 |
| 9 | GO:0009152: purine ribonucleotide biosynthetic process | 2.48E-04 |
| 10 | GO:0007276: gamete generation | 2.48E-04 |
| 11 | GO:0009102: biotin biosynthetic process | 2.48E-04 |
| 12 | GO:0009956: radial pattern formation | 3.33E-04 |
| 13 | GO:0006808: regulation of nitrogen utilization | 3.33E-04 |
| 14 | GO:0016120: carotene biosynthetic process | 4.25E-04 |
| 15 | GO:0006097: glyoxylate cycle | 4.25E-04 |
| 16 | GO:0016123: xanthophyll biosynthetic process | 4.25E-04 |
| 17 | GO:0003006: developmental process involved in reproduction | 5.22E-04 |
| 18 | GO:0009643: photosynthetic acclimation | 5.22E-04 |
| 19 | GO:2000033: regulation of seed dormancy process | 6.22E-04 |
| 20 | GO:0010310: regulation of hydrogen peroxide metabolic process | 6.22E-04 |
| 21 | GO:0010098: suspensor development | 7.28E-04 |
| 22 | GO:0006401: RNA catabolic process | 7.28E-04 |
| 23 | GO:0006629: lipid metabolic process | 8.23E-04 |
| 24 | GO:0006353: DNA-templated transcription, termination | 8.37E-04 |
| 25 | GO:0009938: negative regulation of gibberellic acid mediated signaling pathway | 8.37E-04 |
| 26 | GO:0006402: mRNA catabolic process | 8.37E-04 |
| 27 | GO:0010492: maintenance of shoot apical meristem identity | 8.37E-04 |
| 28 | GO:0006364: rRNA processing | 9.36E-04 |
| 29 | GO:0010233: phloem transport | 9.50E-04 |
| 30 | GO:0010497: plasmodesmata-mediated intercellular transport | 9.50E-04 |
| 31 | GO:0048507: meristem development | 1.07E-03 |
| 32 | GO:0000373: Group II intron splicing | 1.07E-03 |
| 33 | GO:0031425: chloroplast RNA processing | 1.19E-03 |
| 34 | GO:0006535: cysteine biosynthetic process from serine | 1.31E-03 |
| 35 | GO:0045036: protein targeting to chloroplast | 1.31E-03 |
| 36 | GO:0016441: posttranscriptional gene silencing | 1.31E-03 |
| 37 | GO:0045037: protein import into chloroplast stroma | 1.58E-03 |
| 38 | GO:0010582: floral meristem determinacy | 1.58E-03 |
| 39 | GO:0048467: gynoecium development | 1.86E-03 |
| 40 | GO:0009933: meristem structural organization | 1.86E-03 |
| 41 | GO:0009887: animal organ morphogenesis | 1.86E-03 |
| 42 | GO:0010540: basipetal auxin transport | 1.86E-03 |
| 43 | GO:0009825: multidimensional cell growth | 2.01E-03 |
| 44 | GO:0040008: regulation of growth | 2.13E-03 |
| 45 | GO:0006636: unsaturated fatty acid biosynthetic process | 2.16E-03 |
| 46 | GO:0009863: salicylic acid mediated signaling pathway | 2.32E-03 |
| 47 | GO:0010187: negative regulation of seed germination | 2.32E-03 |
| 48 | GO:2000377: regulation of reactive oxygen species metabolic process | 2.32E-03 |
| 49 | GO:0019344: cysteine biosynthetic process | 2.32E-03 |
| 50 | GO:0006418: tRNA aminoacylation for protein translation | 2.48E-03 |
| 51 | GO:0009793: embryo development ending in seed dormancy | 2.50E-03 |
| 52 | GO:0042127: regulation of cell proliferation | 3.15E-03 |
| 53 | GO:0009658: chloroplast organization | 3.42E-03 |
| 54 | GO:0008033: tRNA processing | 3.50E-03 |
| 55 | GO:0010305: leaf vascular tissue pattern formation | 3.69E-03 |
| 56 | GO:0007169: transmembrane receptor protein tyrosine kinase signaling pathway | 4.37E-03 |
| 57 | GO:0031047: gene silencing by RNA | 4.45E-03 |
| 58 | GO:0019760: glucosinolate metabolic process | 4.85E-03 |
| 59 | GO:0010029: regulation of seed germination | 5.69E-03 |
| 60 | GO:0015995: chlorophyll biosynthetic process | 6.13E-03 |
| 61 | GO:0016311: dephosphorylation | 6.35E-03 |
| 62 | GO:0006397: mRNA processing | 6.50E-03 |
| 63 | GO:0048481: plant ovule development | 6.58E-03 |
| 64 | GO:0006810: transport | 6.62E-03 |
| 65 | GO:0006499: N-terminal protein myristoylation | 7.04E-03 |
