co-expression network

GO Enrichment Analysis of Co-expressed Genes with

AT4G19020

GO-BP

GO-MF

GO-CC

Rank	GO Term	Adjusted P value
1	GO:0016553: base conversion or substitution editing	0.00E+00
2	GO:0033494: ferulate metabolic process	0.00E+00
3	GO:0090470: shoot organ boundary specification	0.00E+00
4	GO:2000042: negative regulation of double-strand break repair via homologous recombination	0.00E+00
5	GO:1903508: positive regulation of nucleic acid-templated transcription	0.00E+00
6	GO:0046471: phosphatidylglycerol metabolic process	0.00E+00
7	GO:0052865: 1-deoxy-D-xylulose 5-phosphate biosynthetic process	0.00E+00
8	GO:0034337: RNA folding	0.00E+00
9	GO:0006982: response to lipid hydroperoxide	0.00E+00
10	GO:0010335: response to non-ionic osmotic stress	0.00E+00
11	GO:1901918: negative regulation of exoribonuclease activity	0.00E+00
12	GO:0015995: chlorophyll biosynthetic process	7.02E-09
13	GO:0055114: oxidation-reduction process	1.43E-05
14	GO:0006094: gluconeogenesis	6.51E-05
15	GO:0006021: inositol biosynthetic process	6.70E-05
16	GO:0010027: thylakoid membrane organization	7.14E-05
17	GO:0010207: photosystem II assembly	7.88E-05
18	GO:0010143: cutin biosynthetic process	7.88E-05
19	GO:0009904: chloroplast accumulation movement	1.05E-04
20	GO:0009658: chloroplast organization	1.39E-04
21	GO:0046855: inositol phosphate dephosphorylation	1.52E-04
22	GO:0009903: chloroplast avoidance movement	2.07E-04
23	GO:0015979: photosynthesis	3.03E-04
24	GO:0046467: membrane lipid biosynthetic process	3.24E-04
25	GO:1902478: negative regulation of defense response to bacterium, incompatible interaction	3.24E-04
26	GO:0031426: polycistronic mRNA processing	3.24E-04
27	GO:0043489: RNA stabilization	3.24E-04
28	GO:1904966: positive regulation of vitamin E biosynthetic process	3.24E-04
29	GO:0043953: protein transport by the Tat complex	3.24E-04
30	GO:0000481: maturation of 5S rRNA	3.24E-04
31	GO:1904964: positive regulation of phytol biosynthetic process	3.24E-04
32	GO:0065002: intracellular protein transmembrane transport	3.24E-04
33	GO:0043087: regulation of GTPase activity	3.24E-04
34	GO:0071461: cellular response to redox state	3.24E-04
35	GO:0071277: cellular response to calcium ion	3.24E-04
36	GO:0046167: glycerol-3-phosphate biosynthetic process	3.24E-04
37	GO:0043007: maintenance of rDNA	3.24E-04
38	GO:1902458: positive regulation of stomatal opening	3.24E-04
39	GO:0048363: mucilage pectin metabolic process	3.24E-04
40	GO:0010362: negative regulation of anion channel activity by blue light	3.24E-04
41	GO:0015969: guanosine tetraphosphate metabolic process	3.24E-04
42	GO:0009704: de-etiolation	3.40E-04
43	GO:0016559: peroxisome fission	3.40E-04
44	GO:0045489: pectin biosynthetic process	3.42E-04
45	GO:0000719: photoreactive repair	7.07E-04
46	GO:1902326: positive regulation of chlorophyll biosynthetic process	7.07E-04
47	GO:0010541: acropetal auxin transport	7.07E-04
48	GO:0071668: plant-type cell wall assembly	7.07E-04
49	GO:0006650: glycerophospholipid metabolic process	7.07E-04
50	GO:0010155: regulation of proton transport	7.07E-04
51	GO:0006729: tetrahydrobiopterin biosynthetic process	7.07E-04
52	GO:1903426: regulation of reactive oxygen species biosynthetic process	7.07E-04
