GO Enrichment Analysis of Co-expressed Genes with
AT4G19710
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0051484: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway involved in terpenoid biosynthetic process | 0.00E+00 |
| 2 | GO:0034337: RNA folding | 0.00E+00 |
| 3 | GO:0002184: cytoplasmic translational termination | 0.00E+00 |
| 4 | GO:0006849: plasma membrane pyruvate transport | 0.00E+00 |
| 5 | GO:0016553: base conversion or substitution editing | 0.00E+00 |
| 6 | GO:0015995: chlorophyll biosynthetic process | 1.71E-10 |
| 7 | GO:0009735: response to cytokinin | 6.22E-06 |
| 8 | GO:0010304: PSII associated light-harvesting complex II catabolic process | 1.09E-05 |
| 9 | GO:0048564: photosystem I assembly | 2.83E-05 |
| 10 | GO:0010027: thylakoid membrane organization | 3.08E-05 |
| 11 | GO:0006783: heme biosynthetic process | 4.54E-05 |
| 12 | GO:0010206: photosystem II repair | 4.54E-05 |
| 13 | GO:0010205: photoinhibition | 5.55E-05 |
| 14 | GO:0006779: porphyrin-containing compound biosynthetic process | 5.55E-05 |
| 15 | GO:1902478: negative regulation of defense response to bacterium, incompatible interaction | 6.42E-05 |
| 16 | GO:0031426: polycistronic mRNA processing | 6.42E-05 |
| 17 | GO:0043489: RNA stabilization | 6.42E-05 |
| 18 | GO:1904966: positive regulation of vitamin E biosynthetic process | 6.42E-05 |
| 19 | GO:0000481: maturation of 5S rRNA | 6.42E-05 |
| 20 | GO:1904964: positive regulation of phytol biosynthetic process | 6.42E-05 |
| 21 | GO:0065002: intracellular protein transmembrane transport | 6.42E-05 |
| 22 | GO:0043686: co-translational protein modification | 6.42E-05 |
| 23 | GO:0043953: protein transport by the Tat complex | 6.42E-05 |
| 24 | GO:0051775: response to redox state | 6.42E-05 |
| 25 | GO:0006782: protoporphyrinogen IX biosynthetic process | 6.67E-05 |
| 26 | GO:0018119: peptidyl-cysteine S-nitrosylation | 7.90E-05 |
| 27 | GO:0019253: reductive pentose-phosphate cycle | 1.23E-04 |
| 28 | GO:1902326: positive regulation of chlorophyll biosynthetic process | 1.55E-04 |
| 29 | GO:0015979: photosynthesis | 1.75E-04 |
| 30 | GO:0006096: glycolytic process | 1.92E-04 |
| 31 | GO:0034051: negative regulation of plant-type hypersensitive response | 2.63E-04 |
| 32 | GO:0000913: preprophase band assembly | 2.63E-04 |
| 33 | GO:0031022: nuclear migration along microfilament | 2.63E-04 |
| 34 | GO:0006020: inositol metabolic process | 3.82E-04 |
| 35 | GO:1901000: regulation of response to salt stress | 3.82E-04 |
| 36 | GO:0006107: oxaloacetate metabolic process | 3.82E-04 |
| 37 | GO:0010239: chloroplast mRNA processing | 3.82E-04 |
| 38 | GO:0033014: tetrapyrrole biosynthetic process | 3.82E-04 |
| 39 | GO:0019252: starch biosynthetic process | 4.13E-04 |
| 40 | GO:0055114: oxidation-reduction process | 4.25E-04 |
| 41 | GO:0006633: fatty acid biosynthetic process | 4.48E-04 |
| 42 | GO:0030163: protein catabolic process | 5.01E-04 |
| 43 | GO:0006021: inositol biosynthetic process | 5.10E-04 |
| 44 | GO:0006734: NADH metabolic process | 5.10E-04 |
| 45 | GO:0010021: amylopectin biosynthetic process | 5.10E-04 |
| 46 | GO:0009409: response to cold | 6.36E-04 |
| 47 | GO:0006564: L-serine biosynthetic process | 6.45E-04 |
| 48 | GO:0009904: chloroplast accumulation movement | 6.45E-04 |