| 66 | GO:0010218: response to far red light | 7.04E-03 |
| 67 | GO:0009867: jasmonic acid mediated signaling pathway | 7.75E-03 |
| 68 | GO:0006099: tricarboxylic acid cycle | 7.99E-03 |
| 69 | GO:0051707: response to other organism | 9.25E-03 |
| 70 | GO:0009926: auxin polar transport | 9.25E-03 |
| 71 | GO:0009908: flower development | 9.99E-03 |
| 72 | GO:0009965: leaf morphogenesis | 1.00E-02 |
| 73 | GO:0042538: hyperosmotic salinity response | 1.09E-02 |
| 74 | GO:0045893: positive regulation of transcription, DNA-templated | 1.27E-02 |
| 75 | GO:0009740: gibberellic acid mediated signaling pathway | 1.40E-02 |
| 76 | GO:0006396: RNA processing | 1.49E-02 |
| 77 | GO:0009058: biosynthetic process | 1.78E-02 |
| 78 | GO:0016036: cellular response to phosphate starvation | 2.05E-02 |
| 79 | GO:0009739: response to gibberellin | 2.34E-02 |
| 80 | GO:0007049: cell cycle | 3.18E-02 |
| 81 | GO:0009723: response to ethylene | 3.27E-02 |
| 82 | GO:0080167: response to karrikin | 3.43E-02 |
| 83 | GO:0015979: photosynthesis | 3.77E-02 |
| 84 | GO:0006355: regulation of transcription, DNA-templated | 4.58E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004141: dethiobiotin synthase activity | 0.00E+00 |
| 2 | GO:0004479: methionyl-tRNA formyltransferase activity | 0.00E+00 |
| 3 | GO:0004808: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity | 0.00E+00 |
| 4 | GO:0004474: malate synthase activity | 0.00E+00 |
| 5 | GO:0004015: adenosylmethionine-8-amino-7-oxononanoate transaminase activity | 0.00E+00 |
| 6 | GO:0004824: lysine-tRNA ligase activity | 3.90E-05 |
| 7 | GO:0004654: polyribonucleotide nucleotidyltransferase activity | 3.90E-05 |
| 8 | GO:0042389: omega-3 fatty acid desaturase activity | 9.72E-05 |
| 9 | GO:0016742: hydroxymethyl-, formyl- and related transferase activity | 1.68E-04 |
| 10 | GO:0008864: formyltetrahydrofolate deformylase activity | 1.68E-04 |
| 11 | GO:0004004: ATP-dependent RNA helicase activity | 3.97E-04 |
| 12 | GO:0004124: cysteine synthase activity | 6.22E-04 |
| 13 | GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | 9.50E-04 |
| 14 | GO:0003724: RNA helicase activity | 9.50E-04 |
| 15 | GO:0000989: transcription factor activity, transcription factor binding | 1.07E-03 |
| 16 | GO:0016627: oxidoreductase activity, acting on the CH-CH group of donors | 1.07E-03 |
| 17 | GO:0008026: ATP-dependent helicase activity | 1.38E-03 |
| 18 | GO:0000175: 3'-5'-exoribonuclease activity | 1.72E-03 |
| 19 | GO:0003725: double-stranded RNA binding | 1.72E-03 |
| 20 | GO:0030170: pyridoxal phosphate binding | 1.80E-03 |
| 21 | GO:0000977: RNA polymerase II regulatory region sequence-specific DNA binding | 1.84E-03 |
| 22 | GO:0004812: aminoacyl-tRNA ligase activity | 3.32E-03 |
| 23 | GO:0003723: RNA binding | 4.28E-03 |
| 24 | GO:0015450: P-P-bond-hydrolysis-driven protein transmembrane transporter activity | 6.58E-03 |
| 25 | GO:0003993: acid phosphatase activity | 7.99E-03 |
| 26 | GO:0043565: sequence-specific DNA binding | 8.32E-03 |
| 27 | GO:0043621: protein self-association | 9.77E-03 |
| 28 | GO:0003690: double-stranded DNA binding | 1.17E-02 |
| 29 | GO:0016298: lipase activity | 1.17E-02 |
| 30 | GO:0003779: actin binding | 1.43E-02 |
| 31 | GO:0005525: GTP binding | 1.82E-02 |
| 32 | GO:0003700: transcription factor activity, sequence-specific DNA binding | 1.89E-02 |
| 33 | GO:0003677: DNA binding | 2.61E-02 |
| 34 | GO:0000287: magnesium ion binding | 2.90E-02 |
| 35 | GO:0042803: protein homodimerization activity | 4.03E-02 |
| 36 | GO:0004722: protein serine/threonine phosphatase activity | 4.16E-02 |