53	GO:0015790: UDP-xylose transport	7.07E-04
54	GO:0030388: fructose 1,6-bisphosphate metabolic process	7.07E-04
55	GO:0042819: vitamin B6 biosynthetic process	7.07E-04
56	GO:0080005: photosystem stoichiometry adjustment	7.07E-04
57	GO:0009773: photosynthetic electron transport in photosystem I	7.96E-04
58	GO:0006790: sulfur compound metabolic process	9.08E-04
59	GO:0006000: fructose metabolic process	1.15E-03
60	GO:0034051: negative regulation of plant-type hypersensitive response	1.15E-03
61	GO:0046168: glycerol-3-phosphate catabolic process	1.15E-03
62	GO:0010160: formation of animal organ boundary	1.15E-03
63	GO:0044375: regulation of peroxisome size	1.15E-03
64	GO:0046621: negative regulation of organ growth	1.15E-03
65	GO:0000913: preprophase band assembly	1.15E-03
66	GO:0031022: nuclear migration along microfilament	1.15E-03
67	GO:0019253: reductive pentose-phosphate cycle	1.16E-03
68	GO:0046854: phosphatidylinositol phosphorylation	1.29E-03
69	GO:0016051: carbohydrate biosynthetic process	1.35E-03
70	GO:0009637: response to blue light	1.35E-03
71	GO:0006636: unsaturated fatty acid biosynthetic process	1.44E-03
72	GO:0006072: glycerol-3-phosphate metabolic process	1.65E-03
73	GO:0008615: pyridoxine biosynthetic process	1.65E-03
74	GO:0042823: pyridoxal phosphate biosynthetic process	1.65E-03
75	GO:2001141: regulation of RNA biosynthetic process	1.65E-03
76	GO:0010258: NADH dehydrogenase complex (plastoquinone) assembly	1.65E-03
77	GO:0010371: regulation of gibberellin biosynthetic process	1.65E-03
78	GO:0006020: inositol metabolic process	1.65E-03
79	GO:0009152: purine ribonucleotide biosynthetic process	1.65E-03
80	GO:0046653: tetrahydrofolate metabolic process	1.65E-03
81	GO:0010239: chloroplast mRNA processing	1.65E-03
82	GO:0009650: UV protection	1.65E-03
83	GO:0043481: anthocyanin accumulation in tissues in response to UV light	1.65E-03
84	GO:0006631: fatty acid metabolic process	1.68E-03
85	GO:0016226: iron-sulfur cluster assembly	2.11E-03
86	GO:0010600: regulation of auxin biosynthetic process	2.21E-03
87	GO:0010021: amylopectin biosynthetic process	2.21E-03
88	GO:2000306: positive regulation of photomorphogenesis	2.21E-03
89	GO:0015994: chlorophyll metabolic process	2.21E-03
90	GO:0045038: protein import into chloroplast thylakoid membrane	2.82E-03
91	GO:0009107: lipoate biosynthetic process	2.82E-03
92	GO:0006465: signal peptide processing	2.82E-03
93	GO:0006520: cellular amino acid metabolic process	3.16E-03
94	GO:0006096: glycolytic process	3.37E-03
95	GO:0045962: positive regulation of development, heterochronic	3.49E-03
96	GO:0009920: cell plate formation involved in plant-type cell wall biogenesis	3.49E-03
97	GO:0009228: thiamine biosynthetic process	3.49E-03
98	GO:0042549: photosystem II stabilization	3.49E-03
99	GO:0019288: isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	3.49E-03
100	GO:0060918: auxin transport	3.49E-03
101	GO:0009791: post-embryonic development	3.64E-03
102	GO:0019252: starch biosynthetic process	3.64E-03
103	GO:0010244: response to low fluence blue light stimulus by blue low-fluence system	4.20E-03
104	GO:0010189: vitamin E biosynthetic process	4.20E-03
105	GO:1901259: chloroplast rRNA processing	4.20E-03