| 49 | GO:0010236: plastoquinone biosynthetic process | 6.45E-04 |
| 50 | GO:0031365: N-terminal protein amino acid modification | 6.45E-04 |
| 51 | GO:0000304: response to singlet oxygen | 6.45E-04 |
| 52 | GO:0006014: D-ribose metabolic process | 7.90E-04 |
| 53 | GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 7.90E-04 |
| 54 | GO:0000470: maturation of LSU-rRNA | 7.90E-04 |
| 55 | GO:0046855: inositol phosphate dephosphorylation | 7.90E-04 |
| 56 | GO:0009817: defense response to fungus, incompatible interaction | 8.14E-04 |
| 57 | GO:0009903: chloroplast avoidance movement | 9.40E-04 |
| 58 | GO:0009854: oxidative photosynthetic carbon pathway | 9.40E-04 |
| 59 | GO:1901259: chloroplast rRNA processing | 9.40E-04 |
| 60 | GO:0009772: photosynthetic electron transport in photosystem II | 1.10E-03 |
| 61 | GO:0032508: DNA duplex unwinding | 1.26E-03 |
| 62 | GO:2000070: regulation of response to water deprivation | 1.26E-03 |
| 63 | GO:0016559: peroxisome fission | 1.26E-03 |
| 64 | GO:0032544: plastid translation | 1.44E-03 |
| 65 | GO:0006754: ATP biosynthetic process | 1.62E-03 |
| 66 | GO:0048507: meristem development | 1.62E-03 |
| 67 | GO:0006412: translation | 1.86E-03 |
| 68 | GO:0006535: cysteine biosynthetic process from serine | 2.01E-03 |
| 69 | GO:0009773: photosynthetic electron transport in photosystem I | 2.21E-03 |
| 70 | GO:0072593: reactive oxygen species metabolic process | 2.21E-03 |
| 71 | GO:0006790: sulfur compound metabolic process | 2.42E-03 |
| 72 | GO:0006108: malate metabolic process | 2.64E-03 |
| 73 | GO:0006006: glucose metabolic process | 2.64E-03 |
| 74 | GO:0018107: peptidyl-threonine phosphorylation | 2.64E-03 |
| 75 | GO:0009718: anthocyanin-containing compound biosynthetic process | 2.64E-03 |
| 76 | GO:0010020: chloroplast fission | 2.87E-03 |
| 77 | GO:0046854: phosphatidylinositol phosphorylation | 3.09E-03 |
| 78 | GO:0006289: nucleotide-excision repair | 3.57E-03 |
| 79 | GO:0019344: cysteine biosynthetic process | 3.57E-03 |
| 80 | GO:0046686: response to cadmium ion | 3.71E-03 |
| 81 | GO:0008299: isoprenoid biosynthetic process | 3.82E-03 |
| 82 | GO:0007017: microtubule-based process | 3.82E-03 |
| 83 | GO:0010431: seed maturation | 4.08E-03 |
| 84 | GO:0031408: oxylipin biosynthetic process | 4.08E-03 |
| 85 | GO:0035428: hexose transmembrane transport | 4.34E-03 |
| 86 | GO:0010228: vegetative to reproductive phase transition of meristem | 4.39E-03 |
| 87 | GO:0051028: mRNA transport | 5.15E-03 |
| 88 | GO:0046323: glucose import | 5.72E-03 |
| 89 | GO:0015986: ATP synthesis coupled proton transport | 6.01E-03 |
| 90 | GO:0007018: microtubule-based movement | 6.01E-03 |
| 91 | GO:0006814: sodium ion transport | 6.01E-03 |
| 92 | GO:0009791: post-embryonic development | 6.31E-03 |
| 93 | GO:0009658: chloroplast organization | 6.48E-03 |
| 94 | GO:0016032: viral process | 6.92E-03 |
| 95 | GO:0009567: double fertilization forming a zygote and endosperm | 7.55E-03 |
| 96 | GO:0000910: cytokinesis | 8.21E-03 |
| 97 | GO:0044550: secondary metabolite biosynthetic process | 8.74E-03 |
| 98 | GO:0018298: protein-chromophore linkage | 1.03E-02 |
| 99 | GO:0006508: proteolysis | 1.04E-02 |
| 100 | GO:0009631: cold acclimation | 1.14E-02 |
| 101 | GO:0016051: carbohydrate biosynthetic process | 1.22E-02 |
| 102 | GO:0009853: photorespiration | 1.22E-02 |