106	GO:0000054: ribosomal subunit export from nucleus	4.20E-03
107	GO:1900057: positive regulation of leaf senescence	4.95E-03
108	GO:0048437: floral organ development	4.95E-03
109	GO:0010161: red light signaling pathway	4.95E-03
110	GO:0005975: carbohydrate metabolic process	5.12E-03
111	GO:0044550: secondary metabolite biosynthetic process	5.32E-03
112	GO:0032508: DNA duplex unwinding	5.76E-03
113	GO:0042255: ribosome assembly	5.76E-03
114	GO:2000070: regulation of response to water deprivation	5.76E-03
115	GO:0006353: DNA-templated transcription, termination	5.76E-03
116	GO:0007155: cell adhesion	5.76E-03
117	GO:0048564: photosystem I assembly	5.76E-03
118	GO:0010928: regulation of auxin mediated signaling pathway	5.76E-03
119	GO:0007186: G-protein coupled receptor signaling pathway	6.60E-03
120	GO:0006526: arginine biosynthetic process	6.60E-03
121	GO:0009657: plastid organization	6.60E-03
122	GO:0009932: cell tip growth	6.60E-03
123	GO:0006002: fructose 6-phosphate metabolic process	6.60E-03
124	GO:0071482: cellular response to light stimulus	6.60E-03
125	GO:0015996: chlorophyll catabolic process	6.60E-03
126	GO:0018298: protein-chromophore linkage	7.35E-03
127	GO:0006098: pentose-phosphate shunt	7.48E-03
128	GO:0090333: regulation of stomatal closure	7.48E-03
129	GO:0048507: meristem development	7.48E-03
130	GO:0051865: protein autoubiquitination	7.48E-03
131	GO:0090305: nucleic acid phosphodiester bond hydrolysis	7.48E-03
132	GO:0006633: fatty acid biosynthetic process	7.61E-03
133	GO:0006811: ion transport	8.11E-03
134	GO:0048354: mucilage biosynthetic process involved in seed coat development	8.41E-03
135	GO:0009638: phototropism	8.41E-03
136	GO:0006535: cysteine biosynthetic process from serine	9.37E-03
137	GO:0043069: negative regulation of programmed cell death	9.37E-03
138	GO:0034599: cellular response to oxidative stress	9.76E-03
139	GO:0006352: DNA-templated transcription, initiation	1.04E-02
140	GO:0008285: negative regulation of cell proliferation	1.04E-02
141	GO:0018119: peptidyl-cysteine S-nitrosylation	1.04E-02
142	GO:0016485: protein processing	1.04E-02
143	GO:0006415: translational termination	1.04E-02
144	GO:0016024: CDP-diacylglycerol biosynthetic process	1.14E-02
145	GO:0045037: protein import into chloroplast stroma	1.14E-02
146	GO:0008361: regulation of cell size	1.14E-02
147	GO:0009640: photomorphogenesis	1.21E-02
148	GO:0009744: response to sucrose	1.21E-02
149	GO:0006006: glucose metabolic process	1.25E-02
150	GO:0009785: blue light signaling pathway	1.25E-02
151	GO:0018107: peptidyl-threonine phosphorylation	1.25E-02
152	GO:0009718: anthocyanin-containing compound biosynthetic process	1.25E-02
153	GO:0009725: response to hormone	1.25E-02
154	GO:0009767: photosynthetic electron transport chain	1.25E-02
155	GO:0005986: sucrose biosynthetic process	1.25E-02
156	GO:0030048: actin filament-based movement	1.25E-02
157	GO:0042546: cell wall biogenesis	1.26E-02
158	GO:0010020: chloroplast fission	1.36E-02
159	GO:0010540: basipetal auxin transport	1.36E-02
160	GO:0009266: response to temperature stimulus	1.36E-02
161	GO:0006810: transport	1.37E-02
162	GO:0019853: L-ascorbic acid biosynthetic process	1.48E-02
163	GO:0007031: peroxisome organization	1.48E-02
164	GO:0042343: indole glucosinolate metabolic process	1.48E-02
165	GO:0010025: wax biosynthetic process	1.60E-02
166	GO:0009833: plant-type primary cell wall biogenesis	1.60E-02
167	GO:0019344: cysteine biosynthetic process	1.72E-02
168	GO:0006857: oligopeptide transport	1.75E-02
169	GO:0009768: photosynthesis, light harvesting in photosystem I	1.84E-02
170	GO:0010073: meristem maintenance	1.84E-02
171	GO:0043086: negative regulation of catalytic activity	1.93E-02
172	GO:0016114: terpenoid biosynthetic process	1.97E-02
173	GO:0098542: defense response to other organism	1.97E-02
174	GO:0071555: cell wall organization	1.98E-02
175	GO:0009416: response to light stimulus	2.01E-02
176	GO:0030433: ubiquitin-dependent ERAD pathway	2.10E-02
177	GO:0080092: regulation of pollen tube growth	2.10E-02
178	GO:0010017: red or far-red light signaling pathway	2.10E-02
179	GO:0010227: floral organ abscission	2.23E-02
180	GO:0048443: stamen development	2.37E-02
181	GO:0009306: protein secretion	2.37E-02
182	GO:0019722: calcium-mediated signaling	2.37E-02
183	GO:0009561: megagametogenesis	2.37E-02
184	GO:0006817: phosphate ion transport	2.37E-02
185	GO:0006396: RNA processing	2.39E-02
186	GO:0000271: polysaccharide biosynthetic process	2.65E-02
187	GO:0042335: cuticle development	2.65E-02
188	GO:0010182: sugar mediated signaling pathway	2.80E-02
189	GO:0009741: response to brassinosteroid	2.80E-02
190	GO:0009958: positive gravitropism	2.80E-02
191	GO:0007018: microtubule-based movement	2.95E-02
192	GO:0009646: response to absence of light	2.95E-02
193	GO:0032259: methylation	3.04E-02
194	GO:0008654: phospholipid biosynthetic process	3.10E-02
195	GO:0000302: response to reactive oxygen species	3.25E-02
196	GO:0016032: viral process	3.41E-02
197	GO:0032502: developmental process	3.41E-02
198	GO:0007264: small GTPase mediated signal transduction	3.41E-02
199	GO:0009567: double fertilization forming a zygote and endosperm	3.73E-02
200	GO:0009639: response to red or far red light	3.73E-02
201	GO:0007267: cell-cell signaling	3.89E-02
202	GO:0007623: circadian rhythm	4.01E-02
203	GO:0000910: cytokinesis	4.06E-02
204	GO:0010228: vegetative to reproductive phase transition of meristem	4.19E-02
205	GO:0009788: negative regulation of abscisic acid-activated signaling pathway	4.40E-02
206	GO:0042128: nitrate assimilation	4.57E-02
207	GO:0010411: xyloglucan metabolic process	4.75E-02
208	GO:0016311: dephosphorylation	4.92E-02

Rank	GO Term	Adjusted P value
1	GO:0050278: sedoheptulose-bisphosphatase activity	0.00E+00
2	GO:0008942: nitrite reductase [NAD(P)H] activity	0.00E+00
3	GO:0052637: delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity	0.00E+00
4	GO:0046406: magnesium protoporphyrin IX methyltransferase activity	0.00E+00
5	GO:0009673: low-affinity phosphate transmembrane transporter activity	0.00E+00
6	GO:0003904: deoxyribodipyrimidine photo-lyase activity	0.00E+00
7	GO:0045550: geranylgeranyl reductase activity	0.00E+00
8	GO:0016491: oxidoreductase activity	5.71E-07
9	GO:0008934: inositol monophosphate 1-phosphatase activity	4.77E-06
10	GO:0052833: inositol monophosphate 4-phosphatase activity	4.77E-06