| 103 | GO:0045087: innate immune response | 1.22E-02 |
| 104 | GO:0006397: mRNA processing | 1.24E-02 |
| 105 | GO:0006099: tricarboxylic acid cycle | 1.25E-02 |
| 106 | GO:0015031: protein transport | 1.26E-02 |
| 107 | GO:0009744: response to sucrose | 1.45E-02 |
| 108 | GO:0009416: response to light stimulus | 2.11E-02 |
| 109 | GO:0018105: peptidyl-serine phosphorylation | 2.36E-02 |
| 110 | GO:0006396: RNA processing | 2.36E-02 |
| 111 | GO:0006457: protein folding | 2.74E-02 |
| 112 | GO:0009790: embryo development | 3.02E-02 |
| 113 | GO:0007623: circadian rhythm | 3.41E-02 |
| 114 | GO:0009451: RNA modification | 3.46E-02 |
| 115 | GO:0043161: proteasome-mediated ubiquitin-dependent protein catabolic process | 3.69E-02 |
| 116 | GO:0008380: RNA splicing | 3.86E-02 |
| 117 | GO:0010468: regulation of gene expression | 3.86E-02 |
| 118 | GO:0042742: defense response to bacterium | 4.27E-02 |
| 119 | GO:0042254: ribosome biogenesis | 4.71E-02 |
| Rank | GO Term | Adjusted P value |
|---|---|---|
| 1 | GO:0004314: [acyl-carrier-protein] S-malonyltransferase activity | 0.00E+00 |
| 2 | GO:0004318: enoyl-[acyl-carrier-protein] reductase (NADH) activity | 0.00E+00 |
| 3 | GO:0004740: pyruvate dehydrogenase (acetyl-transferring) kinase activity | 0.00E+00 |
| 4 | GO:0046554: malate dehydrogenase (NADP+) activity | 0.00E+00 |
| 5 | GO:0016631: enoyl-[acyl-carrier-protein] reductase activity | 0.00E+00 |
| 6 | GO:0030604: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity | 0.00E+00 |
| 7 | GO:0008887: glycerate kinase activity | 0.00E+00 |
| 8 | GO:0016851: magnesium chelatase activity | 2.19E-06 |
| 9 | GO:0019843: rRNA binding | 2.25E-05 |
| 10 | GO:0004222: metalloendopeptidase activity | 5.46E-05 |
| 11 | GO:0008746: NAD(P)+ transhydrogenase activity | 6.42E-05 |
| 12 | GO:0008886: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity | 6.42E-05 |
| 13 | GO:0004729: oxygen-dependent protoporphyrinogen oxidase activity | 6.42E-05 |
| 14 | GO:0004325: ferrochelatase activity | 6.42E-05 |
| 15 | GO:0004853: uroporphyrinogen decarboxylase activity | 6.42E-05 |
| 16 | GO:0042586: peptide deformylase activity | 6.42E-05 |
| 17 | GO:0016887: ATPase activity | 6.85E-05 |
| 18 | GO:0008266: poly(U) RNA binding | 1.23E-04 |
| 19 | GO:0050017: L-3-cyanoalanine synthase activity | 1.55E-04 |
| 20 | GO:0004618: phosphoglycerate kinase activity | 1.55E-04 |
| 21 | GO:0009977: proton motive force dependent protein transmembrane transporter activity | 1.55E-04 |
| 22 | GO:0004617: phosphoglycerate dehydrogenase activity | 1.55E-04 |
| 23 | GO:0052832: inositol monophosphate 3-phosphatase activity | 1.55E-04 |
| 24 | GO:0033201: alpha-1,4-glucan synthase activity | 1.55E-04 |
| 25 | GO:0008934: inositol monophosphate 1-phosphatase activity | 1.55E-04 |
| 26 | GO:0052833: inositol monophosphate 4-phosphatase activity | 1.55E-04 |
| 27 | GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity | 1.55E-04 |
| 28 | GO:0004176: ATP-dependent peptidase activity | 2.16E-04 |
| 29 | GO:0070402: NADPH binding | 2.63E-04 |
| 30 | GO:0004324: ferredoxin-NADP+ reductase activity | 2.63E-04 |
| 31 | GO:0004373: glycogen (starch) synthase activity | 2.63E-04 |
| 32 | GO:0050833: pyruvate transmembrane transporter activity | 2.63E-04 |
| 33 | GO:0043023: ribosomal large subunit binding | 3.82E-04 |