11	GO:0052832: inositol monophosphate 3-phosphatase activity	4.77E-06
12	GO:0000293: ferric-chelate reductase activity	1.52E-04
13	GO:0004332: fructose-bisphosphate aldolase activity	1.52E-04
14	GO:0008441: 3'(2'),5'-bisphosphate nucleotidase activity	2.07E-04
15	GO:0080132: fatty acid alpha-hydroxylase activity	3.24E-04
16	GO:0008124: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity	3.24E-04
17	GO:0004328: formamidase activity	3.24E-04
18	GO:0031957: very long-chain fatty acid-CoA ligase activity	3.24E-04
19	GO:0010347: L-galactose-1-phosphate phosphatase activity	3.24E-04
20	GO:0003942: N-acetyl-gamma-glutamyl-phosphate reductase activity	3.24E-04
21	GO:0009496: plastoquinol--plastocyanin reductase activity	3.24E-04
22	GO:0042802: identical protein binding	5.20E-04
23	GO:0043024: ribosomal small subunit binding	7.07E-04
24	GO:0005464: UDP-xylose transmembrane transporter activity	7.07E-04
25	GO:0008728: GTP diphosphokinase activity	7.07E-04
26	GO:0036381: pyridoxal 5'-phosphate synthase (glutamine hydrolysing) activity	7.07E-04
27	GO:0047100: glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity	7.07E-04
28	GO:0050017: L-3-cyanoalanine synthase activity	7.07E-04
29	GO:0048531: beta-1,3-galactosyltransferase activity	7.07E-04
30	GO:0080045: quercetin 3'-O-glucosyltransferase activity	7.07E-04
31	GO:0042389: omega-3 fatty acid desaturase activity	7.07E-04
32	GO:0009977: proton motive force dependent protein transmembrane transporter activity	7.07E-04
33	GO:0008661: 1-deoxy-D-xylulose-5-phosphate synthase activity	7.07E-04
34	GO:0033201: alpha-1,4-glucan synthase activity	7.07E-04
35	GO:0042132: fructose 1,6-bisphosphate 1-phosphatase activity	7.07E-04
36	GO:0018708: thiol S-methyltransferase activity	7.07E-04
37	GO:0004565: beta-galactosidase activity	1.03E-03
38	GO:0019843: rRNA binding	1.06E-03
39	GO:0050734: hydroxycinnamoyltransferase activity	1.15E-03
40	GO:0016992: lipoate synthase activity	1.15E-03
41	GO:0003913: DNA photolyase activity	1.15E-03
42	GO:0032947: protein complex scaffold	1.15E-03
43	GO:0030267: glyoxylate reductase (NADP) activity	1.15E-03
44	GO:0016742: hydroxymethyl-, formyl- and related transferase activity	1.15E-03
45	GO:0004367: glycerol-3-phosphate dehydrogenase [NAD+] activity	1.15E-03
46	GO:0008864: formyltetrahydrofolate deformylase activity	1.15E-03
47	GO:0016620: oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	1.15E-03
48	GO:0010277: chlorophyllide a oxygenase [overall] activity	1.15E-03
49	GO:0005504: fatty acid binding	1.15E-03
50	GO:0004373: glycogen (starch) synthase activity	1.15E-03
51	GO:0051536: iron-sulfur cluster binding	1.59E-03
52	GO:0016811: hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	1.65E-03
53	GO:0009882: blue light photoreceptor activity	1.65E-03
54	GO:0016628: oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	1.65E-03
55	GO:0016851: magnesium chelatase activity	1.65E-03
56	GO:0048027: mRNA 5'-UTR binding	1.65E-03
57	GO:0005506: iron ion binding	1.99E-03
58	GO:0047262: polygalacturonate 4-alpha-galacturonosyltransferase activity	2.11E-03
59	GO:0043495: protein anchor	2.21E-03
60	GO:0001053: plastid sigma factor activity	2.21E-03
61	GO:0016655: oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	2.21E-03