| 34 | GO:0008508: bile acid:sodium symporter activity | 3.82E-04 |
| 35 | GO:0048027: mRNA 5'-UTR binding | 3.82E-04 |
| 36 | GO:0043495: protein anchor | 5.10E-04 |
| 37 | GO:0070628: proteasome binding | 5.10E-04 |
| 38 | GO:0009011: starch synthase activity | 5.10E-04 |
| 39 | GO:0008237: metallopeptidase activity | 5.65E-04 |
| 40 | GO:0003959: NADPH dehydrogenase activity | 6.45E-04 |
| 41 | GO:0016615: malate dehydrogenase activity | 7.90E-04 |
| 42 | GO:0031593: polyubiquitin binding | 7.90E-04 |
| 43 | GO:0004124: cysteine synthase activity | 9.40E-04 |
| 44 | GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity | 9.40E-04 |
| 45 | GO:0004747: ribokinase activity | 9.40E-04 |
| 46 | GO:0030060: L-malate dehydrogenase activity | 9.40E-04 |
| 47 | GO:0009927: histidine phosphotransfer kinase activity | 9.40E-04 |
| 48 | GO:0019899: enzyme binding | 1.10E-03 |
| 49 | GO:0003723: RNA binding | 1.21E-03 |
| 50 | GO:0008865: fructokinase activity | 1.26E-03 |
| 51 | GO:0030955: potassium ion binding | 1.81E-03 |
| 52 | GO:0004028: 3-chloroallyl aldehyde dehydrogenase activity | 1.81E-03 |
| 53 | GO:0004743: pyruvate kinase activity | 1.81E-03 |
| 54 | GO:0030234: enzyme regulator activity | 2.01E-03 |
| 55 | GO:0031072: heat shock protein binding | 2.64E-03 |
| 56 | GO:0005524: ATP binding | 3.44E-03 |
| 57 | GO:0003729: mRNA binding | 3.46E-03 |
| 58 | GO:0043130: ubiquitin binding | 3.57E-03 |
| 59 | GO:0008017: microtubule binding | 4.39E-03 |
| 60 | GO:0022891: substrate-specific transmembrane transporter activity | 4.60E-03 |
| 61 | GO:0016740: transferase activity | 4.87E-03 |
| 62 | GO:0042802: identical protein binding | 5.33E-03 |
| 63 | GO:0003735: structural constituent of ribosome | 5.37E-03 |
| 64 | GO:0046933: proton-transporting ATP synthase activity, rotational mechanism | 5.72E-03 |
| 65 | GO:0016853: isomerase activity | 6.01E-03 |
| 66 | GO:0005355: glucose transmembrane transporter activity | 6.01E-03 |
| 67 | GO:0005525: GTP binding | 7.12E-03 |
| 68 | GO:0003684: damaged DNA binding | 7.55E-03 |
| 69 | GO:0005200: structural constituent of cytoskeleton | 7.88E-03 |
| 70 | GO:0016597: amino acid binding | 8.21E-03 |
| 71 | GO:0016168: chlorophyll binding | 8.88E-03 |
| 72 | GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen | 1.04E-02 |
| 73 | GO:0030145: manganese ion binding | 1.14E-02 |
| 74 | GO:0016614: oxidoreductase activity, acting on CH-OH group of donors | 1.14E-02 |
| 75 | GO:0003924: GTPase activity | 1.19E-02 |
| 76 | GO:0016491: oxidoreductase activity | 1.32E-02 |
| 77 | GO:0005198: structural molecule activity | 1.58E-02 |
| 78 | GO:0003755: peptidyl-prolyl cis-trans isomerase activity | 1.62E-02 |
| 79 | GO:0051287: NAD binding | 1.66E-02 |
| 80 | GO:0003777: microtubule motor activity | 1.93E-02 |
| 81 | GO:0051082: unfolded protein binding | 2.31E-02 |
| 82 | GO:0030170: pyridoxal phosphate binding | 2.92E-02 |
| 83 | GO:0005507: copper ion binding | 3.01E-02 |
| 84 | GO:0019825: oxygen binding | 3.01E-02 |
| 85 | GO:0015144: carbohydrate transmembrane transporter activity | 3.08E-02 |
| 86 | GO:0046872: metal ion binding | 3.28E-02 |
| 87 | GO:0005351: sugar:proton symporter activity | 3.35E-02 |
| 88 | GO:0005506: iron ion binding | 4.20E-02 |
| 89 | GO:0000287: magnesium ion binding | 4.58E-02 |