62	GO:0045430: chalcone isomerase activity	2.21E-03
63	GO:0016987: sigma factor activity	2.21E-03
64	GO:0009011: starch synthase activity	2.21E-03
65	GO:0003727: single-stranded RNA binding	2.50E-03
66	GO:0004130: cytochrome-c peroxidase activity	3.49E-03
67	GO:0035673: oligopeptide transmembrane transporter activity	3.49E-03
68	GO:0004366: glycerol-3-phosphate O-acyltransferase activity	3.49E-03
69	GO:0042578: phosphoric ester hydrolase activity	3.49E-03
70	GO:0090447: glycerol-3-phosphate 2-O-acyltransferase activity	3.49E-03
71	GO:0080046: quercetin 4'-O-glucosyltransferase activity	3.49E-03
72	GO:0004616: phosphogluconate dehydrogenase (decarboxylating) activity	4.20E-03
73	GO:0102391: decanoate--CoA ligase activity	4.20E-03
74	GO:0004124: cysteine synthase activity	4.20E-03
75	GO:0051920: peroxiredoxin activity	4.20E-03
76	GO:0016887: ATPase activity	4.60E-03
77	GO:0019899: enzyme binding	4.95E-03
78	GO:0004467: long-chain fatty acid-CoA ligase activity	4.95E-03
79	GO:0016209: antioxidant activity	5.76E-03
80	GO:0016168: chlorophyll binding	5.96E-03
81	GO:0016717: oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	6.60E-03
82	GO:0008135: translation factor activity, RNA binding	6.60E-03
83	GO:0071949: FAD binding	7.48E-03
84	GO:0003993: acid phosphatase activity	9.76E-03
85	GO:0005089: Rho guanyl-nucleotide exchange factor activity	1.04E-02
86	GO:0015198: oligopeptide transporter activity	1.14E-02
87	GO:0010329: auxin efflux transmembrane transporter activity	1.25E-02
88	GO:0005315: inorganic phosphate transmembrane transporter activity	1.25E-02
89	GO:0031072: heat shock protein binding	1.25E-02
90	GO:0000155: phosphorelay sensor kinase activity	1.25E-02
91	GO:0035091: phosphatidylinositol binding	1.31E-02
92	GO:0051537: 2 iron, 2 sulfur cluster binding	1.31E-02
93	GO:0042973: glucan endo-1,3-beta-D-glucosidase activity	1.36E-02
94	GO:0008266: poly(U) RNA binding	1.36E-02
95	GO:0003774: motor activity	1.36E-02
96	GO:0031624: ubiquitin conjugating enzyme binding	1.36E-02
97	GO:0005525: GTP binding	1.38E-02
98	GO:0003729: mRNA binding	1.41E-02
99	GO:0051287: NAD binding	1.46E-02
100	GO:0016788: hydrolase activity, acting on ester bonds	1.53E-02
101	GO:0031409: pigment binding	1.60E-02
102	GO:0003690: double-stranded DNA binding	1.69E-02
103	GO:0016760: cellulose synthase (UDP-forming) activity	2.23E-02
104	GO:0022891: substrate-specific transmembrane transporter activity	2.23E-02
105	GO:0016709: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	2.72E-02
106	GO:0005515: protein binding	2.76E-02
107	GO:0010181: FMN binding	2.95E-02
108	GO:0004872: receptor activity	3.10E-02
109	GO:0003924: GTPase activity	3.20E-02
110	GO:0030170: pyridoxal phosphate binding	3.23E-02
111	GO:0016762: xyloglucan:xyloglucosyl transferase activity	3.25E-02
112	GO:0048038: quinone binding	3.25E-02
113	GO:0004518: nuclease activity	3.41E-02
114	GO:0016791: phosphatase activity	3.73E-02
115	GO:0016759: cellulose synthase activity	3.73E-02
116	GO:0046910: pectinesterase inhibitor activity	3.74E-02
117	GO:0016722: oxidoreductase activity, oxidizing metal ions	3.89E-02
118	GO:0008017: microtubule binding	4.19E-02
119	GO:0016798: hydrolase activity, acting on glycosyl bonds	4.75E-02